RNA–Protein interactions for RNA: ENST00000480911.5

CACNA1C-225, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5 BASIC

Gene CACNA1C, Length 6,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-225ENST00000480911 SMC4Q9NTJ3 1288 aa11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 HOMER1Q86YM7 354 aa11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 RPGRIP1LQ68CZ1 1315 aa11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 PPP2R1AP30153 589 aa11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 GPS2Q13227 327 aa11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 NLRP6P59044 892 aa11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 NOL8Q76FK4 1167 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 REC8O95072 547 aa11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 AMOTL1Q8IY63 956 aa11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 PARD3Q8TEW0 1356 aa11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 CAMSAP2Q08AD1 1489 aa11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 NAP1L1P55209 391 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 C8orf37Q96NL8 207 aa11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-225ENST00000480911 ABCC11Q96J66 1382 aa11.22□□□□□ -0.61
CACNA1C-225ENST00000480911 VPS37DQ86XT2 251 aa11.22□□□□□ -0.61
CACNA1C-225ENST00000480911 PUS7Q96PZ0 661 aaKnown RBP11.22□□□□□ -0.61
CACNA1C-225ENST00000480911 TRIM6-TRIM34B2RNG4 842 aa11.22□□□□□ -0.61
CACNA1C-225ENST00000480911 MCM2P49736 904 aa11.22□□□□□ -0.61
CACNA1C-225ENST00000480911 HSPA2P54652 639 aa11.22□□□□□ -0.61
CACNA1C-225ENST00000480911 POLD1P28340 1107 aa11.22□□□□□ -0.61
CACNA1C-225ENST00000480911 SLKQ9H2G2 1235 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-225ENST00000480911 KIF21AQ7Z4S6 1674 aa11.22□□□□□ -0.61
CACNA1C-225ENST00000480911 SLC52A1Q9NWF4 448 aa11.22□□□□□ -0.61
CACNA1C-225ENST00000480911 ADGRL2O95490 1459 aa11.21□□□□□ -0.61
CACNA1C-225ENST00000480911 ITPRIPQ8IWB1 547 aa11.21□□□□□ -0.62
CACNA1C-225ENST00000480911 TATP17735 454 aaPredicted RBP11.21□□□□□ -0.62
CACNA1C-225ENST00000480911 NSD2O96028 1365 aa11.2□□□□□ -0.62
CACNA1C-225ENST00000480911 FANCAO15360 1455 aa11.2□□□□□ -0.62
CACNA1C-225ENST00000480911 MBD3O95983 291 aa11.2□□□□□ -0.62
CACNA1C-225ENST00000480911 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
CACNA1C-225ENST00000480911 STK11IPQ8N1F8 1099 aa11.2□□□□□ -0.62
CACNA1C-225ENST00000480911 GRIN2AQ12879 1464 aa11.2□□□□□ -0.62
CACNA1C-225ENST00000480911 ANKRD62A6NC57 917 aa11.2□□□□□ -0.62
CACNA1C-225ENST00000480911 APAF1O14727 1248 aa11.2□□□□□ -0.62
CACNA1C-225ENST00000480911 IPO7O95373 1038 aaKnown RBP11.2□□□□□ -0.62
CACNA1C-225ENST00000480911 GCC1Q96CN9 775 aa11.2□□□□□ -0.62
CACNA1C-225ENST00000480911 CCDC191Q8NCU4 936 aa11.2□□□□□ -0.62
CACNA1C-225ENST00000480911 RRP9O43818 475 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-225ENST00000480911 SLFN5Q08AF3 891 aa11.19□□□□□ -0.62
CACNA1C-225ENST00000480911 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-225ENST00000480911 RUFY1Q96T51 708 aa11.19□□□□□ -0.62
CACNA1C-225ENST00000480911 BCCIPQ9P287 314 aaKnown RBP eCLIP11.19□□□□□ -0.62
CACNA1C-225ENST00000480911 ZRSR2Q15696 482 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-225ENST00000480911 C22orf23Q9BZE7 217 aa11.19□□□□□ -0.62
CACNA1C-225ENST00000480911 SKIDA1Q1XH10 827 aa11.19□□□□□ -0.62
CACNA1C-225ENST00000480911 CDR1P51861 262 aa11.18□□□□□ -0.62
CACNA1C-225ENST00000480911 ADGRL1O94910 1474 aa11.18□□□□□ -0.62
CACNA1C-225ENST00000480911 NEFHP12036 1026 aa11.18□□□□□ -0.62
CACNA1C-225ENST00000480911 IBSPP21815 317 aaPredicted RBP11.18□□□□□ -0.62
CACNA1C-225ENST00000480911 HMGN5P82970 282 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-225ENST00000480911 CCDC173Q0VFZ6 552 aa11.18□□□□□ -0.62
CACNA1C-225ENST00000480911 CCDC47Q96A33 483 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-225ENST00000480911 ADAMTS8Q9UP79 889 aa11.18□□□□□ -0.62
CACNA1C-225ENST00000480911 FAM135AQ9P2D6 1515 aa11.18□□□□□ -0.62
CACNA1C-225ENST00000480911 PTPRKQ15262 1439 aa11.18□□□□□ -0.62
CACNA1C-225ENST00000480911 DHX8Q14562 1220 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-225ENST00000480911 UNC13AQ9UPW8 1703 aa11.17□□□□□ -0.62
CACNA1C-225ENST00000480911 NKTRP30414 1462 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-225ENST00000480911 H3BQV1 296 aa11.17□□□□□ -0.62
CACNA1C-225ENST00000480911 RDXP35241 583 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-225ENST00000480911 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
CACNA1C-225ENST00000480911 MFAP1P55081 439 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-225ENST00000480911 RABEP1Q15276 862 aa11.17□□□□□ -0.62
CACNA1C-225ENST00000480911 PIK3C2GO75747 1445 aa11.17□□□□□ -0.62
CACNA1C-225ENST00000480911 KIF6Q6ZMV9 814 aa11.16□□□□□ -0.62
CACNA1C-225ENST00000480911 DISP3Q9P2K9 1392 aa11.16□□□□□ -0.62
CACNA1C-225ENST00000480911 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.16□□□□□ -0.62
CACNA1C-225ENST00000480911 GNAI1P63096 354 aa11.16□□□□□ -0.62
CACNA1C-225ENST00000480911 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 NEXNQ0ZGT2 675 aa11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 ZNF771Q7L3S4 317 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 XPCQ01831 940 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 FOXD4L5Q5VV16 416 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 FOXD4L4Q8WXT5 416 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 KIF3AQ9Y496 699 aa11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 SYNE3Q6ZMZ3 975 aa11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 ZNF644Q9H582 1327 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 LETM1O95202 739 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 SLC4A3P48751 1232 aa11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 COG6Q9Y2V7 657 aa11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 ZNF592Q92610 1267 aa11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 DDX49Q9Y6V7 483 aaKnown RBP11.15□□□□□ -0.62
CACNA1C-225ENST00000480911 SPATA31E1Q6ZUB1 1445 aa11.15□□□□□ -0.63
CACNA1C-225ENST00000480911 MCM5P33992 734 aa11.15□□□□□ -0.63
CACNA1C-225ENST00000480911 CDC45O75419 566 aa11.14□□□□□ -0.63
CACNA1C-225ENST00000480911 EPS15P42566 896 aa11.14□□□□□ -0.63
CACNA1C-225ENST00000480911 SPG7Q9UQ90 795 aa11.14□□□□□ -0.63
CACNA1C-225ENST00000480911 EIF2AK4Q9P2K8 1649 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-225ENST00000480911 GOLGA6L19H0YKK7 550 aa11.14□□□□□ -0.63
CACNA1C-225ENST00000480911 IL16Q14005 1332 aa11.13□□□□□ -0.63
CACNA1C-225ENST00000480911 INTS3Q68E01 1043 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-225ENST00000480911 MCM4P33991 863 aa11.13□□□□□ -0.63
CACNA1C-225ENST00000480911 CCDC27Q2M243 656 aa11.13□□□□□ -0.63
CACNA1C-225ENST00000480911 CCDC184Q52MB2 194 aa11.13□□□□□ -0.63
CACNA1C-225ENST00000480911 ANKRD20A12PQ8NF67 263 aa11.13□□□□□ -0.63
CACNA1C-225ENST00000480911 SCAF11Q99590 1463 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-225ENST00000480911 TRAK2O60296 914 aa11.12□□□□□ -0.63
CACNA1C-225ENST00000480911 FAM184AQ8NB25 1140 aa11.12□□□□□ -0.63
CACNA1C-225ENST00000480911 NCKAP5LQ9HCH0 1330 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms