RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
IFT88-206ENST00000482172 PMFBP1Q8TBY8 1022 aa16.99■□□□□ 0.31
IFT88-206ENST00000482172 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
IFT88-206ENST00000482172 FYB1O15117 783 aa16.98■□□□□ 0.31
IFT88-206ENST00000482172 TTC21AQ8NDW8 1320 aa16.97■□□□□ 0.31
IFT88-206ENST00000482172 TTC21BQ7Z4L5 1316 aa16.96■□□□□ 0.31
IFT88-206ENST00000482172 KIF20BQ96Q89 1820 aa16.96■□□□□ 0.31
IFT88-206ENST00000482172 ORAI2Q96SN7 254 aa16.96■□□□□ 0.31
IFT88-206ENST00000482172 ANKRD26Q9UPS8 1709 aa16.96■□□□□ 0.3
IFT88-206ENST00000482172 MORC1Q86VD1 984 aa16.94■□□□□ 0.3
IFT88-206ENST00000482172 NLRP13Q86W25 1043 aa16.94■□□□□ 0.3
IFT88-206ENST00000482172 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
IFT88-206ENST00000482172 CNGB1Q14028 1251 aaPredicted RBP16.93■□□□□ 0.3
IFT88-206ENST00000482172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
IFT88-206ENST00000482172 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
IFT88-206ENST00000482172 PSME1Q06323 249 aa16.92■□□□□ 0.3
IFT88-206ENST00000482172 GGNBP2Q9H3C7 697 aa16.92■□□□□ 0.3
IFT88-206ENST00000482172 USP31Q70CQ4 1352 aa16.91■□□□□ 0.3
IFT88-206ENST00000482172 NME9Q86XW9 330 aa16.9■□□□□ 0.3
IFT88-206ENST00000482172 COG3Q96JB2 828 aa16.9■□□□□ 0.3
IFT88-206ENST00000482172 IQSEC2Q5JU85 1478 aa16.9■□□□□ 0.3
IFT88-206ENST00000482172 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
IFT88-206ENST00000482172 FOXO3O43524 673 aa16.89■□□□□ 0.29
IFT88-206ENST00000482172 BRINP3Q76B58 766 aa16.89■□□□□ 0.29
IFT88-206ENST00000482172 OVOS2A0A0J9YW53 1432 aa16.88■□□□□ 0.29
IFT88-206ENST00000482172 OVOS2Q6IE36 1432 aa16.88■□□□□ 0.29
IFT88-206ENST00000482172 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
IFT88-206ENST00000482172 KRT28Q7Z3Y7 464 aa16.88■□□□□ 0.29
IFT88-206ENST00000482172 MRS2Q9HD23 443 aa16.88■□□□□ 0.29
IFT88-206ENST00000482172 SBNO1A3KN83 1393 aa16.87■□□□□ 0.29
IFT88-206ENST00000482172 AATKQ6ZMQ8 1374 aa16.87■□□□□ 0.29
IFT88-206ENST00000482172 TRPM3Q9HCF6 1732 aaPredicted RBP16.87■□□□□ 0.29
IFT88-206ENST00000482172 PIK3C2AO00443 1686 aa16.86■□□□□ 0.29
IFT88-206ENST00000482172 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
IFT88-206ENST00000482172 ABTB2Q8N961 1025 aa16.85■□□□□ 0.29
IFT88-206ENST00000482172 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
IFT88-206ENST00000482172 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
IFT88-206ENST00000482172 PXDNQ92626 1479 aa16.84■□□□□ 0.29
IFT88-206ENST00000482172 SOS2Q07890 1332 aaPredicted RBP16.82■□□□□ 0.28
IFT88-206ENST00000482172 TOM1O60784 492 aa16.82■□□□□ 0.28
IFT88-206ENST00000482172 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
IFT88-206ENST00000482172 NLRP6P59044 892 aa16.82■□□□□ 0.28
IFT88-206ENST00000482172 NHSL1Q5SYE7 1610 aa16.81■□□□□ 0.28
IFT88-206ENST00000482172 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
IFT88-206ENST00000482172 MTHFSP49914 203 aa16.81■□□□□ 0.28
IFT88-206ENST00000482172 PNISRQ8TF01 805 aaKnown RBP16.81■□□□□ 0.28
IFT88-206ENST00000482172 ALS2Q96Q42 1657 aa16.81■□□□□ 0.28
IFT88-206ENST00000482172 MARF1Q9Y4F3 1742 aaKnown RBP16.8■□□□□ 0.28
IFT88-206ENST00000482172 XPCQ01831 940 aaPredicted RBP16.8■□□□□ 0.28
IFT88-206ENST00000482172 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
IFT88-206ENST00000482172 TNS3Q68CZ2 1445 aa16.79■□□□□ 0.28
IFT88-206ENST00000482172 INSRP06213 1382 aa16.79■□□□□ 0.28
IFT88-206ENST00000482172 SPATA31A3Q5VYP0 1347 aa16.79■□□□□ 0.28
IFT88-206ENST00000482172 POLKQ9UBT6 870 aa16.79■□□□□ 0.28
IFT88-206ENST00000482172 ARHGEF10O15013 1369 aa16.78■□□□□ 0.28
IFT88-206ENST00000482172 PNPLA6Q8IY17 1366 aa16.78■□□□□ 0.28
IFT88-206ENST00000482172 KCNH5Q8NCM2 988 aa16.78■□□□□ 0.28
IFT88-206ENST00000482172 CERKQ8TCT0 537 aa16.78■□□□□ 0.28
IFT88-206ENST00000482172 DDX17Q92841 729 aaKnown RBP16.78■□□□□ 0.28
IFT88-206ENST00000482172 ROBO1Q9Y6N7 1651 aa16.78■□□□□ 0.28
IFT88-206ENST00000482172 AHDC1Q5TGY3 1603 aaPredicted RBP16.78■□□□□ 0.28
IFT88-206ENST00000482172 USP19O94966 1318 aa16.77■□□□□ 0.28
IFT88-206ENST00000482172 SLIT3O75094 1523 aa16.77■□□□□ 0.28
IFT88-206ENST00000482172 MAP2P11137 1827 aaKnown RBP16.77■□□□□ 0.27
IFT88-206ENST00000482172 KIF24Q5T7B8 1368 aa16.77■□□□□ 0.27
IFT88-206ENST00000482172 CDK12Q9NYV4 1490 aaPredicted RBP16.76■□□□□ 0.27
IFT88-206ENST00000482172 NUTM2GQ5VZR2 741 aa16.75■□□□□ 0.27
IFT88-206ENST00000482172 MED1Q15648 1581 aaPredicted RBP16.74■□□□□ 0.27
IFT88-206ENST00000482172 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
IFT88-206ENST00000482172 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
IFT88-206ENST00000482172 FBLN1P23142 703 aa16.73■□□□□ 0.27
IFT88-206ENST00000482172 LMOD2Q6P5Q4 547 aa16.73■□□□□ 0.27
IFT88-206ENST00000482172 EMILIN1Q9Y6C2 1016 aa16.73■□□□□ 0.27
IFT88-206ENST00000482172 NFAT5O94916 1531 aa16.73■□□□□ 0.27
IFT88-206ENST00000482172 UBAP1LF5GYI3 381 aa16.72■□□□□ 0.27
IFT88-206ENST00000482172 GCP02774 474 aa16.72■□□□□ 0.27
IFT88-206ENST00000482172 RRS1Q15050 365 aaKnown RBP16.72■□□□□ 0.27
IFT88-206ENST00000482172 WDR43Q15061 677 aaKnown RBP eCLIP16.72■□□□□ 0.27
IFT88-206ENST00000482172 MAP3K19Q56UN5 1328 aa16.71■□□□□ 0.27
IFT88-206ENST00000482172 LRRC59Q96AG4 307 aaKnown RBP16.71■□□□□ 0.27
IFT88-206ENST00000482172 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
IFT88-206ENST00000482172 RTL1A6NKG5 1358 aa16.71■□□□□ 0.27
IFT88-206ENST00000482172 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
IFT88-206ENST00000482172 FLT4P35916 1363 aa16.7■□□□□ 0.26
IFT88-206ENST00000482172 DIAPH1O60610 1272 aaKnown RBP16.7■□□□□ 0.26
IFT88-206ENST00000482172 PHRF1Q9P1Y6 1649 aaKnown RBP16.7■□□□□ 0.26
IFT88-206ENST00000482172 PPM1GO15355 546 aaPredicted RBP16.69■□□□□ 0.26
IFT88-206ENST00000482172 CRYBG1Q9Y4K1 1723 aa16.69■□□□□ 0.26
IFT88-206ENST00000482172 PEAK1Q9H792 1746 aa16.68■□□□□ 0.26
IFT88-206ENST00000482172 SOX12O15370 315 aa16.68■□□□□ 0.26
IFT88-206ENST00000482172 AMPHP49418 695 aa16.68■□□□□ 0.26
IFT88-206ENST00000482172 ARHGEF25Q86VW2 580 aa16.68■□□□□ 0.26
IFT88-206ENST00000482172 ADAMTS8Q9UP79 889 aa16.68■□□□□ 0.26
IFT88-206ENST00000482172 IL13P35225 146 aa16.67■□□□□ 0.26
IFT88-206ENST00000482172 PHLPP1O60346 1717 aa16.66■□□□□ 0.26
IFT88-206ENST00000482172 BLMP54132 1417 aaPredicted RBP16.66■□□□□ 0.26
IFT88-206ENST00000482172 PIP4K2BP78356 416 aa16.66■□□□□ 0.26
IFT88-206ENST00000482172 IP6K1Q92551 441 aa16.66■□□□□ 0.26
IFT88-206ENST00000482172 LTN1O94822 1766 aa16.66■□□□□ 0.26
IFT88-206ENST00000482172 COL16A1Q07092 1604 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms