RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 NPHP3Q7Z494 1330 aa15.9■□□□□ 0.14
HPS4-212ENST00000481910 XPCQ01831 940 aaPredicted RBP15.9■□□□□ 0.14
HPS4-212ENST00000481910 CARD14Q9BXL6 1004 aa15.89■□□□□ 0.13
HPS4-212ENST00000481910 AKAP12Q02952 1782 aa15.89■□□□□ 0.13
HPS4-212ENST00000481910 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
HPS4-212ENST00000481910 USP6P35125 1406 aa15.88■□□□□ 0.13
HPS4-212ENST00000481910 ZBTB22O15209 634 aa15.87■□□□□ 0.13
HPS4-212ENST00000481910 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
HPS4-212ENST00000481910 KNSTRNQ9Y448 316 aa15.87■□□□□ 0.13
HPS4-212ENST00000481910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.86■□□□□ 0.13
HPS4-212ENST00000481910 PER1O15534 1290 aaPredicted RBP15.86■□□□□ 0.13
HPS4-212ENST00000481910 MON2Q7Z3U7 1717 aa15.85■□□□□ 0.13
HPS4-212ENST00000481910 NSD3Q9BZ95 1437 aa15.85■□□□□ 0.13
HPS4-212ENST00000481910 EDC4Q6P2E9 1401 aaKnown RBP15.84■□□□□ 0.13
HPS4-212ENST00000481910 SOS2Q07890 1332 aaPredicted RBP15.84■□□□□ 0.13
HPS4-212ENST00000481910 TTC21BQ7Z4L5 1316 aa15.84■□□□□ 0.13
HPS4-212ENST00000481910 NHSL1Q5SYE7 1610 aa15.83■□□□□ 0.13
HPS4-212ENST00000481910 BRD4O60885 1362 aaPredicted RBP15.83■□□□□ 0.13
HPS4-212ENST00000481910 LMOD2Q6P5Q4 547 aa15.83■□□□□ 0.12
HPS4-212ENST00000481910 CGNL1Q0VF96 1302 aa15.83■□□□□ 0.12
HPS4-212ENST00000481910 PXDNQ92626 1479 aa15.82■□□□□ 0.12
HPS4-212ENST00000481910 SSH2Q76I76 1423 aa15.82■□□□□ 0.12
HPS4-212ENST00000481910 TTC21AQ8NDW8 1320 aa15.82■□□□□ 0.12
HPS4-212ENST00000481910 ABTB2Q8N961 1025 aa15.82■□□□□ 0.12
HPS4-212ENST00000481910 UBE2Q2Q8WVN8 375 aa15.82■□□□□ 0.12
HPS4-212ENST00000481910 AHDC1Q5TGY3 1603 aaPredicted RBP15.81■□□□□ 0.12
HPS4-212ENST00000481910 CNGB1Q14028 1251 aaPredicted RBP15.81■□□□□ 0.12
HPS4-212ENST00000481910 PHLPP1O60346 1717 aa15.81■□□□□ 0.12
HPS4-212ENST00000481910 NRKQ7Z2Y5 1582 aa15.81■□□□□ 0.12
HPS4-212ENST00000481910 FYB1O15117 783 aa15.8■□□□□ 0.12
HPS4-212ENST00000481910 NME9Q86XW9 330 aa15.8■□□□□ 0.12
HPS4-212ENST00000481910 LRRC59Q96AG4 307 aaKnown RBP15.8■□□□□ 0.12
HPS4-212ENST00000481910 SBNO1A3KN83 1393 aa15.8■□□□□ 0.12
HPS4-212ENST00000481910 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
HPS4-212ENST00000481910 SPATA31A3Q5VYP0 1347 aa15.79■□□□□ 0.12
HPS4-212ENST00000481910 NUTM2GQ5VZR2 741 aa15.79■□□□□ 0.12
HPS4-212ENST00000481910 GGNBP2Q9H3C7 697 aa15.79■□□□□ 0.12
HPS4-212ENST00000481910 NLRP6P59044 892 aa15.78■□□□□ 0.12
HPS4-212ENST00000481910 CC2D1BQ5T0F9 858 aaKnown RBP15.78■□□□□ 0.12
HPS4-212ENST00000481910 TNS3Q68CZ2 1445 aa15.78■□□□□ 0.12
HPS4-212ENST00000481910 FBXO41Q8TF61 875 aa15.77■□□□□ 0.12
HPS4-212ENST00000481910 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.12
HPS4-212ENST00000481910 HSPA1LP34931 641 aa15.76■□□□□ 0.11
HPS4-212ENST00000481910 NLRP13Q86W25 1043 aa15.76■□□□□ 0.11
HPS4-212ENST00000481910 COG3Q96JB2 828 aa15.76■□□□□ 0.11
HPS4-212ENST00000481910 KIF20BQ96Q89 1820 aa15.76■□□□□ 0.11
HPS4-212ENST00000481910 ARHGEF10O15013 1369 aa15.76■□□□□ 0.11
HPS4-212ENST00000481910 PLEKHG5O94827 1062 aa15.76■□□□□ 0.11
HPS4-212ENST00000481910 DIEXFQ68CQ4 756 aaKnown RBP15.76■□□□□ 0.11
HPS4-212ENST00000481910 COL16A1Q07092 1604 aaPredicted RBP15.76■□□□□ 0.11
HPS4-212ENST00000481910 ALS2Q96Q42 1657 aa15.76■□□□□ 0.11
HPS4-212ENST00000481910 PIK3C2AO00443 1686 aa15.75■□□□□ 0.11
HPS4-212ENST00000481910 NSD2O96028 1365 aa15.75■□□□□ 0.11
HPS4-212ENST00000481910 NPC1L1Q9UHC9 1359 aa15.74■□□□□ 0.11
HPS4-212ENST00000481910 MORC1Q86VD1 984 aa15.74■□□□□ 0.11
HPS4-212ENST00000481910 USP31Q70CQ4 1352 aa15.74■□□□□ 0.11
HPS4-212ENST00000481910 CABLES1Q8TDN4 633 aa15.72■□□□□ 0.11
HPS4-212ENST00000481910 SOX12O15370 315 aa15.71■□□□□ 0.11
HPS4-212ENST00000481910 TNNT2P45379 298 aaPredicted RBP15.71■□□□□ 0.11
HPS4-212ENST00000481910 OVOS2A0A0J9YW53 1432 aa15.71■□□□□ 0.11
HPS4-212ENST00000481910 OVOS2Q6IE36 1432 aa15.71■□□□□ 0.11
HPS4-212ENST00000481910 PNPLA6Q8IY17 1366 aa15.7■□□□□ 0.1
HPS4-212ENST00000481910 ANP32CO43423 234 aa15.7■□□□□ 0.1
HPS4-212ENST00000481910 ANKRD26Q9UPS8 1709 aa15.7■□□□□ 0.1
HPS4-212ENST00000481910 HAP1P54257 671 aaPredicted RBP15.7■□□□□ 0.1
HPS4-212ENST00000481910 JCADQ9P266 1359 aa15.69■□□□□ 0.1
HPS4-212ENST00000481910 GCP02774 474 aa15.69■□□□□ 0.1
HPS4-212ENST00000481910 KCNH5Q8NCM2 988 aa15.69■□□□□ 0.1
HPS4-212ENST00000481910 MARF1Q9Y4F3 1742 aaKnown RBP15.69■□□□□ 0.1
HPS4-212ENST00000481910 USP19O94966 1318 aa15.69■□□□□ 0.1
HPS4-212ENST00000481910 PRKRIP1Q9H875 184 aaPredicted RBP15.68■□□□□ 0.1
HPS4-212ENST00000481910 USP54Q70EL1 1684 aa15.68■□□□□ 0.1
HPS4-212ENST00000481910 MED1Q15648 1581 aaPredicted RBP15.68■□□□□ 0.1
HPS4-212ENST00000481910 FBLN1P23142 703 aa15.68■□□□□ 0.1
HPS4-212ENST00000481910 RALBP1Q15311 655 aa15.68■□□□□ 0.1
HPS4-212ENST00000481910 ANP32EQ9BTT0 268 aa15.67■□□□□ 0.1
HPS4-212ENST00000481910 PARD3Q8TEW0 1356 aa15.67■□□□□ 0.1
HPS4-212ENST00000481910 COL22A1Q8NFW1 1626 aaPredicted RBP15.66■□□□□ 0.1
HPS4-212ENST00000481910 SHPRHQ149N8 1683 aa15.65■□□□□ 0.1
HPS4-212ENST00000481910 NUTM2BA6NNL0 878 aaPredicted RBP15.65■□□□□ 0.1
HPS4-212ENST00000481910 NUTM2EB1AL46 878 aaPredicted RBP15.65■□□□□ 0.1
HPS4-212ENST00000481910 ZC3H6P61129 1189 aaKnown RBP15.65■□□□□ 0.1
HPS4-212ENST00000481910 NUTM2AQ8IVF1 878 aaPredicted RBP15.65■□□□□ 0.1
HPS4-212ENST00000481910 SLIT3O75094 1523 aa15.65■□□□□ 0.1
HPS4-212ENST00000481910 CRYBG1Q9Y4K1 1723 aa15.64■□□□□ 0.09
HPS4-212ENST00000481910 MAP2P11137 1827 aaKnown RBP15.64■□□□□ 0.09
HPS4-212ENST00000481910 RRS1Q15050 365 aaKnown RBP15.64■□□□□ 0.09
HPS4-212ENST00000481910 PHRF1Q9P1Y6 1649 aaKnown RBP15.64■□□□□ 0.09
HPS4-212ENST00000481910 ZBTB7CA1YPR0 619 aa15.63■□□□□ 0.09
HPS4-212ENST00000481910 AATKQ6ZMQ8 1374 aa15.63■□□□□ 0.09
HPS4-212ENST00000481910 SPATA31A6Q5VVP1 1343 aa15.63■□□□□ 0.09
HPS4-212ENST00000481910 PPM1GO15355 546 aaPredicted RBP15.62■□□□□ 0.09
HPS4-212ENST00000481910 PPP2R1AP30153 589 aa15.62■□□□□ 0.09
HPS4-212ENST00000481910 POLKQ9UBT6 870 aa15.62■□□□□ 0.09
HPS4-212ENST00000481910 ABCA3Q99758 1704 aa15.62■□□□□ 0.09
HPS4-212ENST00000481910 NFAT5O94916 1531 aa15.62■□□□□ 0.09
HPS4-212ENST00000481910 MYBBP1AQ9BQG0 1328 aaKnown RBP15.61■□□□□ 0.09
HPS4-212ENST00000481910 ADAMTS2O95450 1211 aa15.61■□□□□ 0.09
HPS4-212ENST00000481910 MTHFSP49914 203 aa15.61■□□□□ 0.09
HPS4-212ENST00000481910 ARHGEF25Q86VW2 580 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms