RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ADAMTS2O95450 1211 aa15.05■□□□□ -0
SSBP1-210ENST00000481508 CDK19Q9BWU1 502 aa15.05■□□□□ -0
SSBP1-210ENST00000481508 TRPM3Q9HCF6 1732 aaPredicted RBP15.04■□□□□ -0
SSBP1-210ENST00000481508 EIF3AQ14152 1382 aaKnown RBP15.04■□□□□ -0
SSBP1-210ENST00000481508 XPCQ01831 940 aaPredicted RBP15.04■□□□□ -0
SSBP1-210ENST00000481508 ATRNO75882 1429 aa15.02■□□□□ -0
SSBP1-210ENST00000481508 SOS2Q07890 1332 aaPredicted RBP15.02■□□□□ -0
SSBP1-210ENST00000481508 FOXO3O43524 673 aa15.02■□□□□ -0
SSBP1-210ENST00000481508 PMFBP1Q8TBY8 1022 aa15.02■□□□□ -0
SSBP1-210ENST00000481508 USP47Q96K76 1375 aa15.01□□□□□ -0.01
SSBP1-210ENST00000481508 NUDT16Q96DE0 195 aaKnown RBP15.01□□□□□ -0.01
SSBP1-210ENST00000481508 NGLY1Q96IV0 654 aa15.01□□□□□ -0.01
SSBP1-210ENST00000481508 CABP2Q9NPB3 220 aa15.01□□□□□ -0.01
SSBP1-210ENST00000481508 PHF8Q9UPP1 1060 aa15.01□□□□□ -0.01
SSBP1-210ENST00000481508 COL22A1Q8NFW1 1626 aaPredicted RBP15.01□□□□□ -0.01
SSBP1-210ENST00000481508 TNKS1BP1Q9C0C2 1729 aaKnown RBP15□□□□□ -0.01
SSBP1-210ENST00000481508 SBNO2Q9Y2G9 1366 aa14.99□□□□□ -0.01
SSBP1-210ENST00000481508 GLI3P10071 1580 aa14.99□□□□□ -0.01
SSBP1-210ENST00000481508 ST20-MTHFSA0A0A6YYL1 179 aa14.99□□□□□ -0.01
SSBP1-210ENST00000481508 TESK2Q96S53 571 aa14.99□□□□□ -0.01
SSBP1-210ENST00000481508 ALS2Q96Q42 1657 aa14.99□□□□□ -0.01
SSBP1-210ENST00000481508 NPHP3Q7Z494 1330 aa14.98□□□□□ -0.01
SSBP1-210ENST00000481508 SRPK2P78362 688 aaKnown RBP14.98□□□□□ -0.01
SSBP1-210ENST00000481508 DEFB132Q7Z7B7 95 aa14.98□□□□□ -0.01
SSBP1-210ENST00000481508 USP21Q9UK80 565 aa14.98□□□□□ -0.01
SSBP1-210ENST00000481508 AKAP12Q02952 1782 aa14.98□□□□□ -0.01
SSBP1-210ENST00000481508 ABCA3Q99758 1704 aa14.97□□□□□ -0.01
SSBP1-210ENST00000481508 PPIP5K1Q6PFW1 1433 aa14.97□□□□□ -0.01
SSBP1-210ENST00000481508 EVC2Q86UK5 1308 aa14.96□□□□□ -0.01
SSBP1-210ENST00000481508 BCL9LQ86UU0 1499 aa14.96□□□□□ -0.01
SSBP1-210ENST00000481508 KRT28Q7Z3Y7 464 aa14.96□□□□□ -0.01
SSBP1-210ENST00000481508 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
SSBP1-210ENST00000481508 PSDA5PKW4 1024 aaPredicted RBP14.95□□□□□ -0.02
SSBP1-210ENST00000481508 LRRC59Q96AG4 307 aaKnown RBP14.95□□□□□ -0.02
SSBP1-210ENST00000481508 TRPC5Q9UL62 973 aaPredicted RBP14.95□□□□□ -0.02
SSBP1-210ENST00000481508 BLMP54132 1417 aaPredicted RBP14.94□□□□□ -0.02
SSBP1-210ENST00000481508 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
SSBP1-210ENST00000481508 POLR3AO14802 1390 aaPredicted RBP14.94□□□□□ -0.02
SSBP1-210ENST00000481508 SPATA31A3Q5VYP0 1347 aa14.93□□□□□ -0.02
SSBP1-210ENST00000481508 TNS3Q68CZ2 1445 aa14.93□□□□□ -0.02
SSBP1-210ENST00000481508 MON2Q7Z3U7 1717 aa14.93□□□□□ -0.02
SSBP1-210ENST00000481508 PLEKHG3A1L390 1219 aa14.93□□□□□ -0.02
SSBP1-210ENST00000481508 ACEP12821 1306 aa14.92□□□□□ -0.02
SSBP1-210ENST00000481508 SBNO1A3KN83 1393 aa14.92□□□□□ -0.02
SSBP1-210ENST00000481508 NRKQ7Z2Y5 1582 aa14.92□□□□□ -0.02
SSBP1-210ENST00000481508 MYOM1P52179 1685 aa14.92□□□□□ -0.02
SSBP1-210ENST00000481508 CD163L1Q9NR16 1453 aa14.91□□□□□ -0.02
SSBP1-210ENST00000481508 PSME1Q06323 249 aa14.91□□□□□ -0.02
SSBP1-210ENST00000481508 NGDNQ8NEJ9 315 aaKnown RBP14.91□□□□□ -0.02
SSBP1-210ENST00000481508 CABP1Q9NZU7 370 aa14.91□□□□□ -0.02
SSBP1-210ENST00000481508 CCDC125Q86Z20 511 aa14.9□□□□□ -0.02
SSBP1-210ENST00000481508 PLCH1Q4KWH8 1693 aa14.9□□□□□ -0.02
SSBP1-210ENST00000481508 PHRF1Q9P1Y6 1649 aaKnown RBP14.89□□□□□ -0.03
SSBP1-210ENST00000481508 HSPA5P11021 654 aaKnown RBP14.89□□□□□ -0.03
SSBP1-210ENST00000481508 PIK3C2AO00443 1686 aa14.89□□□□□ -0.03
SSBP1-210ENST00000481508 PLEKHG5O94827 1062 aa14.88□□□□□ -0.03
SSBP1-210ENST00000481508 FNBP4Q8N3X1 1017 aaPredicted RBP14.88□□□□□ -0.03
SSBP1-210ENST00000481508 USP6P35125 1406 aa14.88□□□□□ -0.03
SSBP1-210ENST00000481508 TNS1Q9HBL0 1735 aaKnown RBP14.87□□□□□ -0.03
SSBP1-210ENST00000481508 CPSF1Q10570 1443 aaKnown RBP14.87□□□□□ -0.03
SSBP1-210ENST00000481508 SSH2Q76I76 1423 aa14.87□□□□□ -0.03
SSBP1-210ENST00000481508 CABLES1Q8TDN4 633 aa14.87□□□□□ -0.03
SSBP1-210ENST00000481508 RGPD1P0DJD0 1748 aa14.86□□□□□ -0.03
SSBP1-210ENST00000481508 POLA2Q14181 598 aa14.86□□□□□ -0.03
SSBP1-210ENST00000481508 SLC12A5Q9H2X9 1139 aa14.86□□□□□ -0.03
SSBP1-210ENST00000481508 CAMTA1Q9Y6Y1 1673 aa14.86□□□□□ -0.03
SSBP1-210ENST00000481508 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
SSBP1-210ENST00000481508 EIF4G2P78344 907 aaKnown RBP eCLIP14.85□□□□□ -0.03
SSBP1-210ENST00000481508 LMOD2Q6P5Q4 547 aa14.85□□□□□ -0.03
SSBP1-210ENST00000481508 ARHGEF10O15013 1369 aa14.85□□□□□ -0.03
SSBP1-210ENST00000481508 NUTM2GQ5VZR2 741 aa14.84□□□□□ -0.03
SSBP1-210ENST00000481508 YY1P25490 414 aa14.83□□□□□ -0.04
SSBP1-210ENST00000481508 TMF1P82094 1093 aa14.83□□□□□ -0.04
SSBP1-210ENST00000481508 TMC1Q8TDI8 760 aa14.83□□□□□ -0.04
SSBP1-210ENST00000481508 PUS7Q96PZ0 661 aaKnown RBP14.83□□□□□ -0.04
SSBP1-210ENST00000481508 A0A1W2PP64 1363 aa14.83□□□□□ -0.04
SSBP1-210ENST00000481508 C11orf95C9JLR9 678 aaPredicted RBP14.82□□□□□ -0.04
SSBP1-210ENST00000481508 GJD4Q96KN9 370 aaPredicted RBP14.82□□□□□ -0.04
SSBP1-210ENST00000481508 USP54Q70EL1 1684 aa14.81□□□□□ -0.04
SSBP1-210ENST00000481508 KTN1Q86UP2 1357 aaKnown RBP14.81□□□□□ -0.04
SSBP1-210ENST00000481508 ZBTB22O15209 634 aa14.8□□□□□ -0.04
SSBP1-210ENST00000481508 TTC21BQ7Z4L5 1316 aa14.8□□□□□ -0.04
SSBP1-210ENST00000481508 SLIT3O75094 1523 aa14.79□□□□□ -0.04
SSBP1-210ENST00000481508 NRAPQ86VF7 1730 aa14.79□□□□□ -0.04
SSBP1-210ENST00000481508 NWD2Q9ULI1 1742 aa14.79□□□□□ -0.04
SSBP1-210ENST00000481508 KIF20BQ96Q89 1820 aa14.78□□□□□ -0.04
SSBP1-210ENST00000481508 SLIT2O94813 1529 aa14.78□□□□□ -0.04
SSBP1-210ENST00000481508 BRD4O60885 1362 aaPredicted RBP14.78□□□□□ -0.04
SSBP1-210ENST00000481508 NINLQ9Y2I6 1382 aa14.78□□□□□ -0.04
SSBP1-210ENST00000481508 USP19O94966 1318 aa14.78□□□□□ -0.04
SSBP1-210ENST00000481508 SF3B2Q13435 895 aaKnown RBP14.78□□□□□ -0.04
SSBP1-210ENST00000481508 ABTB2Q8N961 1025 aa14.78□□□□□ -0.04
SSBP1-210ENST00000481508 ATF5Q9Y2D1 282 aaPredicted RBP14.78□□□□□ -0.04
SSBP1-210ENST00000481508 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
SSBP1-210ENST00000481508 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
SSBP1-210ENST00000481508 COL14A1Q05707 1796 aaKnown RBP14.77□□□□□ -0.05
SSBP1-210ENST00000481508 EDC4Q6P2E9 1401 aaKnown RBP14.76□□□□□ -0.05
SSBP1-210ENST00000481508 ANKRD36BQ8N2N9 1353 aa14.76□□□□□ -0.05
SSBP1-210ENST00000481508 SLC24A1O60721 1099 aa14.76□□□□□ -0.05
SSBP1-210ENST00000481508 R3HDM1Q15032 1099 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms