RNA–Protein interactions for RNA: ENST00000480856.1

FNDC1-203, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 3

Gene FNDC1, Length 789 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-203ENST00000480856 NUTM2GQ5VZR2 741 aa22.75■■□□□ 1.23
FNDC1-203ENST00000480856 SLC24A1O60721 1099 aa22.74■■□□□ 1.23
FNDC1-203ENST00000480856 EIF4G2P78344 907 aaKnown RBP eCLIP22.74■■□□□ 1.23
FNDC1-203ENST00000480856 NGLY1Q96IV0 654 aa22.74■■□□□ 1.23
FNDC1-203ENST00000480856 USP6P35125 1406 aa22.73■■□□□ 1.23
FNDC1-203ENST00000480856 AFF2P51816 1311 aa22.72■■□□□ 1.23
FNDC1-203ENST00000480856 ABTB2Q8N961 1025 aa22.71■■□□□ 1.23
FNDC1-203ENST00000480856 RGS17Q9UGC6 210 aaPredicted RBP22.71■■□□□ 1.23
FNDC1-203ENST00000480856 HSPA5P11021 654 aaKnown RBP22.7■■□□□ 1.22
FNDC1-203ENST00000480856 POLR3GLQ9BT43 218 aa22.7■■□□□ 1.22
FNDC1-203ENST00000480856 SLC12A5Q9H2X9 1139 aa22.7■■□□□ 1.22
FNDC1-203ENST00000480856 KTN1Q86UP2 1357 aaKnown RBP22.7■■□□□ 1.22
FNDC1-203ENST00000480856 MON2Q7Z3U7 1717 aa22.68■■□□□ 1.22
FNDC1-203ENST00000480856 ZNF772Q68DY9 489 aaPredicted RBP22.68■■□□□ 1.22
FNDC1-203ENST00000480856 ILDR2Q71H61 639 aa22.68■■□□□ 1.22
FNDC1-203ENST00000480856 HDGFL2Q7Z4V5 671 aaPredicted RBP22.68■■□□□ 1.22
FNDC1-203ENST00000480856 CRYBG1Q9Y4K1 1723 aa22.68■■□□□ 1.22
FNDC1-203ENST00000480856 CDCA8Q53HL2 280 aa22.67■■□□□ 1.22
FNDC1-203ENST00000480856 ZNF692Q9BU19 519 aaPredicted RBP22.67■■□□□ 1.22
FNDC1-203ENST00000480856 PHRF1Q9P1Y6 1649 aaKnown RBP22.67■■□□□ 1.22
FNDC1-203ENST00000480856 POTEAQ6S8J7 498 aa22.66■■□□□ 1.22
FNDC1-203ENST00000480856 PUS7Q96PZ0 661 aaKnown RBP22.66■■□□□ 1.22
FNDC1-203ENST00000480856 TERF2IPQ9NYB0 399 aa22.66■■□□□ 1.22
FNDC1-203ENST00000480856 CPSF1Q10570 1443 aaKnown RBP22.65■■□□□ 1.22
FNDC1-203ENST00000480856 NRKQ7Z2Y5 1582 aa22.65■■□□□ 1.22
FNDC1-203ENST00000480856 PIK3C2AO00443 1686 aa22.65■■□□□ 1.22
FNDC1-203ENST00000480856 BRD4O60885 1362 aaPredicted RBP22.64■■□□□ 1.22
FNDC1-203ENST00000480856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.64■■□□□ 1.21
FNDC1-203ENST00000480856 PLCH1Q4KWH8 1693 aa22.63■■□□□ 1.21
FNDC1-203ENST00000480856 CD163L1Q9NR16 1453 aa22.63■■□□□ 1.21
FNDC1-203ENST00000480856 NLRP6P59044 892 aa22.63■■□□□ 1.21
FNDC1-203ENST00000480856 USP21Q9UK80 565 aa22.63■■□□□ 1.21
FNDC1-203ENST00000480856 A0A1W2PP64 1363 aa22.63■■□□□ 1.21
FNDC1-203ENST00000480856 NINLQ9Y2I6 1382 aa22.63■■□□□ 1.21
FNDC1-203ENST00000480856 TTC21BQ7Z4L5 1316 aa22.62■■□□□ 1.21
FNDC1-203ENST00000480856 NLRP13Q86W25 1043 aa22.62■■□□□ 1.21
FNDC1-203ENST00000480856 SSH2Q76I76 1423 aa22.6■■□□□ 1.21
FNDC1-203ENST00000480856 MYOM1P52179 1685 aa22.6■■□□□ 1.21
FNDC1-203ENST00000480856 TTC21AQ8NDW8 1320 aa22.59■■□□□ 1.21
FNDC1-203ENST00000480856 ZBTB7CA1YPR0 619 aa22.59■■□□□ 1.21
FNDC1-203ENST00000480856 ZC3H6P61129 1189 aaKnown RBP22.59■■□□□ 1.21
FNDC1-203ENST00000480856 PRDM11Q9NQV5 511 aa22.59■■□□□ 1.21
FNDC1-203ENST00000480856 SOX12O15370 315 aa22.58■■□□□ 1.21
FNDC1-203ENST00000480856 QTRT2Q9H974 415 aaKnown RBP22.58■■□□□ 1.21
FNDC1-203ENST00000480856 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
FNDC1-203ENST00000480856 FNBP4Q8N3X1 1017 aaPredicted RBP22.57■■□□□ 1.2
FNDC1-203ENST00000480856 COL14A1Q05707 1796 aaKnown RBP22.57■■□□□ 1.2
FNDC1-203ENST00000480856 KIAA0232Q92628 1395 aa22.56■■□□□ 1.2
FNDC1-203ENST00000480856 FAM83GA6ND36 823 aa22.56■■□□□ 1.2
FNDC1-203ENST00000480856 USP19O94966 1318 aa22.56■■□□□ 1.2
FNDC1-203ENST00000480856 ANKRD36BQ8N2N9 1353 aa22.55■■□□□ 1.2
FNDC1-203ENST00000480856 NWD2Q9ULI1 1742 aa22.55■■□□□ 1.2
FNDC1-203ENST00000480856 CHRNA2Q15822 529 aa22.55■■□□□ 1.2
FNDC1-203ENST00000480856 NME9Q86XW9 330 aa22.55■■□□□ 1.2
FNDC1-203ENST00000480856 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.54■■□□□ 1.2
FNDC1-203ENST00000480856 SLIT2O94813 1529 aa22.54■■□□□ 1.2
FNDC1-203ENST00000480856 RXRBP28702 533 aa22.54■■□□□ 1.2
FNDC1-203ENST00000480856 ZRANB1Q9UGI0 708 aa22.54■■□□□ 1.2
FNDC1-203ENST00000480856 TRPC5Q9UL62 973 aaPredicted RBP22.54■■□□□ 1.2
FNDC1-203ENST00000480856 BCL9LQ86UU0 1499 aa22.54■■□□□ 1.2
FNDC1-203ENST00000480856 GCP02774 474 aa22.53■■□□□ 1.2
FNDC1-203ENST00000480856 BTG4Q9NY30 223 aa22.53■■□□□ 1.2
FNDC1-203ENST00000480856 CCDC9Q9Y3X0 531 aaKnown RBP22.53■■□□□ 1.2
FNDC1-203ENST00000480856 UNC5CLQ8IV45 518 aa22.52■■□□□ 1.2
FNDC1-203ENST00000480856 SLIT3O75094 1523 aa22.52■■□□□ 1.19
FNDC1-203ENST00000480856 NRAPQ86VF7 1730 aa22.5■■□□□ 1.19
FNDC1-203ENST00000480856 ATRNO75882 1429 aa22.49■■□□□ 1.19
FNDC1-203ENST00000480856 RBM6P78332 1123 aaKnown RBP22.49■■□□□ 1.19
FNDC1-203ENST00000480856 KIF20BQ96Q89 1820 aa22.49■■□□□ 1.19
FNDC1-203ENST00000480856 C11orf95C9JLR9 678 aaPredicted RBP22.47■■□□□ 1.19
FNDC1-203ENST00000480856 KCNH5Q8NCM2 988 aa22.47■■□□□ 1.19
FNDC1-203ENST00000480856 STRN4Q9NRL3 753 aa22.47■■□□□ 1.19
FNDC1-203ENST00000480856 USP54Q70EL1 1684 aa22.46■■□□□ 1.19
FNDC1-203ENST00000480856 NSD3Q9BZ95 1437 aa22.46■■□□□ 1.19
FNDC1-203ENST00000480856 CPDO75976 1380 aa22.45■■□□□ 1.18
FNDC1-203ENST00000480856 USP31Q70CQ4 1352 aa22.45■■□□□ 1.18
FNDC1-203ENST00000480856 LTN1O94822 1766 aa22.44■■□□□ 1.18
FNDC1-203ENST00000480856 EVA1CP58658 441 aa22.44■■□□□ 1.18
FNDC1-203ENST00000480856 COG3Q96JB2 828 aa22.44■■□□□ 1.18
FNDC1-203ENST00000480856 GJD4Q96KN9 370 aaPredicted RBP22.44■■□□□ 1.18
FNDC1-203ENST00000480856 NFAT5O94916 1531 aa22.43■■□□□ 1.18
FNDC1-203ENST00000480856 KIF7Q2M1P5 1343 aa22.43■■□□□ 1.18
FNDC1-203ENST00000480856 GGNBP2Q9H3C7 697 aa22.43■■□□□ 1.18
FNDC1-203ENST00000480856 LMO7Q8WWI1 1683 aa22.42■■□□□ 1.18
FNDC1-203ENST00000480856 OVOS2A0A0J9YW53 1432 aa22.42■■□□□ 1.18
FNDC1-203ENST00000480856 OVOS2Q6IE36 1432 aa22.42■■□□□ 1.18
FNDC1-203ENST00000480856 VPS72Q15906 364 aa22.42■■□□□ 1.18
FNDC1-203ENST00000480856 GLI3P10071 1580 aa22.42■■□□□ 1.18
FNDC1-203ENST00000480856 RGS12O14924 1447 aa22.41■■□□□ 1.18
FNDC1-203ENST00000480856 RGPD5Q99666 1765 aa22.41■■□□□ 1.18
FNDC1-203ENST00000480856 A0A0G2JS52 829 aa22.41■■□□□ 1.18
FNDC1-203ENST00000480856 MYT1Q01538 1121 aa22.41■■□□□ 1.18
FNDC1-203ENST00000480856 CARD14Q9BXL6 1004 aa22.41■■□□□ 1.18
FNDC1-203ENST00000480856 CAMTA1Q9Y6Y1 1673 aa22.41■■□□□ 1.18
FNDC1-203ENST00000480856 CDK12Q9NYV4 1490 aaPredicted RBP22.4■■□□□ 1.18
FNDC1-203ENST00000480856 PANK3Q9H999 370 aa22.39■■□□□ 1.17
FNDC1-203ENST00000480856 FYB1O15117 783 aa22.38■■□□□ 1.17
FNDC1-203ENST00000480856 ARHGEF25Q86VW2 580 aa22.38■■□□□ 1.17
FNDC1-203ENST00000480856 USP35Q9P2H5 1018 aa22.38■■□□□ 1.17
FNDC1-203ENST00000480856 AATKQ6ZMQ8 1374 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms