RNA–Protein interactions for RNA: ENST00000481573.1

SEC61B-202, Transcript of Sec61 translocon beta subunit, humanhuman

TSL 2

Gene SEC61B, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-202ENST00000481573 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
SEC61B-202ENST00000481573 SSH2Q76I76 1423 aa18.28■□□□□ 0.52
SEC61B-202ENST00000481573 USP54Q70EL1 1684 aa18.28■□□□□ 0.52
SEC61B-202ENST00000481573 CRYBG1Q9Y4K1 1723 aa18.26■□□□□ 0.51
SEC61B-202ENST00000481573 FOXO3O43524 673 aa18.26■□□□□ 0.51
SEC61B-202ENST00000481573 CARD14Q9BXL6 1004 aa18.26■□□□□ 0.51
SEC61B-202ENST00000481573 KTN1Q86UP2 1357 aaKnown RBP18.26■□□□□ 0.51
SEC61B-202ENST00000481573 NGDNQ8NEJ9 315 aaKnown RBP18.25■□□□□ 0.51
SEC61B-202ENST00000481573 PANK3Q9H999 370 aa18.25■□□□□ 0.51
SEC61B-202ENST00000481573 NSD3Q9BZ95 1437 aa18.24■□□□□ 0.51
SEC61B-202ENST00000481573 XPCQ01831 940 aaPredicted RBP18.24■□□□□ 0.51
SEC61B-202ENST00000481573 TERF2IPQ9NYB0 399 aa18.24■□□□□ 0.51
SEC61B-202ENST00000481573 EDC4Q6P2E9 1401 aaKnown RBP18.23■□□□□ 0.51
SEC61B-202ENST00000481573 ABCA3Q99758 1704 aa18.23■□□□□ 0.51
SEC61B-202ENST00000481573 DDX10Q13206 875 aaKnown RBP18.23■□□□□ 0.51
SEC61B-202ENST00000481573 HDGFL2Q7Z4V5 671 aaPredicted RBP18.23■□□□□ 0.51
SEC61B-202ENST00000481573 RGS17Q9UGC6 210 aaPredicted RBP18.23■□□□□ 0.51
SEC61B-202ENST00000481573 NPHP3Q7Z494 1330 aa18.23■□□□□ 0.51
SEC61B-202ENST00000481573 SOS2Q07890 1332 aaPredicted RBP18.22■□□□□ 0.51
SEC61B-202ENST00000481573 ZNF692Q9BU19 519 aaPredicted RBP18.21■□□□□ 0.51
SEC61B-202ENST00000481573 PER1O15534 1290 aaPredicted RBP18.2■□□□□ 0.5
SEC61B-202ENST00000481573 PSME1Q06323 249 aa18.2■□□□□ 0.5
SEC61B-202ENST00000481573 KRT28Q7Z3Y7 464 aa18.2■□□□□ 0.5
SEC61B-202ENST00000481573 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
SEC61B-202ENST00000481573 PHRF1Q9P1Y6 1649 aaKnown RBP18.2■□□□□ 0.5
SEC61B-202ENST00000481573 SBNO1A3KN83 1393 aa18.19■□□□□ 0.5
SEC61B-202ENST00000481573 BRD4O60885 1362 aaPredicted RBP18.19■□□□□ 0.5
SEC61B-202ENST00000481573 SHPRHQ149N8 1683 aa18.19■□□□□ 0.5
SEC61B-202ENST00000481573 TNS3Q68CZ2 1445 aa18.19■□□□□ 0.5
SEC61B-202ENST00000481573 TTC21BQ7Z4L5 1316 aa18.19■□□□□ 0.5
SEC61B-202ENST00000481573 SPATA31A3Q5VYP0 1347 aa18.16■□□□□ 0.5
SEC61B-202ENST00000481573 MAP2P11137 1827 aaKnown RBP18.15■□□□□ 0.5
SEC61B-202ENST00000481573 NME9Q86XW9 330 aa18.15■□□□□ 0.5
SEC61B-202ENST00000481573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.5
SEC61B-202ENST00000481573 TTC21AQ8NDW8 1320 aa18.15■□□□□ 0.5
SEC61B-202ENST00000481573 AMER1Q5JTC6 1135 aaPredicted RBP18.14■□□□□ 0.49
SEC61B-202ENST00000481573 LTN1O94822 1766 aa18.14■□□□□ 0.49
SEC61B-202ENST00000481573 OVOS2A0A0J9YW53 1432 aa18.14■□□□□ 0.49
SEC61B-202ENST00000481573 OVOS2Q6IE36 1432 aa18.14■□□□□ 0.49
SEC61B-202ENST00000481573 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
SEC61B-202ENST00000481573 ZRANB1Q9UGI0 708 aa18.13■□□□□ 0.49
SEC61B-202ENST00000481573 SRCAPQ6ZRS2 3230 aa18.13■□□□□ 0.49
SEC61B-202ENST00000481573 SLIT3O75094 1523 aa18.13■□□□□ 0.49
SEC61B-202ENST00000481573 FYB1O15117 783 aa18.12■□□□□ 0.49
SEC61B-202ENST00000481573 KNSTRNQ9Y448 316 aa18.12■□□□□ 0.49
SEC61B-202ENST00000481573 USP31Q70CQ4 1352 aa18.12■□□□□ 0.49
SEC61B-202ENST00000481573 CGNL1Q0VF96 1302 aa18.11■□□□□ 0.49
SEC61B-202ENST00000481573 PNPLA6Q8IY17 1366 aa18.11■□□□□ 0.49
SEC61B-202ENST00000481573 NPC1L1Q9UHC9 1359 aa18.11■□□□□ 0.49
SEC61B-202ENST00000481573 ARHGEF10O15013 1369 aa18.1■□□□□ 0.49
SEC61B-202ENST00000481573 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
SEC61B-202ENST00000481573 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
SEC61B-202ENST00000481573 NFAT5O94916 1531 aa18.09■□□□□ 0.49
SEC61B-202ENST00000481573 NSD2O96028 1365 aa18.09■□□□□ 0.49
SEC61B-202ENST00000481573 ABTB2Q8N961 1025 aa18.09■□□□□ 0.49
SEC61B-202ENST00000481573 LRRC59Q96AG4 307 aaKnown RBP18.08■□□□□ 0.48
SEC61B-202ENST00000481573 RGPD5Q99666 1765 aa18.08■□□□□ 0.48
SEC61B-202ENST00000481573 USP19O94966 1318 aa18.07■□□□□ 0.48
SEC61B-202ENST00000481573 POTEAQ6S8J7 498 aa18.07■□□□□ 0.48
SEC61B-202ENST00000481573 NLRP6P59044 892 aa18.06■□□□□ 0.48
SEC61B-202ENST00000481573 CC2D1BQ5T0F9 858 aaKnown RBP18.06■□□□□ 0.48
SEC61B-202ENST00000481573 LMOD2Q6P5Q4 547 aa18.06■□□□□ 0.48
SEC61B-202ENST00000481573 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
SEC61B-202ENST00000481573 COL18A1P39060 1754 aa18.05■□□□□ 0.48
SEC61B-202ENST00000481573 PARD3Q8TEW0 1356 aa18.04■□□□□ 0.48
SEC61B-202ENST00000481573 JCADQ9P266 1359 aa18.04■□□□□ 0.48
SEC61B-202ENST00000481573 CNGB1Q14028 1251 aaPredicted RBP18.03■□□□□ 0.48
SEC61B-202ENST00000481573 NLRP13Q86W25 1043 aa18.03■□□□□ 0.48
SEC61B-202ENST00000481573 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
SEC61B-202ENST00000481573 PLEKHG5O94827 1062 aa18.02■□□□□ 0.48
SEC61B-202ENST00000481573 COG3Q96JB2 828 aa18.02■□□□□ 0.48
SEC61B-202ENST00000481573 PLCH1Q4KWH8 1693 aa18.01■□□□□ 0.47
SEC61B-202ENST00000481573 LRP6O75581 1613 aa18.01■□□□□ 0.47
SEC61B-202ENST00000481573 LMO7Q8WWI1 1683 aa18■□□□□ 0.47
SEC61B-202ENST00000481573 FBLN1P23142 703 aa18■□□□□ 0.47
SEC61B-202ENST00000481573 MORC1Q86VD1 984 aa17.99■□□□□ 0.47
SEC61B-202ENST00000481573 DIEXFQ68CQ4 756 aaKnown RBP17.98■□□□□ 0.47
SEC61B-202ENST00000481573 COL14A1Q05707 1796 aaKnown RBP17.98■□□□□ 0.47
SEC61B-202ENST00000481573 RGPD2P0DJD1 1756 aa17.97■□□□□ 0.47
SEC61B-202ENST00000481573 AATKQ6ZMQ8 1374 aa17.97■□□□□ 0.47
SEC61B-202ENST00000481573 SOX12O15370 315 aa17.97■□□□□ 0.47
SEC61B-202ENST00000481573 GCP02774 474 aa17.97■□□□□ 0.47
SEC61B-202ENST00000481573 TNNT2P45379 298 aaPredicted RBP17.97■□□□□ 0.47
SEC61B-202ENST00000481573 PRKRIP1Q9H875 184 aaPredicted RBP17.97■□□□□ 0.47
SEC61B-202ENST00000481573 SMG6Q86US8 1419 aaKnown RBP17.97■□□□□ 0.47
SEC61B-202ENST00000481573 NRAPQ86VF7 1730 aa17.96■□□□□ 0.47
SEC61B-202ENST00000481573 KCNH5Q8NCM2 988 aa17.95■□□□□ 0.46
SEC61B-202ENST00000481573 SPATA31A6Q5VVP1 1343 aa17.95■□□□□ 0.46
SEC61B-202ENST00000481573 NWD2Q9ULI1 1742 aa17.95■□□□□ 0.46
SEC61B-202ENST00000481573 CPDO75976 1380 aa17.94■□□□□ 0.46
SEC61B-202ENST00000481573 ABCC6O95255 1503 aa17.94■□□□□ 0.46
SEC61B-202ENST00000481573 RRS1Q15050 365 aaKnown RBP17.94■□□□□ 0.46
SEC61B-202ENST00000481573 MAP3K19Q56UN5 1328 aa17.94■□□□□ 0.46
SEC61B-202ENST00000481573 KIAA0232Q92628 1395 aa17.93■□□□□ 0.46
SEC61B-202ENST00000481573 RALBP1Q15311 655 aa17.93■□□□□ 0.46
SEC61B-202ENST00000481573 PPP2R1AP30153 589 aa17.92■□□□□ 0.46
SEC61B-202ENST00000481573 ZC3H6P61129 1189 aaKnown RBP17.92■□□□□ 0.46
SEC61B-202ENST00000481573 ARHGEF25Q86VW2 580 aa17.92■□□□□ 0.46
SEC61B-202ENST00000481573 POLKQ9UBT6 870 aa17.92■□□□□ 0.46
SEC61B-202ENST00000481573 EMILIN1Q9Y6C2 1016 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms