RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 ARHGEF28Q8N1W1 1705 aaKnown RBP19.41■□□□□ 0.7
DDR1-244ENST00000482873 NLRP1Q9C000 1473 aa19.41■□□□□ 0.7
DDR1-244ENST00000482873 PLPPR3Q6T4P5 718 aa19.4■□□□□ 0.7
DDR1-244ENST00000482873 MAPK8IP3Q9UPT6 1336 aa19.4■□□□□ 0.7
DDR1-244ENST00000482873 BECN1Q14457 450 aa19.4■□□□□ 0.7
DDR1-244ENST00000482873 YTHDC2Q9H6S0 1430 aaKnown RBP19.4■□□□□ 0.7
DDR1-244ENST00000482873 TMPOP42166 694 aaKnown RBP19.39■□□□□ 0.7
DDR1-244ENST00000482873 NGEFQ8N5V2 710 aa19.39■□□□□ 0.7
DDR1-244ENST00000482873 ZRANB1Q9UGI0 708 aa19.39■□□□□ 0.7
DDR1-244ENST00000482873 HMOX1P09601 288 aa19.39■□□□□ 0.69
DDR1-244ENST00000482873 RIPK4P57078 832 aa19.39■□□□□ 0.69
DDR1-244ENST00000482873 ANTXR1Q9H6X2 564 aa19.38■□□□□ 0.69
DDR1-244ENST00000482873 MYH16Q9H6N6 1097 aa19.38■□□□□ 0.69
DDR1-244ENST00000482873 SMC4Q9NTJ3 1288 aa19.38■□□□□ 0.69
DDR1-244ENST00000482873 TRIM35Q9UPQ4 493 aa19.38■□□□□ 0.69
DDR1-244ENST00000482873 HDGFL2Q7Z4V5 671 aaPredicted RBP19.38■□□□□ 0.69
DDR1-244ENST00000482873 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
DDR1-244ENST00000482873 FTSJ3Q8IY81 847 aaKnown RBP19.37■□□□□ 0.69
DDR1-244ENST00000482873 PLEKHF1Q96S99 279 aa19.37■□□□□ 0.69
DDR1-244ENST00000482873 THUMPD2Q9BTF0 503 aaKnown RBP19.37■□□□□ 0.69
DDR1-244ENST00000482873 ABCC11Q96J66 1382 aa19.37■□□□□ 0.69
DDR1-244ENST00000482873 NUTM2FA1L443 756 aa19.37■□□□□ 0.69
DDR1-244ENST00000482873 TXNDC2Q86VQ3 553 aa19.37■□□□□ 0.69
DDR1-244ENST00000482873 RRAGDQ9NQL2 400 aaPredicted RBP19.37■□□□□ 0.69
DDR1-244ENST00000482873 RICTORQ6R327 1708 aa19.36■□□□□ 0.69
DDR1-244ENST00000482873 ARHGAP31Q2M1Z3 1444 aa19.36■□□□□ 0.69
DDR1-244ENST00000482873 DIAPH1O60610 1272 aaKnown RBP19.36■□□□□ 0.69
DDR1-244ENST00000482873 PTPRMP28827 1452 aa19.35■□□□□ 0.69
DDR1-244ENST00000482873 SSH1Q8WYL5 1049 aa19.35■□□□□ 0.69
DDR1-244ENST00000482873 ELL2O00472 640 aaPredicted RBP19.34■□□□□ 0.69
DDR1-244ENST00000482873 PDZRN3Q9UPQ7 1066 aa19.33■□□□□ 0.69
DDR1-244ENST00000482873 EMILIN1Q9Y6C2 1016 aa19.33■□□□□ 0.69
DDR1-244ENST00000482873 CCDC27Q2M243 656 aa19.33■□□□□ 0.68
DDR1-244ENST00000482873 ITPRIPQ8IWB1 547 aa19.33■□□□□ 0.68
DDR1-244ENST00000482873 PUS7Q96PZ0 661 aaKnown RBP19.32■□□□□ 0.68
DDR1-244ENST00000482873 TBC1D2Q9BYX2 928 aa19.32■□□□□ 0.68
DDR1-244ENST00000482873 ATAD2Q6PL18 1390 aa19.32■□□□□ 0.68
DDR1-244ENST00000482873 PRKAR2BP31323 418 aa19.32■□□□□ 0.68
DDR1-244ENST00000482873 NME9Q86XW9 330 aa19.32■□□□□ 0.68
DDR1-244ENST00000482873 CD163L1Q9NR16 1453 aa19.31■□□□□ 0.68
DDR1-244ENST00000482873 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
DDR1-244ENST00000482873 TBC1D32Q96NH3 1257 aa19.31■□□□□ 0.68
DDR1-244ENST00000482873 NOB1Q9ULX3 412 aaKnown RBP19.31■□□□□ 0.68
DDR1-244ENST00000482873 TMEM131LA2VDJ0 1609 aa19.31■□□□□ 0.68
DDR1-244ENST00000482873 NSD2O96028 1365 aa19.31■□□□□ 0.68
DDR1-244ENST00000482873 NINLQ9Y2I6 1382 aa19.31■□□□□ 0.68
DDR1-244ENST00000482873 TRIM27P14373 513 aa19.31■□□□□ 0.68
DDR1-244ENST00000482873 L1TD1Q5T7N2 865 aaKnown RBP19.31■□□□□ 0.68
DDR1-244ENST00000482873 DZIP1LQ8IYY4 767 aaKnown RBP19.31■□□□□ 0.68
DDR1-244ENST00000482873 PHACTR3Q96KR7 559 aa19.31■□□□□ 0.68
DDR1-244ENST00000482873 ARXQ96QS3 562 aa19.31■□□□□ 0.68
DDR1-244ENST00000482873 PREX1Q8TCU6 1659 aa19.3■□□□□ 0.68
DDR1-244ENST00000482873 POLKQ9UBT6 870 aa19.3■□□□□ 0.68
DDR1-244ENST00000482873 DIP2BQ9P265 1576 aa19.3■□□□□ 0.68
DDR1-244ENST00000482873 MVPQ14764 893 aaKnown RBP19.29■□□□□ 0.68
DDR1-244ENST00000482873 RRS1Q15050 365 aaKnown RBP19.29■□□□□ 0.68
DDR1-244ENST00000482873 UPF2Q9HAU5 1272 aaKnown RBP19.28■□□□□ 0.68
DDR1-244ENST00000482873 SOX12O15370 315 aa19.28■□□□□ 0.68
DDR1-244ENST00000482873 ZFYVE9O95405 1425 aa19.28■□□□□ 0.68
DDR1-244ENST00000482873 SPRYD3Q8NCJ5 442 aa19.28■□□□□ 0.68
DDR1-244ENST00000482873 PMFBP1Q8TBY8 1022 aa19.28■□□□□ 0.68
DDR1-244ENST00000482873 ESF1Q9H501 851 aaKnown RBP19.28■□□□□ 0.68
DDR1-244ENST00000482873 ALKQ9UM73 1620 aa19.27■□□□□ 0.68
DDR1-244ENST00000482873 XRCC6P12956 609 aaKnown RBP eCLIP19.27■□□□□ 0.67
DDR1-244ENST00000482873 TMEM57Q8N5G2 664 aa19.26■□□□□ 0.67
DDR1-244ENST00000482873 METP08581 1390 aa19.25■□□□□ 0.67
DDR1-244ENST00000482873 GLIPR1L2Q4G1C9 344 aa19.24■□□□□ 0.67
DDR1-244ENST00000482873 RWDD1Q9H446 243 aaPredicted RBP19.24■□□□□ 0.67
DDR1-244ENST00000482873 RIMS2Q9UQ26 1411 aa19.24■□□□□ 0.67
DDR1-244ENST00000482873 USP32Q8NFA0 1604 aa19.24■□□□□ 0.67
DDR1-244ENST00000482873 GZF1Q9H116 711 aaPredicted RBP19.23■□□□□ 0.67
DDR1-244ENST00000482873 ARHGEF40Q8TER5 1519 aa19.23■□□□□ 0.67
DDR1-244ENST00000482873 FAM83GA6ND36 823 aa19.23■□□□□ 0.67
DDR1-244ENST00000482873 DCTN1Q14203 1278 aa19.23■□□□□ 0.67
DDR1-244ENST00000482873 ATF7IPQ6VMQ6 1270 aa19.23■□□□□ 0.67
DDR1-244ENST00000482873 PANK2Q9BZ23 570 aa19.23■□□□□ 0.67
DDR1-244ENST00000482873 FSD2A1L4K1 749 aa19.22■□□□□ 0.67
DDR1-244ENST00000482873 TSPYL6Q8N831 410 aa19.22■□□□□ 0.67
DDR1-244ENST00000482873 COL3A1P02461 1466 aaPredicted RBP19.22■□□□□ 0.67
DDR1-244ENST00000482873 GOLGA6L3A6NEY3 463 aa19.22■□□□□ 0.67
DDR1-244ENST00000482873 MCM4P33991 863 aa19.22■□□□□ 0.67
DDR1-244ENST00000482873 WASLO00401 505 aaPredicted RBP19.21■□□□□ 0.67
DDR1-244ENST00000482873 C1orf115Q9H7X2 142 aa19.21■□□□□ 0.67
DDR1-244ENST00000482873 NUDT16Q96DE0 195 aaKnown RBP19.21■□□□□ 0.67
DDR1-244ENST00000482873 A2ML1A8K2U0 1454 aa19.21■□□□□ 0.67
DDR1-244ENST00000482873 ZMYM3Q14202 1370 aa19.2■□□□□ 0.66
DDR1-244ENST00000482873 AAMPQ13685 434 aa19.19■□□□□ 0.66
DDR1-244ENST00000482873 ZMYND15Q9H091 742 aa19.19■□□□□ 0.66
DDR1-244ENST00000482873 FCHSD2O94868 740 aa19.19■□□□□ 0.66
DDR1-244ENST00000482873 CLTCQ00610 1675 aaKnown RBP19.19■□□□□ 0.66
DDR1-244ENST00000482873 CEBPAP49715 358 aaPredicted RBP19.18■□□□□ 0.66
DDR1-244ENST00000482873 PPIP5K1Q6PFW1 1433 aa19.18■□□□□ 0.66
DDR1-244ENST00000482873 ADGRB2O60241 1585 aa19.16■□□□□ 0.66
DDR1-244ENST00000482873 MFAP1P55081 439 aaKnown RBP19.16■□□□□ 0.66
DDR1-244ENST00000482873 SLC26A8Q96RN1 970 aa19.16■□□□□ 0.66
DDR1-244ENST00000482873 COG3Q96JB2 828 aa19.15■□□□□ 0.66
DDR1-244ENST00000482873 C22orf23Q9BZE7 217 aa19.15■□□□□ 0.66
DDR1-244ENST00000482873 DDX19BQ9UMR2 479 aa19.15■□□□□ 0.66
DDR1-244ENST00000482873 PNPLA6Q8IY17 1366 aa19.15■□□□□ 0.66
DDR1-244ENST00000482873 TRAK2O60296 914 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms