RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 ADGRL3Q9HAR2 1447 aa29.26■■■□□ 2.28
RUNX1-216ENST00000482318 MAP2P11137 1827 aaKnown RBP29.26■■■□□ 2.27
RUNX1-216ENST00000482318 COG3Q96JB2 828 aa29.25■■■□□ 2.27
RUNX1-216ENST00000482318 NME9Q86XW9 330 aa29.25■■■□□ 2.27
RUNX1-216ENST00000482318 COL3A1P02461 1466 aaPredicted RBP29.24■■■□□ 2.27
RUNX1-216ENST00000482318 TTC21BQ7Z4L5 1316 aa29.24■■■□□ 2.27
RUNX1-216ENST00000482318 AATKQ6ZMQ8 1374 aa29.24■■■□□ 2.27
RUNX1-216ENST00000482318 FKBP8Q14318 412 aa29.23■■■□□ 2.27
RUNX1-216ENST00000482318 PNPLA6Q8IY17 1366 aa29.22■■■□□ 2.27
RUNX1-216ENST00000482318 TTC21AQ8NDW8 1320 aa29.21■■■□□ 2.27
RUNX1-216ENST00000482318 CCDC146Q8IYE0 955 aa29.21■■■□□ 2.27
RUNX1-216ENST00000482318 SSH2Q76I76 1423 aa29.2■■■□□ 2.26
RUNX1-216ENST00000482318 NGDNQ8NEJ9 315 aaKnown RBP29.2■■■□□ 2.26
RUNX1-216ENST00000482318 RUNDC1Q96C34 613 aa29.18■■■□□ 2.26
RUNX1-216ENST00000482318 APAF1O14727 1248 aa29.17■■■□□ 2.26
RUNX1-216ENST00000482318 PMFBP1Q8TBY8 1022 aa29.17■■■□□ 2.26
RUNX1-216ENST00000482318 KDM4FA0A1W2PPD8 638 aa29.17■■■□□ 2.26
RUNX1-216ENST00000482318 POLKQ9UBT6 870 aa29.17■■■□□ 2.26
RUNX1-216ENST00000482318 OVOS2A0A0J9YW53 1432 aa29.16■■■□□ 2.26
RUNX1-216ENST00000482318 OVOS2Q6IE36 1432 aa29.16■■■□□ 2.26
RUNX1-216ENST00000482318 ZNF521Q96K83 1311 aa29.16■■■□□ 2.26
RUNX1-216ENST00000482318 CDK12Q9NYV4 1490 aaPredicted RBP29.16■■■□□ 2.26
RUNX1-216ENST00000482318 DIAPH1O60610 1272 aaKnown RBP29.15■■■□□ 2.26
RUNX1-216ENST00000482318 U2AF1L5P0DN76 240 aaPredicted RBP29.15■■■□□ 2.26
RUNX1-216ENST00000482318 U2AF1Q01081 240 aaKnown RBP eCLIP29.15■■■□□ 2.262e-7■■■■□ 21.8
RUNX1-216ENST00000482318 C14orf37Q86TY3 774 aa29.13■■■□□ 2.25
RUNX1-216ENST00000482318 ZRANB1Q9UGI0 708 aa29.13■■■□□ 2.25
RUNX1-216ENST00000482318 IQSEC2Q5JU85 1478 aa29.13■■■□□ 2.25
RUNX1-216ENST00000482318 GOLGA2Q08379 1002 aa29.11■■■□□ 2.25
RUNX1-216ENST00000482318 NCBP3Q53F19 620 aaKnown RBP29.1■■■□□ 2.25
RUNX1-216ENST00000482318 ERICH6BQ5W0A0 696 aa29.1■■■□□ 2.25
RUNX1-216ENST00000482318 PROSER2Q86WR7 435 aaPredicted RBP29.1■■■□□ 2.25
RUNX1-216ENST00000482318 CDCA7LQ96GN5 454 aa29.1■■■□□ 2.25
RUNX1-216ENST00000482318 PNNQ9H307 717 aaKnown RBP29.1■■■□□ 2.25
RUNX1-216ENST00000482318 LMTK3Q96Q04 1460 aa29.1■■■□□ 2.25
RUNX1-216ENST00000482318 U2SURPO15042 1029 aaKnown RBP29.09■■■□□ 2.25
RUNX1-216ENST00000482318 USP31Q70CQ4 1352 aa29.08■■■□□ 2.25
RUNX1-216ENST00000482318 PPM1GO15355 546 aaPredicted RBP29.08■■■□□ 2.25
RUNX1-216ENST00000482318 PHF8Q9UPP1 1060 aa29.08■■■□□ 2.25
RUNX1-216ENST00000482318 PIK3C2AO00443 1686 aa29.07■■■□□ 2.24
RUNX1-216ENST00000482318 USP54Q70EL1 1684 aa29.07■■■□□ 2.24
RUNX1-216ENST00000482318 RBM33Q96EV2 1170 aaKnown RBP29.07■■■□□ 2.24
RUNX1-216ENST00000482318 RNF123Q5XPI4 1314 aa29.07■■■□□ 2.24
RUNX1-216ENST00000482318 EMILIN1Q9Y6C2 1016 aa29.06■■■□□ 2.24
RUNX1-216ENST00000482318 HSPA2P54652 639 aa29.06■■■□□ 2.24
RUNX1-216ENST00000482318 TCP11L2Q8N4U5 519 aa29.06■■■□□ 2.24
RUNX1-216ENST00000482318 NCOA3Q9Y6Q9 1424 aa29.05■■■□□ 2.24
RUNX1-216ENST00000482318 LRRC7Q96NW7 1537 aa29.04■■■□□ 2.24
RUNX1-216ENST00000482318 FBLN1P23142 703 aa29.03■■■□□ 2.24
RUNX1-216ENST00000482318 STRCP1A6NGW2 1772 aa29.03■■■□□ 2.24
RUNX1-216ENST00000482318 RCAN3Q9UKA8 241 aa29.03■■■□□ 2.24
RUNX1-216ENST00000482318 CCDC27Q2M243 656 aa29.02■■■□□ 2.24
RUNX1-216ENST00000482318 C19orf44Q9H6X5 657 aa29.01■■■□□ 2.23
RUNX1-216ENST00000482318 STRCQ7RTU9 1775 aa29■■■□□ 2.23
RUNX1-216ENST00000482318 MAPK8IP3Q9UPT6 1336 aa29■■■□□ 2.23
RUNX1-216ENST00000482318 SLFN5Q08AF3 891 aa29■■■□□ 2.23
RUNX1-216ENST00000482318 RRS1Q15050 365 aaKnown RBP29■■■□□ 2.23
RUNX1-216ENST00000482318 E9PSI1 815 aa29■■■□□ 2.23
RUNX1-216ENST00000482318 FCHSD2O94868 740 aa29■■■□□ 2.23
RUNX1-216ENST00000482318 WWC1Q8IX03 1113 aa29■■■□□ 2.23
RUNX1-216ENST00000482318 DCCP43146 1447 aa28.99■■■□□ 2.23
RUNX1-216ENST00000482318 ESCO1Q5FWF5 840 aa28.99■■■□□ 2.23
RUNX1-216ENST00000482318 DUSP27Q5VZP5 1158 aa28.99■■■□□ 2.23
RUNX1-216ENST00000482318 PLEKHF1Q96S99 279 aa28.99■■■□□ 2.23
RUNX1-216ENST00000482318 KIF1AQ12756 1690 aa28.99■■■□□ 2.23
RUNX1-216ENST00000482318 PHF23Q9BUL5 403 aaPredicted RBP28.98■■■□□ 2.23
RUNX1-216ENST00000482318 IL13P35225 146 aa28.97■■■□□ 2.23
RUNX1-216ENST00000482318 TRMT2AQ8IZ69 625 aaKnown RBP28.97■■■□□ 2.23
RUNX1-216ENST00000482318 MARF1Q9Y4F3 1742 aaKnown RBP28.96■■■□□ 2.23
RUNX1-216ENST00000482318 NEFMP07197 916 aa28.96■■■□□ 2.23
RUNX1-216ENST00000482318 IRX6P78412 446 aaPredicted RBP28.96■■■□□ 2.23
RUNX1-216ENST00000482318 TMEM94Q12767 1356 aa28.95■■■□□ 2.23
RUNX1-216ENST00000482318 NLRP6P59044 892 aa28.94■■■□□ 2.22
RUNX1-216ENST00000482318 WDR63Q8IWG1 891 aa28.94■■■□□ 2.22
RUNX1-216ENST00000482318 NEUROD2Q15784 382 aa28.94■■■□□ 2.22
RUNX1-216ENST00000482318 PEAK1Q9H792 1746 aa28.93■■■□□ 2.22
RUNX1-216ENST00000482318 RRP7AQ9Y3A4 280 aaKnown RBP28.93■■■□□ 2.22
RUNX1-216ENST00000482318 PAK3O75914 559 aaPredicted RBP28.92■■■□□ 2.22
RUNX1-216ENST00000482318 PSME1Q06323 249 aa28.92■■■□□ 2.22
RUNX1-216ENST00000482318 ABTB2Q8N961 1025 aa28.92■■■□□ 2.22
RUNX1-216ENST00000482318 C1orf167Q5SNV9 1468 aa28.92■■■□□ 2.22
RUNX1-216ENST00000482318 RSPH6AQ9H0K4 717 aa28.91■■■□□ 2.22
RUNX1-216ENST00000482318 SBNO1A3KN83 1393 aa28.9■■■□□ 2.22
RUNX1-216ENST00000482318 KIF24Q5T7B8 1368 aa28.9■■■□□ 2.22
RUNX1-216ENST00000482318 ATF3P18847 181 aa28.9■■■□□ 2.22
RUNX1-216ENST00000482318 RRP1P56182 461 aaKnown RBP28.9■■■□□ 2.22
RUNX1-216ENST00000482318 TMPOP42166 694 aaKnown RBP28.89■■■□□ 2.22
RUNX1-216ENST00000482318 FLT4P35916 1363 aa28.89■■■□□ 2.22
RUNX1-216ENST00000482318 PELP1Q8IZL8 1130 aaKnown RBP28.88■■■□□ 2.21
RUNX1-216ENST00000482318 PRKAR2BP31323 418 aa28.87■■■□□ 2.21
RUNX1-216ENST00000482318 MAP3K19Q56UN5 1328 aa28.87■■■□□ 2.21
RUNX1-216ENST00000482318 ORAI2Q96SN7 254 aa28.86■■■□□ 2.21
RUNX1-216ENST00000482318 SPINK5Q9NQ38 1064 aaPredicted RBP28.86■■■□□ 2.21
RUNX1-216ENST00000482318 MST1RQ04912 1400 aa28.85■■■□□ 2.21
RUNX1-216ENST00000482318 SOX12O15370 315 aa28.85■■■□□ 2.21
RUNX1-216ENST00000482318 PPP4R2Q9NY27 417 aa28.85■■■□□ 2.21
RUNX1-216ENST00000482318 RGPD1P0DJD0 1748 aa28.85■■■□□ 2.21
RUNX1-216ENST00000482318 EIF4A2Q14240 407 aaKnown RBP28.84■■■□□ 2.21
RUNX1-216ENST00000482318 CADPS2Q86UW7 1296 aa28.84■■■□□ 2.21
RUNX1-216ENST00000482318 DMRT2Q9Y5R5 561 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms