RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 ANKRD36BQ8N2N9 1353 aa17.92■□□□□ 0.46
CCDC78-211ENST00000481804 NUCB1Q02818 461 aa17.91■□□□□ 0.46
CCDC78-211ENST00000481804 ASXL2Q76L83 1435 aa17.91■□□□□ 0.46
CCDC78-211ENST00000481804 GOLGA6L22H0YM25 854 aa17.91■□□□□ 0.46
CCDC78-211ENST00000481804 ISY1Q9ULR0 285 aaKnown RBP17.91■□□□□ 0.46
CCDC78-211ENST00000481804 NSD2O96028 1365 aa17.9■□□□□ 0.46
CCDC78-211ENST00000481804 RBM25P49756 843 aaKnown RBP17.9■□□□□ 0.46
CCDC78-211ENST00000481804 HSP90AA2PQ14568 343 aaPredicted RBP17.9■□□□□ 0.46
CCDC78-211ENST00000481804 C1orf115Q9H7X2 142 aa17.9■□□□□ 0.46
CCDC78-211ENST00000481804 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
CCDC78-211ENST00000481804 ANP32BQ92688 251 aaKnown RBP17.9■□□□□ 0.46
CCDC78-211ENST00000481804 SKOR2Q2VWA4 1001 aaPredicted RBP17.89■□□□□ 0.46
CCDC78-211ENST00000481804 SNX21Q969T3 373 aa17.89■□□□□ 0.46
CCDC78-211ENST00000481804 ZNF692Q9BU19 519 aaPredicted RBP17.89■□□□□ 0.46
CCDC78-211ENST00000481804 CIZ1Q9ULV3 898 aaPredicted RBP17.89■□□□□ 0.46
CCDC78-211ENST00000481804 ABCC11Q96J66 1382 aa17.89■□□□□ 0.45
CCDC78-211ENST00000481804 DIAPH1O60610 1272 aaKnown RBP17.88■□□□□ 0.45
CCDC78-211ENST00000481804 QRICH2Q9H0J4 1663 aa17.88■□□□□ 0.45
CCDC78-211ENST00000481804 VWDEQ8N2E2 1590 aa17.87■□□□□ 0.45
CCDC78-211ENST00000481804 PLEKHF1Q96S99 279 aa17.87■□□□□ 0.45
CCDC78-211ENST00000481804 EFCAB6Q5THR3 1501 aa17.87■□□□□ 0.45
CCDC78-211ENST00000481804 PTMSP20962 102 aa17.87■□□□□ 0.45
CCDC78-211ENST00000481804 BMP2KLQ5H9B9 411 aa17.87■□□□□ 0.45
CCDC78-211ENST00000481804 MYO3AQ8NEV4 1616 aa17.86■□□□□ 0.45
CCDC78-211ENST00000481804 ELL2O00472 640 aaPredicted RBP17.86■□□□□ 0.45
CCDC78-211ENST00000481804 VGFO15240 615 aaPredicted RBP17.86■□□□□ 0.45
CCDC78-211ENST00000481804 MROH2AA6NES4 1674 aa17.86■□□□□ 0.45
CCDC78-211ENST00000481804 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
CCDC78-211ENST00000481804 NEURL4Q96JN8 1562 aa17.86■□□□□ 0.45
CCDC78-211ENST00000481804 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
CCDC78-211ENST00000481804 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
CCDC78-211ENST00000481804 NRXN1Q9ULB1 1477 aa17.86■□□□□ 0.45
CCDC78-211ENST00000481804 K7ELQ4 463 aaPredicted RBP17.85■□□□□ 0.45
CCDC78-211ENST00000481804 RAB3GAP1Q15042 981 aa17.85■□□□□ 0.45
CCDC78-211ENST00000481804 IL16Q14005 1332 aa17.85■□□□□ 0.45
CCDC78-211ENST00000481804 NCLP19338 710 aaKnown RBP17.85■□□□□ 0.45
CCDC78-211ENST00000481804 GAS2L3Q86XJ1 694 aa17.85■□□□□ 0.45
CCDC78-211ENST00000481804 CHMP4BQ9H444 224 aaKnown RBP17.85■□□□□ 0.45
CCDC78-211ENST00000481804 MINK1Q8N4C8 1332 aaPredicted RBP17.85■□□□□ 0.45
CCDC78-211ENST00000481804 RBM42Q9BTD8 480 aaKnown RBP17.85■□□□□ 0.45
CCDC78-211ENST00000481804 RAPGEF3O95398 923 aa17.84■□□□□ 0.45
CCDC78-211ENST00000481804 DDX49Q9Y6V7 483 aaKnown RBP17.84■□□□□ 0.45
CCDC78-211ENST00000481804 SETBP1Q9Y6X0 1596 aa17.84■□□□□ 0.45
CCDC78-211ENST00000481804 A0A1W2PP64 1363 aa17.84■□□□□ 0.45
CCDC78-211ENST00000481804 RPGRIP1LQ68CZ1 1315 aa17.84■□□□□ 0.45
CCDC78-211ENST00000481804 OSCARQ8IYS5 282 aa17.83■□□□□ 0.45
CCDC78-211ENST00000481804 INO80Q9ULG1 1556 aaPredicted RBP17.83■□□□□ 0.45
CCDC78-211ENST00000481804 ALDH1L2Q3SY69 923 aa17.83■□□□□ 0.44
CCDC78-211ENST00000481804 TBC1D9Q6ZT07 1266 aa17.83■□□□□ 0.44
CCDC78-211ENST00000481804 GCC1Q96CN9 775 aa17.83■□□□□ 0.44
CCDC78-211ENST00000481804 ERBB4Q15303 1308 aa17.83■□□□□ 0.44
CCDC78-211ENST00000481804 SSFA2P28290 1259 aa17.83■□□□□ 0.44
CCDC78-211ENST00000481804 CD2BP2O95400 341 aaKnown RBP17.82■□□□□ 0.44
CCDC78-211ENST00000481804 PRKAR2BP31323 418 aa17.82■□□□□ 0.44
CCDC78-211ENST00000481804 ARAP3Q8WWN8 1544 aa17.82■□□□□ 0.44
CCDC78-211ENST00000481804 DDIT3P35638 169 aa17.81■□□□□ 0.44
CCDC78-211ENST00000481804 PPRC1Q5VV67 1664 aaKnown RBP17.81■□□□□ 0.44
CCDC78-211ENST00000481804 FYB1O15117 783 aa17.81■□□□□ 0.44
CCDC78-211ENST00000481804 NASPP49321 788 aaPredicted RBP17.81■□□□□ 0.44
CCDC78-211ENST00000481804 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
CCDC78-211ENST00000481804 THUMPD2Q9BTF0 503 aaKnown RBP17.81■□□□□ 0.44
CCDC78-211ENST00000481804 ADGRB3O60242 1522 aa17.81■□□□□ 0.44
CCDC78-211ENST00000481804 NCOA3Q9Y6Q9 1424 aa17.81■□□□□ 0.44
CCDC78-211ENST00000481804 HDGFL2Q7Z4V5 671 aaPredicted RBP17.81■□□□□ 0.44
CCDC78-211ENST00000481804 VSIG10Q8N0Z9 540 aa17.81■□□□□ 0.44
CCDC78-211ENST00000481804 NPATQ14207 1427 aa17.8■□□□□ 0.44
CCDC78-211ENST00000481804 MROH1Q8NDA8 1641 aa17.8■□□□□ 0.44
CCDC78-211ENST00000481804 IFT172Q9UG01 1749 aa17.8■□□□□ 0.44
CCDC78-211ENST00000481804 HMOX1P09601 288 aa17.79■□□□□ 0.44
CCDC78-211ENST00000481804 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
CCDC78-211ENST00000481804 RRP9O43818 475 aaKnown RBP17.79■□□□□ 0.44
CCDC78-211ENST00000481804 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.79■□□□□ 0.44
CCDC78-211ENST00000481804 GAS2L2Q8NHY3 880 aa17.79■□□□□ 0.44
CCDC78-211ENST00000481804 ADGRB1O14514 1584 aa17.79■□□□□ 0.44
CCDC78-211ENST00000481804 CDC45O75419 566 aa17.79■□□□□ 0.44
CCDC78-211ENST00000481804 KIF2CQ99661 725 aa17.78■□□□□ 0.44
CCDC78-211ENST00000481804 USP32Q8NFA0 1604 aa17.78■□□□□ 0.44
CCDC78-211ENST00000481804 ZBTB7BO15156 539 aaPredicted RBP17.77■□□□□ 0.44
CCDC78-211ENST00000481804 ABCA9Q8IUA7 1624 aa17.77■□□□□ 0.44
CCDC78-211ENST00000481804 MSNP26038 577 aaKnown RBP17.77■□□□□ 0.44
CCDC78-211ENST00000481804 FCHSD2O94868 740 aa17.77■□□□□ 0.43
CCDC78-211ENST00000481804 CCDC173Q0VFZ6 552 aa17.77■□□□□ 0.43
CCDC78-211ENST00000481804 TULP4Q9NRJ4 1543 aa17.77■□□□□ 0.43
CCDC78-211ENST00000481804 MCTP1Q6DN14 999 aa17.76■□□□□ 0.43
CCDC78-211ENST00000481804 FBLN1P23142 703 aa17.76■□□□□ 0.43
CCDC78-211ENST00000481804 PRAM1Q96QH2 718 aa17.76■□□□□ 0.43
CCDC78-211ENST00000481804 CALD1Q05682 793 aaKnown RBP17.76■□□□□ 0.43
CCDC78-211ENST00000481804 PPIP5K1Q6PFW1 1433 aa17.75■□□□□ 0.43
CCDC78-211ENST00000481804 ZNF428Q96B54 188 aa17.75■□□□□ 0.43
CCDC78-211ENST00000481804 APBB1O00213 710 aa17.75■□□□□ 0.43
CCDC78-211ENST00000481804 BAG4O95429 457 aaKnown RBP17.75■□□□□ 0.43
CCDC78-211ENST00000481804 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
CCDC78-211ENST00000481804 GLI2P10070 1586 aa17.74■□□□□ 0.43
CCDC78-211ENST00000481804 ATAD2Q6PL18 1390 aa17.74■□□□□ 0.43
CCDC78-211ENST00000481804 ZC3H13Q5T200 1668 aaKnown RBP17.74■□□□□ 0.43
CCDC78-211ENST00000481804 VAMP4O75379 141 aa17.73■□□□□ 0.43
CCDC78-211ENST00000481804 CAVIN1Q6NZI2 390 aaKnown RBP17.73■□□□□ 0.43
CCDC78-211ENST00000481804 MRPL50Q8N5N7 158 aaKnown RBP17.73■□□□□ 0.43
CCDC78-211ENST00000481804 GNAI1P63096 354 aa17.73■□□□□ 0.43
CCDC78-211ENST00000481804 KLHL40Q2TBA0 621 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms