RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-223ENST00000481173 SPDYE5A6NIY4 337 aa8.87□□□□□ -0.99
CCNL1-223ENST00000481173 VARSP26640 1264 aaKnown RBP8.87□□□□□ -0.99
CCNL1-223ENST00000481173 ZC3H15Q8WU90 426 aaKnown RBP8.87□□□□□ -0.99
CCNL1-223ENST00000481173 PLEKHG3A1L390 1219 aa8.86□□□□□ -0.99
CCNL1-223ENST00000481173 DESI1Q6ICB0 168 aa8.86□□□□□ -0.99
CCNL1-223ENST00000481173 RSBN1LQ6PCB5 846 aaPredicted RBP8.86□□□□□ -0.99
CCNL1-223ENST00000481173 CFAP99D6REC4 459 aa8.85□□□□□ -0.99
CCNL1-223ENST00000481173 WDR4P57081 412 aaKnown RBP8.85□□□□□ -0.99
CCNL1-223ENST00000481173 LYPD8Q6UX82 237 aa8.85□□□□□ -0.99
CCNL1-223ENST00000481173 TIMP2P16035 220 aa8.84□□□□□ -0.99
CCNL1-223ENST00000481173 PARP9Q8IXQ6 854 aa8.84□□□□□ -0.99
CCNL1-223ENST00000481173 FOXJ1Q92949 421 aa8.84□□□□□ -0.99
CCNL1-223ENST00000481173 PURBQ96QR8 312 aaKnown RBP8.84□□□□□ -0.99
CCNL1-223ENST00000481173 MAP10Q9P2G4 905 aa8.84□□□□□ -0.99
CCNL1-223ENST00000481173 ERBB4Q15303 1308 aa8.83□□□□□ -1
CCNL1-223ENST00000481173 SOBPA7XYQ1 873 aa8.83□□□□□ -1
CCNL1-223ENST00000481173 H3BM21 787 aa8.83□□□□□ -1
CCNL1-223ENST00000481173 ARID5BQ14865 1188 aa8.83□□□□□ -1
CCNL1-223ENST00000481173 CSPP1Q1MSJ5 1256 aa8.83□□□□□ -1
CCNL1-223ENST00000481173 MRPL14Q6P1L8 145 aaKnown RBP8.83□□□□□ -1
CCNL1-223ENST00000481173 CABLES1Q8TDN4 633 aa8.83□□□□□ -1
CCNL1-223ENST00000481173 IRF7Q92985 503 aa8.83□□□□□ -1
CCNL1-223ENST00000481173 ADH1CP00326 375 aa8.82□□□□□ -1
CCNL1-223ENST00000481173 HRCP23327 699 aa8.82□□□□□ -1
CCNL1-223ENST00000481173 MPNDQ8N594 471 aa8.82□□□□□ -1
CCNL1-223ENST00000481173 FAM174AQ8TBP5 190 aa8.82□□□□□ -1
CCNL1-223ENST00000481173 SPTLC1O15269 473 aa8.81□□□□□ -1
CCNL1-223ENST00000481173 SCARF1Q14162 830 aa8.81□□□□□ -1
CCNL1-223ENST00000481173 NPAS3Q8IXF0 933 aa8.81□□□□□ -1
CCNL1-223ENST00000481173 F12P00748 615 aaPredicted RBP8.8□□□□□ -1
CCNL1-223ENST00000481173 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
CCNL1-223ENST00000481173 GJA5P36382 358 aa8.8□□□□□ -1
CCNL1-223ENST00000481173 ZSCAN1Q8NBB4 408 aa8.8□□□□□ -1
CCNL1-223ENST00000481173 KLF16Q9BXK1 252 aaPredicted RBP8.8□□□□□ -1
CCNL1-223ENST00000481173 ZBTB3Q9H5J0 574 aa8.8□□□□□ -1
CCNL1-223ENST00000481173 TRIM66O15016 1216 aa8.79□□□□□ -1
CCNL1-223ENST00000481173 PER1O15534 1290 aaPredicted RBP8.79□□□□□ -1
CCNL1-223ENST00000481173 AGERQ15109 404 aa8.79□□□□□ -1
CCNL1-223ENST00000481173 DIXDC1Q155Q3 683 aa8.79□□□□□ -1
CCNL1-223ENST00000481173 RIC3Q7Z5B4 369 aa8.79□□□□□ -1
CCNL1-223ENST00000481173 ZFAND3Q9H8U3 227 aa8.79□□□□□ -1
CCNL1-223ENST00000481173 C4orf48Q5BLP8 95 aa8.78□□□□□ -1
CCNL1-223ENST00000481173 TSC1Q92574 1164 aa8.78□□□□□ -1
CCNL1-223ENST00000481173 FAM181BA6NEQ2 426 aa8.77□□□□□ -1.01
CCNL1-223ENST00000481173 ZIC2O95409 532 aaPredicted RBP8.77□□□□□ -1.01
CCNL1-223ENST00000481173 NR3C2P08235 984 aa8.77□□□□□ -1.01
CCNL1-223ENST00000481173 C6orf118Q5T5N4 469 aa8.77□□□□□ -1.01
CCNL1-223ENST00000481173 ITPKCQ96DU7 683 aa8.77□□□□□ -1.01
CCNL1-223ENST00000481173 CDK15Q96Q40 435 aa8.77□□□□□ -1.01
CCNL1-223ENST00000481173 QPCTQ16769 361 aa8.75□□□□□ -1.01
CCNL1-223ENST00000481173 PRPF38BQ5VTL8 546 aaKnown RBP8.75□□□□□ -1.01
CCNL1-223ENST00000481173 LIMD1Q9UGP4 676 aa8.75□□□□□ -1.01
CCNL1-223ENST00000481173 GRM5P41594 1212 aa8.74□□□□□ -1.01
CCNL1-223ENST00000481173 NUTM2BA6NNL0 878 aaPredicted RBP8.73□□□□□ -1.01
CCNL1-223ENST00000481173 NUTM2EB1AL46 878 aaPredicted RBP8.73□□□□□ -1.01
CCNL1-223ENST00000481173 NR5A1Q13285 461 aa8.73□□□□□ -1.01
CCNL1-223ENST00000481173 NUTM2DQ5VT03 806 aaPredicted RBP8.73□□□□□ -1.01
CCNL1-223ENST00000481173 BPHLQ86WA6 291 aaPredicted RBP8.73□□□□□ -1.01
CCNL1-223ENST00000481173 NUTM2AQ8IVF1 878 aaPredicted RBP8.73□□□□□ -1.01
CCNL1-223ENST00000481173 AK7Q96M32 723 aa8.73□□□□□ -1.01
CCNL1-223ENST00000481173 MAN1A2O60476 641 aa8.72□□□□□ -1.01
CCNL1-223ENST00000481173 MYSM1Q5VVJ2 828 aa8.72□□□□□ -1.01
CCNL1-223ENST00000481173 BMP2P12643 396 aa8.71□□□□□ -1.02
CCNL1-223ENST00000481173 FSHRP23945 695 aa8.7□□□□□ -1.02
CCNL1-223ENST00000481173 PDE4DQ08499 809 aa8.69□□□□□ -1.02
CCNL1-223ENST00000481173 LINC00528Q8N1L1 170 aa8.69□□□□□ -1.02
CCNL1-223ENST00000481173 MAGEB6P1A0A0J9YX57 407 aa8.68□□□□□ -1.02
CCNL1-223ENST00000481173 LILRB3O75022 631 aa8.68□□□□□ -1.02
CCNL1-223ENST00000481173 VSIG8P0DPA2 414 aa8.68□□□□□ -1.02
CCNL1-223ENST00000481173 RTL5Q5HYW3 569 aaPredicted RBP8.68□□□□□ -1.02
CCNL1-223ENST00000481173 MEIOBQ8N635 442 aa8.68□□□□□ -1.02
CCNL1-223ENST00000481173 C1QTNF2Q9BXJ5 285 aa8.68□□□□□ -1.02
CCNL1-223ENST00000481173 PPFIA3O75145 1194 aa8.67□□□□□ -1.02
CCNL1-223ENST00000481173 UPP2O95045 317 aa8.67□□□□□ -1.02
CCNL1-223ENST00000481173 VASH1Q7L8A9 365 aaPredicted RBP8.67□□□□□ -1.02
CCNL1-223ENST00000481173 SH3RF1Q7Z6J0 888 aa8.67□□□□□ -1.02
CCNL1-223ENST00000481173 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
CCNL1-223ENST00000481173 NBPF14Q5TI25 921 aa8.66□□□□□ -1.02
CCNL1-223ENST00000481173 SH3BP5LQ7L8J4 393 aa8.66□□□□□ -1.02
CCNL1-223ENST00000481173 HELBQ8NG08 1087 aaPredicted RBP8.66□□□□□ -1.02
CCNL1-223ENST00000481173 CARD14Q9BXL6 1004 aa8.66□□□□□ -1.02
CCNL1-223ENST00000481173 DNMT3LQ9UJW3 386 aa8.66□□□□□ -1.02
CCNL1-223ENST00000481173 SOS2Q07890 1332 aaPredicted RBP8.64□□□□□ -1.03
CCNL1-223ENST00000481173 TUSC1Q2TAM9 212 aa8.64□□□□□ -1.03
CCNL1-223ENST00000481173 POLR3EQ9NVU0 708 aa8.64□□□□□ -1.03
CCNL1-223ENST00000481173 MAP4K5Q9Y4K4 846 aa8.64□□□□□ -1.03
CCNL1-223ENST00000481173 CLK2P49760 499 aaKnown RBP8.63□□□□□ -1.03
CCNL1-223ENST00000481173 CCDC116Q8IYX3 515 aa8.63□□□□□ -1.03
CCNL1-223ENST00000481173 SLC24A3Q9HC58 644 aa8.63□□□□□ -1.03
CCNL1-223ENST00000481173 TRMT44Q8IYL2 757 aaKnown RBP8.62□□□□□ -1.03
CCNL1-223ENST00000481173 EMILIN1Q9Y6C2 1016 aa8.62□□□□□ -1.03
CCNL1-223ENST00000481173 CBLBQ13191 982 aa8.61□□□□□ -1.03
CCNL1-223ENST00000481173 ERFEQ4G0M1 354 aa8.61□□□□□ -1.03
CCNL1-223ENST00000481173 TSEN34Q9BSV6 310 aaKnown RBP8.61□□□□□ -1.03
CCNL1-223ENST00000481173 FIGNL2A6NMB9 653 aa8.6□□□□□ -1.03
CCNL1-223ENST00000481173 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
CCNL1-223ENST00000481173 PPP1R26Q5T8A7 1209 aaPredicted RBP8.6□□□□□ -1.03
CCNL1-223ENST00000481173 TTLL8A6PVC2 850 aa8.59□□□□□ -1.03
CCNL1-223ENST00000481173 KRT76Q01546 638 aa8.58□□□□□ -1.04
CCNL1-223ENST00000481173 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms