RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 NCKAP5LQ9HCH0 1330 aa15.49■□□□□ 0.07
GGPS1-205ENST00000482013 NALCNQ8IZF0 1738 aa15.49■□□□□ 0.07
GGPS1-205ENST00000482013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.49■□□□□ 0.07
GGPS1-205ENST00000482013 COG3Q96JB2 828 aa15.49■□□□□ 0.07
GGPS1-205ENST00000482013 SUPT16HQ9Y5B9 1047 aaKnown RBP15.49■□□□□ 0.07
GGPS1-205ENST00000482013 ADGRL3Q9HAR2 1447 aa15.49■□□□□ 0.07
GGPS1-205ENST00000482013 TTC21BQ7Z4L5 1316 aa15.48■□□□□ 0.07
GGPS1-205ENST00000482013 COL3A1P02461 1466 aaPredicted RBP15.48■□□□□ 0.07
GGPS1-205ENST00000482013 NKTRP30414 1462 aaKnown RBP15.48■□□□□ 0.07
GGPS1-205ENST00000482013 RUNDC1Q96C34 613 aa15.48■□□□□ 0.07
GGPS1-205ENST00000482013 SSH2Q76I76 1423 aa15.48■□□□□ 0.07
GGPS1-205ENST00000482013 PNNQ9H307 717 aaKnown RBP15.47■□□□□ 0.07
GGPS1-205ENST00000482013 ZNF521Q96K83 1311 aa15.46■□□□□ 0.07
GGPS1-205ENST00000482013 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.07
GGPS1-205ENST00000482013 NME9Q86XW9 330 aa15.46■□□□□ 0.07
GGPS1-205ENST00000482013 RNF123Q5XPI4 1314 aa15.45■□□□□ 0.06
GGPS1-205ENST00000482013 FKBP8Q14318 412 aa15.45■□□□□ 0.06
GGPS1-205ENST00000482013 POLKQ9UBT6 870 aa15.45■□□□□ 0.06
GGPS1-205ENST00000482013 APAF1O14727 1248 aa15.44■□□□□ 0.06
GGPS1-205ENST00000482013 DIAPH1O60610 1272 aaKnown RBP15.44■□□□□ 0.06
GGPS1-205ENST00000482013 NGDNQ8NEJ9 315 aaKnown RBP15.44■□□□□ 0.06
GGPS1-205ENST00000482013 USP31Q70CQ4 1352 aa15.44■□□□□ 0.06
GGPS1-205ENST00000482013 CDK12Q9NYV4 1490 aaPredicted RBP15.44■□□□□ 0.06
GGPS1-205ENST00000482013 USP54Q70EL1 1684 aa15.44■□□□□ 0.06
GGPS1-205ENST00000482013 OVOS2A0A0J9YW53 1432 aa15.43■□□□□ 0.06
GGPS1-205ENST00000482013 OVOS2Q6IE36 1432 aa15.43■□□□□ 0.06
GGPS1-205ENST00000482013 GOLGA2Q08379 1002 aa15.43■□□□□ 0.06
GGPS1-205ENST00000482013 IQSEC2Q5JU85 1478 aa15.42■□□□□ 0.06
GGPS1-205ENST00000482013 KDM4FA0A1W2PPD8 638 aa15.42■□□□□ 0.06
GGPS1-205ENST00000482013 CCDC27Q2M243 656 aa15.42■□□□□ 0.06
GGPS1-205ENST00000482013 CCDC146Q8IYE0 955 aa15.42■□□□□ 0.06
GGPS1-205ENST00000482013 LRRC7Q96NW7 1537 aa15.42■□□□□ 0.06
GGPS1-205ENST00000482013 NUTM2FA1L443 756 aa15.41■□□□□ 0.06
GGPS1-205ENST00000482013 U2AF1L5P0DN76 240 aaPredicted RBP15.41■□□□□ 0.06
GGPS1-205ENST00000482013 U2AF1Q01081 240 aaKnown RBP eCLIP15.41■□□□□ 0.06
GGPS1-205ENST00000482013 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
GGPS1-205ENST00000482013 FCHSD2O94868 740 aa15.4■□□□□ 0.06
GGPS1-205ENST00000482013 PROSER2Q86WR7 435 aaPredicted RBP15.4■□□□□ 0.06
GGPS1-205ENST00000482013 TRMT2AQ8IZ69 625 aaKnown RBP15.4■□□□□ 0.06
GGPS1-205ENST00000482013 PMFBP1Q8TBY8 1022 aa15.4■□□□□ 0.06
GGPS1-205ENST00000482013 PHF8Q9UPP1 1060 aa15.4■□□□□ 0.06
GGPS1-205ENST00000482013 SLFN5Q08AF3 891 aa15.38■□□□□ 0.05
GGPS1-205ENST00000482013 WDR63Q8IWG1 891 aa15.38■□□□□ 0.05
GGPS1-205ENST00000482013 TCP11L2Q8N4U5 519 aa15.38■□□□□ 0.05
GGPS1-205ENST00000482013 CDCA7LQ96GN5 454 aa15.38■□□□□ 0.05
GGPS1-205ENST00000482013 ZRANB1Q9UGI0 708 aa15.38■□□□□ 0.05
GGPS1-205ENST00000482013 DCCP43146 1447 aa15.37■□□□□ 0.05
GGPS1-205ENST00000482013 E9PSI1 815 aa15.37■□□□□ 0.05
GGPS1-205ENST00000482013 PLEKHF1Q96S99 279 aa15.37■□□□□ 0.05
GGPS1-205ENST00000482013 C19orf44Q9H6X5 657 aa15.37■□□□□ 0.05
GGPS1-205ENST00000482013 RCAN3Q9UKA8 241 aa15.37■□□□□ 0.05
GGPS1-205ENST00000482013 LMTK3Q96Q04 1460 aa15.37■□□□□ 0.05
GGPS1-205ENST00000482013 PIK3C2AO00443 1686 aa15.36■□□□□ 0.05
GGPS1-205ENST00000482013 SENP3-EIF4A1A0A087X0R7 540 aa15.36■□□□□ 0.05
GGPS1-205ENST00000482013 U2SURPO15042 1029 aaKnown RBP15.36■□□□□ 0.05
GGPS1-205ENST00000482013 DUSP27Q5VZP5 1158 aa15.36■□□□□ 0.05
GGPS1-205ENST00000482013 C14orf37Q86TY3 774 aa15.36■□□□□ 0.05
GGPS1-205ENST00000482013 WWC1Q8IX03 1113 aa15.36■□□□□ 0.05
GGPS1-205ENST00000482013 KIF24Q5T7B8 1368 aa15.36■□□□□ 0.05
GGPS1-205ENST00000482013 KIF1AQ12756 1690 aa15.35■□□□□ 0.05
GGPS1-205ENST00000482013 IL13P35225 146 aa15.35■□□□□ 0.05
GGPS1-205ENST00000482013 EMILIN1Q9Y6C2 1016 aa15.35■□□□□ 0.05
GGPS1-205ENST00000482013 STRCP1A6NGW2 1772 aa15.34■□□□□ 0.05
GGPS1-205ENST00000482013 STRCQ7RTU9 1775 aa15.34■□□□□ 0.05
GGPS1-205ENST00000482013 MAPK8IP3Q9UPT6 1336 aa15.34■□□□□ 0.05
GGPS1-205ENST00000482013 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
GGPS1-205ENST00000482013 NEFMP07197 916 aa15.33■□□□□ 0.04
GGPS1-205ENST00000482013 MARF1Q9Y4F3 1742 aaKnown RBP15.32■□□□□ 0.04
GGPS1-205ENST00000482013 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
GGPS1-205ENST00000482013 FBLN1P23142 703 aa15.31■□□□□ 0.04
GGPS1-205ENST00000482013 TMPOP42166 694 aaKnown RBP15.31■□□□□ 0.04
GGPS1-205ENST00000482013 HSPA2P54652 639 aa15.31■□□□□ 0.04
GGPS1-205ENST00000482013 NLRP6P59044 892 aa15.31■□□□□ 0.04
GGPS1-205ENST00000482013 RRS1Q15050 365 aaKnown RBP15.31■□□□□ 0.04
GGPS1-205ENST00000482013 ESCO1Q5FWF5 840 aa15.31■□□□□ 0.04
GGPS1-205ENST00000482013 RSPH6AQ9H0K4 717 aa15.31■□□□□ 0.04
GGPS1-205ENST00000482013 PPP4R2Q9NY27 417 aa15.31■□□□□ 0.04
GGPS1-205ENST00000482013 SBNO1A3KN83 1393 aa15.31■□□□□ 0.04
GGPS1-205ENST00000482013 RRP1P56182 461 aaKnown RBP15.3■□□□□ 0.04
GGPS1-205ENST00000482013 PSME1Q06323 249 aa15.3■□□□□ 0.04
GGPS1-205ENST00000482013 IL16Q14005 1332 aa15.3■□□□□ 0.04
GGPS1-205ENST00000482013 C1orf167Q5SNV9 1468 aa15.3■□□□□ 0.04
GGPS1-205ENST00000482013 PEAK1Q9H792 1746 aa15.29■□□□□ 0.04
GGPS1-205ENST00000482013 FLT4P35916 1363 aa15.29■□□□□ 0.04
GGPS1-205ENST00000482013 TMEM94Q12767 1356 aa15.29■□□□□ 0.04
GGPS1-205ENST00000482013 ATF3P18847 181 aa15.29■□□□□ 0.04
GGPS1-205ENST00000482013 ABTB2Q8N961 1025 aa15.29■□□□□ 0.04
GGPS1-205ENST00000482013 RBM33Q96EV2 1170 aaKnown RBP15.29■□□□□ 0.04
GGPS1-205ENST00000482013 MST1RQ04912 1400 aa15.28■□□□□ 0.04
GGPS1-205ENST00000482013 CADPS2Q86UW7 1296 aa15.28■□□□□ 0.04
GGPS1-205ENST00000482013 RGPD1P0DJD0 1748 aa15.28■□□□□ 0.04
GGPS1-205ENST00000482013 MAP3K19Q56UN5 1328 aa15.27■□□□□ 0.04
GGPS1-205ENST00000482013 MYH16Q9H6N6 1097 aa15.27■□□□□ 0.04
GGPS1-205ENST00000482013 TRPM3Q9HCF6 1732 aaPredicted RBP15.26■□□□□ 0.03
GGPS1-205ENST00000482013 RTL1A6NKG5 1358 aa15.26■□□□□ 0.03
GGPS1-205ENST00000482013 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
GGPS1-205ENST00000482013 EIF4A2Q14240 407 aaKnown RBP15.26■□□□□ 0.03
GGPS1-205ENST00000482013 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
GGPS1-205ENST00000482013 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.26■□□□□ 0.03
GGPS1-205ENST00000482013 KCNH5Q8NCM2 988 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms