RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 TSR2Q969E8 191 aaKnown RBP18.19■□□□□ 0.5
PHF3-204ENST00000481385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.19■□□□□ 0.51e-6■■□□□ 11.8
PHF3-204ENST00000481385 METP08581 1390 aa18.19■□□□□ 0.5
PHF3-204ENST00000481385 CLUAP1Q96AJ1 413 aa18.19■□□□□ 0.5
PHF3-204ENST00000481385 TRIM35Q9UPQ4 493 aa18.19■□□□□ 0.5
PHF3-204ENST00000481385 DLC1Q96QB1 1528 aa18.19■□□□□ 0.5
PHF3-204ENST00000481385 TMPOP42166 694 aaKnown RBP18.17■□□□□ 0.5
PHF3-204ENST00000481385 PNPLA6Q8IY17 1366 aa18.17■□□□□ 0.5
PHF3-204ENST00000481385 KIF20BQ96Q89 1820 aa18.16■□□□□ 0.5
PHF3-204ENST00000481385 KIF13AQ9H1H9 1805 aa18.16■□□□□ 0.5
PHF3-204ENST00000481385 ZMYM3Q14202 1370 aa18.16■□□□□ 0.5
PHF3-204ENST00000481385 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
PHF3-204ENST00000481385 MYH16Q9H6N6 1097 aa18.15■□□□□ 0.5
PHF3-204ENST00000481385 NCKAP5LQ9HCH0 1330 aa18.15■□□□□ 0.5
PHF3-204ENST00000481385 DIAPH1O60610 1272 aaKnown RBP18.14■□□□□ 0.49
PHF3-204ENST00000481385 FAM161AQ3B820 660 aa18.14■□□□□ 0.49
PHF3-204ENST00000481385 TXNDC2Q86VQ3 553 aa18.14■□□□□ 0.49
PHF3-204ENST00000481385 PCDHB15Q9Y5E8 787 aa18.13■□□□□ 0.49
PHF3-204ENST00000481385 ATP7BP35670 1465 aa18.13■□□□□ 0.49
PHF3-204ENST00000481385 POLKQ9UBT6 870 aa18.13■□□□□ 0.49
PHF3-204ENST00000481385 PPM1GO15355 546 aaPredicted RBP18.12■□□□□ 0.49
PHF3-204ENST00000481385 EXOSC9Q06265 439 aaKnown RBP18.12■□□□□ 0.49
PHF3-204ENST00000481385 MAPK8IP3Q9UPT6 1336 aa18.12■□□□□ 0.49
PHF3-204ENST00000481385 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
PHF3-204ENST00000481385 WASLO00401 505 aaPredicted RBP18.11■□□□□ 0.49
PHF3-204ENST00000481385 RIPK4P57078 832 aa18.11■□□□□ 0.49
PHF3-204ENST00000481385 PPIP5K1Q6PFW1 1433 aa18.1■□□□□ 0.49
PHF3-204ENST00000481385 LRRC7Q96NW7 1537 aa18.1■□□□□ 0.49
PHF3-204ENST00000481385 CPSF1Q10570 1443 aaKnown RBP18.1■□□□□ 0.49
PHF3-204ENST00000481385 NME9Q86XW9 330 aa18.09■□□□□ 0.49
PHF3-204ENST00000481385 EMILIN1Q9Y6C2 1016 aa18.09■□□□□ 0.49
PHF3-204ENST00000481385 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.48
PHF3-204ENST00000481385 RSPH6AQ9H0K4 717 aa18.08■□□□□ 0.48
PHF3-204ENST00000481385 ESF1Q9H501 851 aaKnown RBP18.08■□□□□ 0.48
PHF3-204ENST00000481385 LAS1LQ9Y4W2 734 aaKnown RBP18.08■□□□□ 0.48
PHF3-204ENST00000481385 SSH1Q8WYL5 1049 aa18.07■□□□□ 0.48
PHF3-204ENST00000481385 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.07■□□□□ 0.48
PHF3-204ENST00000481385 CPS1P31327 1500 aa18.06■□□□□ 0.48
PHF3-204ENST00000481385 PRKAR2BP31323 418 aa18.06■□□□□ 0.48
PHF3-204ENST00000481385 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
PHF3-204ENST00000481385 HMOX1P09601 288 aa18.06■□□□□ 0.48
PHF3-204ENST00000481385 NUDT16Q96DE0 195 aaKnown RBP18.06■□□□□ 0.48
PHF3-204ENST00000481385 PHACTR3Q96KR7 559 aa18.06■□□□□ 0.48
PHF3-204ENST00000481385 SMC4Q9NTJ3 1288 aa18.06■□□□□ 0.48
PHF3-204ENST00000481385 TNRQ92752 1358 aa18.06■□□□□ 0.48
PHF3-204ENST00000481385 FAM135BQ49AJ0 1406 aa18.06■□□□□ 0.48
PHF3-204ENST00000481385 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
PHF3-204ENST00000481385 MVPQ14764 893 aaKnown RBP18.05■□□□□ 0.48
PHF3-204ENST00000481385 EDC4Q6P2E9 1401 aaKnown RBP18.05■□□□□ 0.48
PHF3-204ENST00000481385 ZKSCAN2Q63HK3 967 aa18.05■□□□□ 0.48
PHF3-204ENST00000481385 FCHSD2O94868 740 aa18.04■□□□□ 0.48
PHF3-204ENST00000481385 TRIM27P14373 513 aa18.04■□□□□ 0.48
PHF3-204ENST00000481385 PRR36Q9H6K5 1346 aa18.04■□□□□ 0.48
PHF3-204ENST00000481385 TECPR2O15040 1411 aa18.03■□□□□ 0.48
PHF3-204ENST00000481385 IL16Q14005 1332 aa18.03■□□□□ 0.48
PHF3-204ENST00000481385 ROBO2Q9HCK4 1378 aa18.03■□□□□ 0.48
PHF3-204ENST00000481385 TMEM2Q9UHN6 1383 aa18.03■□□□□ 0.48
PHF3-204ENST00000481385 CT47B1P0C2W7 299 aaPredicted RBP18.03■□□□□ 0.48
PHF3-204ENST00000481385 DZIP1LQ8IYY4 767 aaKnown RBP18.03■□□□□ 0.48
PHF3-204ENST00000481385 KNDC1Q76NI1 1749 aa18.03■□□□□ 0.48
PHF3-204ENST00000481385 UBR1Q8IWV7 1749 aa18.03■□□□□ 0.48
PHF3-204ENST00000481385 SEC24BO95487 1268 aa18.02■□□□□ 0.48
PHF3-204ENST00000481385 FTSJ3Q8IY81 847 aaKnown RBP18.02■□□□□ 0.48
PHF3-204ENST00000481385 PMFBP1Q8TBY8 1022 aa18.02■□□□□ 0.48
PHF3-204ENST00000481385 THUMPD2Q9BTF0 503 aaKnown RBP18.02■□□□□ 0.48
PHF3-204ENST00000481385 IL13P35225 146 aa18.02■□□□□ 0.47
PHF3-204ENST00000481385 RRS1Q15050 365 aaKnown RBP18.02■□□□□ 0.47
PHF3-204ENST00000481385 DDRGK1Q96HY6 314 aa18.01■□□□□ 0.47
PHF3-204ENST00000481385 NOB1Q9ULX3 412 aaKnown RBP18.01■□□□□ 0.47
PHF3-204ENST00000481385 ADAMTS13Q76LX8 1427 aa18.01■□□□□ 0.47
PHF3-204ENST00000481385 CCDC61Q9Y6R9 512 aa18.01■□□□□ 0.47
PHF3-204ENST00000481385 USP19O94966 1318 aa18■□□□□ 0.47
PHF3-204ENST00000481385 DEKP35659 375 aaKnown RBP18■□□□□ 0.47
PHF3-204ENST00000481385 LTKP29376 864 aa18■□□□□ 0.47
PHF3-204ENST00000481385 PDZRN3Q9UPQ7 1066 aa18■□□□□ 0.47
PHF3-204ENST00000481385 MON2Q7Z3U7 1717 aa18■□□□□ 0.47
PHF3-204ENST00000481385 AAMPQ13685 434 aa17.99■□□□□ 0.47
PHF3-204ENST00000481385 CEBPAP49715 358 aaPredicted RBP17.99■□□□□ 0.47
PHF3-204ENST00000481385 ATF7IPQ6VMQ6 1270 aa17.99■□□□□ 0.47
PHF3-204ENST00000481385 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
PHF3-204ENST00000481385 VIRMAQ69YN4 1812 aaKnown RBP17.99■□□□□ 0.47
PHF3-204ENST00000481385 CDK12Q9NYV4 1490 aaPredicted RBP17.98■□□□□ 0.47
PHF3-204ENST00000481385 SIRT1Q96EB6 747 aa17.98■□□□□ 0.47
PHF3-204ENST00000481385 C3P01024 1663 aa17.97■□□□□ 0.47
PHF3-204ENST00000481385 NUTM2FA1L443 756 aa17.97■□□□□ 0.47
PHF3-204ENST00000481385 NFE2L2Q16236 605 aa17.97■□□□□ 0.47
PHF3-204ENST00000481385 ITPRIPQ8IWB1 547 aa17.97■□□□□ 0.47
PHF3-204ENST00000481385 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.97■□□□□ 0.47
PHF3-204ENST00000481385 AATKQ6ZMQ8 1374 aa17.97■□□□□ 0.47
PHF3-204ENST00000481385 TMEM57Q8N5G2 664 aa17.96■□□□□ 0.47
PHF3-204ENST00000481385 COG3Q96JB2 828 aa17.96■□□□□ 0.47
PHF3-204ENST00000481385 AKAP12Q02952 1782 aa17.96■□□□□ 0.47
PHF3-204ENST00000481385 RWDD1Q9H446 243 aaPredicted RBP17.96■□□□□ 0.47
PHF3-204ENST00000481385 HDGFP51858 240 aaKnown RBP17.95■□□□□ 0.46
PHF3-204ENST00000481385 TSPYL6Q8N831 410 aa17.94■□□□□ 0.46
PHF3-204ENST00000481385 ITSN1Q15811 1721 aa17.93■□□□□ 0.46
PHF3-204ENST00000481385 NEFMP07197 916 aa17.93■□□□□ 0.46
PHF3-204ENST00000481385 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
PHF3-204ENST00000481385 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
PHF3-204ENST00000481385 PTPRUQ92729 1446 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms