RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 TNNT2P45379 298 aaPredicted RBP13.18□□□□□ -0.3
SIK3-210ENST00000480468 MYRIPQ8NFW9 859 aa13.18□□□□□ -0.3
SIK3-210ENST00000480468 ERVK-7P63135 1459 aa13.18□□□□□ -0.3
SIK3-210ENST00000480468 CAVIN1Q6NZI2 390 aaKnown RBP13.17□□□□□ -0.3
SIK3-210ENST00000480468 CARD14Q9BXL6 1004 aa13.17□□□□□ -0.3
SIK3-210ENST00000480468 ATP10BO94823 1461 aa13.17□□□□□ -0.3
SIK3-210ENST00000480468 GTF2F1P35269 517 aaKnown RBP eCLIP13.16□□□□□ -0.3
SIK3-210ENST00000480468 PRIMPOLQ96LW4 560 aa13.16□□□□□ -0.3
SIK3-210ENST00000480468 ZBTB40Q9NUA8 1239 aa13.16□□□□□ -0.3
SIK3-210ENST00000480468 ZHX1Q9UKY1 873 aaPredicted RBP13.16□□□□□ -0.3
SIK3-210ENST00000480468 CARMIL2Q6F5E8 1435 aa13.16□□□□□ -0.3
SIK3-210ENST00000480468 ADGRB2O60241 1585 aa13.16□□□□□ -0.3
SIK3-210ENST00000480468 TRIM27P14373 513 aa13.16□□□□□ -0.3
SIK3-210ENST00000480468 CDC42BPBQ9Y5S2 1711 aa13.16□□□□□ -0.3
SIK3-210ENST00000480468 PRIM1P49642 420 aaKnown RBP13.15□□□□□ -0.3
SIK3-210ENST00000480468 HMGN5P82970 282 aaKnown RBP13.15□□□□□ -0.3
SIK3-210ENST00000480468 LRSAM1Q6UWE0 723 aa13.15□□□□□ -0.3
SIK3-210ENST00000480468 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
SIK3-210ENST00000480468 CHD1LQ86WJ1 897 aa13.15□□□□□ -0.3
SIK3-210ENST00000480468 RRP7AQ9Y3A4 280 aaKnown RBP13.15□□□□□ -0.3
SIK3-210ENST00000480468 LETM1O95202 739 aaPredicted RBP13.15□□□□□ -0.31
SIK3-210ENST00000480468 NEUROD2Q15784 382 aa13.15□□□□□ -0.31
SIK3-210ENST00000480468 MCTP1Q6DN14 999 aa13.15□□□□□ -0.31
SIK3-210ENST00000480468 TRPM2O94759 1503 aa13.14□□□□□ -0.31
SIK3-210ENST00000480468 ZNF518AQ6AHZ1 1483 aa13.14□□□□□ -0.31
SIK3-210ENST00000480468 KIAA2012Q0VF49 1180 aa13.14□□□□□ -0.31
SIK3-210ENST00000480468 RABEP1Q15276 862 aa13.14□□□□□ -0.31
SIK3-210ENST00000480468 CWC22Q9HCG8 908 aaKnown RBP13.14□□□□□ -0.31
SIK3-210ENST00000480468 PRDM10Q9NQV6 1147 aa13.14□□□□□ -0.31
SIK3-210ENST00000480468 YEATS2Q9ULM3 1422 aa13.14□□□□□ -0.31
SIK3-210ENST00000480468 SBNO2Q9Y2G9 1366 aa13.14□□□□□ -0.31
SIK3-210ENST00000480468 ITPRIPQ8IWB1 547 aa13.13□□□□□ -0.31
SIK3-210ENST00000480468 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
SIK3-210ENST00000480468 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
SIK3-210ENST00000480468 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
SIK3-210ENST00000480468 NOS1P29475 1434 aa13.13□□□□□ -0.31
SIK3-210ENST00000480468 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
SIK3-210ENST00000480468 SMC4Q9NTJ3 1288 aa13.13□□□□□ -0.31
SIK3-210ENST00000480468 NEURL4Q96JN8 1562 aa13.13□□□□□ -0.31
SIK3-210ENST00000480468 TBC1D9Q6ZT07 1266 aa13.12□□□□□ -0.31
SIK3-210ENST00000480468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.31
SIK3-210ENST00000480468 ABCC11Q96J66 1382 aa13.12□□□□□ -0.31
SIK3-210ENST00000480468 LNPKQ9C0E8 428 aa13.12□□□□□ -0.31
SIK3-210ENST00000480468 MYO3AQ8NEV4 1616 aa13.12□□□□□ -0.31
SIK3-210ENST00000480468 SYCP2Q9BX26 1530 aa13.11□□□□□ -0.31
SIK3-210ENST00000480468 GCC1Q96CN9 775 aa13.11□□□□□ -0.31
SIK3-210ENST00000480468 GPT2Q8TD30 523 aa13.11□□□□□ -0.31
SIK3-210ENST00000480468 IPO8O15397 1037 aaKnown RBP13.1□□□□□ -0.31
SIK3-210ENST00000480468 PPP4R3BQ5MIZ7 849 aa13.1□□□□□ -0.31
SIK3-210ENST00000480468 TAF3Q5VWG9 929 aa13.1□□□□□ -0.31
SIK3-210ENST00000480468 MORC1Q86VD1 984 aa13.1□□□□□ -0.31
SIK3-210ENST00000480468 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
SIK3-210ENST00000480468 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
SIK3-210ENST00000480468 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
SIK3-210ENST00000480468 MED14O60244 1454 aa13.1□□□□□ -0.31
SIK3-210ENST00000480468 PTPRTO14522 1441 aa13.09□□□□□ -0.31
SIK3-210ENST00000480468 CDC45O75419 566 aa13.09□□□□□ -0.31
SIK3-210ENST00000480468 MBD3O95983 291 aa13.09□□□□□ -0.31
SIK3-210ENST00000480468 ZNF710Q8N1W2 664 aa13.09□□□□□ -0.31
SIK3-210ENST00000480468 TMEM57Q8N5G2 664 aa13.09□□□□□ -0.31
SIK3-210ENST00000480468 IL16Q14005 1332 aa13.09□□□□□ -0.31
SIK3-210ENST00000480468 AK9Q5TCS8 1911 aa13.08□□□□□ -0.32
SIK3-210ENST00000480468 PIBF1Q8WXW3 757 aa13.08□□□□□ -0.32
SIK3-210ENST00000480468 CHMP4BQ9H444 224 aaKnown RBP13.08□□□□□ -0.32
SIK3-210ENST00000480468 ARID3AQ99856 593 aa13.08□□□□□ -0.32
SIK3-210ENST00000480468 TMEM63CQ9P1W3 806 aa13.08□□□□□ -0.32
SIK3-210ENST00000480468 NSD3Q9BZ95 1437 aa13.07□□□□□ -0.32
SIK3-210ENST00000480468 ERCC6Q03468 1493 aa13.07□□□□□ -0.32
SIK3-210ENST00000480468 PRPF40AO75400 957 aaKnown RBP13.07□□□□□ -0.32
SIK3-210ENST00000480468 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
SIK3-210ENST00000480468 NOB1Q9ULX3 412 aaKnown RBP13.07□□□□□ -0.32
SIK3-210ENST00000480468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.07□□□□□ -0.322e-6■■■■□ 20.5
SIK3-210ENST00000480468 MYOM2P54296 1465 aa13.07□□□□□ -0.32
SIK3-210ENST00000480468 MRC2Q9UBG0 1479 aa13.07□□□□□ -0.32
SIK3-210ENST00000480468 PPRC1Q5VV67 1664 aaKnown RBP13.06□□□□□ -0.32
SIK3-210ENST00000480468 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
SIK3-210ENST00000480468 SYCE3A1L190 88 aa13.05□□□□□ -0.32
SIK3-210ENST00000480468 PTMAP06454 111 aaKnown RBP13.05□□□□□ -0.32
SIK3-210ENST00000480468 BRPF1P55201 1214 aaPredicted RBP13.05□□□□□ -0.32
SIK3-210ENST00000480468 ALDH1L2Q3SY69 923 aa13.05□□□□□ -0.32
SIK3-210ENST00000480468 SPTLC3Q9NUV7 552 aa13.05□□□□□ -0.32
SIK3-210ENST00000480468 KIF3AQ9Y496 699 aa13.05□□□□□ -0.32
SIK3-210ENST00000480468 UVSSAQ2YD98 709 aa13.05□□□□□ -0.32
SIK3-210ENST00000480468 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
SIK3-210ENST00000480468 PDE4CQ08493 712 aa13.04□□□□□ -0.32
SIK3-210ENST00000480468 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
SIK3-210ENST00000480468 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
SIK3-210ENST00000480468 TSPY26PQ9H489 355 aa13.04□□□□□ -0.32
SIK3-210ENST00000480468 INO80Q9ULG1 1556 aaPredicted RBP13.04□□□□□ -0.32
SIK3-210ENST00000480468 MAP3K4Q9Y6R4 1608 aa13.04□□□□□ -0.32
SIK3-210ENST00000480468 GTF2E1P29083 439 aaPredicted RBP13.04□□□□□ -0.32
SIK3-210ENST00000480468 MTHFSP49914 203 aa13.04□□□□□ -0.32
SIK3-210ENST00000480468 CBX1P83916 185 aa13.04□□□□□ -0.32
SIK3-210ENST00000480468 NOLC1Q14978 699 aaKnown RBP eCLIP13.04□□□□□ -0.32
SIK3-210ENST00000480468 DNTTIP2Q5QJE6 756 aaKnown RBP13.04□□□□□ -0.32
SIK3-210ENST00000480468 ANKRD45Q5TZF3 282 aa13.04□□□□□ -0.32
SIK3-210ENST00000480468 BBXQ8WY36 941 aaPredicted RBP13.04□□□□□ -0.32
SIK3-210ENST00000480468 ZDHHC9Q9Y397 364 aa13.04□□□□□ -0.32
SIK3-210ENST00000480468 NSD2O96028 1365 aa13.03□□□□□ -0.32
SIK3-210ENST00000480468 ABCA6Q8N139 1617 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms