RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 CDCA7LQ96GN5 454 aa36.76■■■■□ 3.48
TNFRSF25-213ENST00000480393 IRX6P78412 446 aaPredicted RBP36.76■■■■□ 3.47
TNFRSF25-213ENST00000480393 NGEFQ8N5V2 710 aa36.76■■■■□ 3.47
TNFRSF25-213ENST00000480393 FMN2Q9NZ56 1722 aa36.75■■■■□ 3.47
TNFRSF25-213ENST00000480393 USP6P35125 1406 aa36.75■■■■□ 3.47
TNFRSF25-213ENST00000480393 RUNDC1Q96C34 613 aa36.73■■■■□ 3.47
TNFRSF25-213ENST00000480393 NALCNQ8IZF0 1738 aa36.72■■■■□ 3.47
TNFRSF25-213ENST00000480393 TTC21BQ7Z4L5 1316 aa36.72■■■■□ 3.47
TNFRSF25-213ENST00000480393 U2AF1L5P0DN76 240 aaPredicted RBP36.72■■■■□ 3.47
TNFRSF25-213ENST00000480393 U2AF1Q01081 240 aaKnown RBP eCLIP36.72■■■■□ 3.47
TNFRSF25-213ENST00000480393 ZNF521Q96K83 1311 aa36.71■■■■□ 3.47
TNFRSF25-213ENST00000480393 ZRANB1Q9UGI0 708 aa36.71■■■■□ 3.47
TNFRSF25-213ENST00000480393 PNPLA6Q8IY17 1366 aa36.69■■■■□ 3.46
TNFRSF25-213ENST00000480393 GOLGA2Q08379 1002 aa36.68■■■■□ 3.46
TNFRSF25-213ENST00000480393 PMFBP1Q8TBY8 1022 aa36.68■■■■□ 3.46
TNFRSF25-213ENST00000480393 RGPD8O14715 1765 aaPredicted RBP36.68■■■■□ 3.46
TNFRSF25-213ENST00000480393 NGDNQ8NEJ9 315 aaKnown RBP36.68■■■■□ 3.46
TNFRSF25-213ENST00000480393 AATKQ6ZMQ8 1374 aa36.67■■■■□ 3.46
TNFRSF25-213ENST00000480393 U2SURPO15042 1029 aaKnown RBP36.67■■■■□ 3.46
TNFRSF25-213ENST00000480393 DIAPH1O60610 1272 aaKnown RBP36.67■■■■□ 3.46
TNFRSF25-213ENST00000480393 ERICH6BQ5W0A0 696 aa36.67■■■■□ 3.46
TNFRSF25-213ENST00000480393 POLKQ9UBT6 870 aa36.67■■■■□ 3.46
TNFRSF25-213ENST00000480393 NWD1Q149M9 1564 aa36.67■■■■□ 3.46
TNFRSF25-213ENST00000480393 IQSEC2Q5JU85 1478 aa36.66■■■■□ 3.46
TNFRSF25-213ENST00000480393 PPM1GO15355 546 aaPredicted RBP36.65■■■■□ 3.46
TNFRSF25-213ENST00000480393 ADGRL3Q9HAR2 1447 aa36.65■■■■□ 3.46
TNFRSF25-213ENST00000480393 RNF123Q5XPI4 1314 aa36.65■■■■□ 3.46
TNFRSF25-213ENST00000480393 RCAN3Q9UKA8 241 aa36.64■■■■□ 3.46
TNFRSF25-213ENST00000480393 TTC21AQ8NDW8 1320 aa36.62■■■■□ 3.45
TNFRSF25-213ENST00000480393 MAP2P11137 1827 aaKnown RBP36.62■■■■□ 3.45
TNFRSF25-213ENST00000480393 CDK12Q9NYV4 1490 aaPredicted RBP36.61■■■■□ 3.45
TNFRSF25-213ENST00000480393 FBLN1P23142 703 aa36.61■■■■□ 3.45
TNFRSF25-213ENST00000480393 SSH2Q76I76 1423 aa36.6■■■■□ 3.45
TNFRSF25-213ENST00000480393 TCP11L2Q8N4U5 519 aa36.6■■■■□ 3.45
TNFRSF25-213ENST00000480393 OVOS2A0A0J9YW53 1432 aa36.6■■■■□ 3.45
TNFRSF25-213ENST00000480393 OVOS2Q6IE36 1432 aa36.6■■■■□ 3.45
TNFRSF25-213ENST00000480393 RBM33Q96EV2 1170 aaKnown RBP36.59■■■■□ 3.45
TNFRSF25-213ENST00000480393 EMILIN1Q9Y6C2 1016 aa36.59■■■■□ 3.45
TNFRSF25-213ENST00000480393 C14orf37Q86TY3 774 aa36.58■■■■□ 3.45
TNFRSF25-213ENST00000480393 SLFN5Q08AF3 891 aa36.55■■■■□ 3.44
TNFRSF25-213ENST00000480393 PELP1Q8IZL8 1130 aaKnown RBP36.55■■■■□ 3.44
TNFRSF25-213ENST00000480393 DUSP27Q5VZP5 1158 aa36.54■■■■□ 3.44
TNFRSF25-213ENST00000480393 NEUROD2Q15784 382 aa36.54■■■■□ 3.44
TNFRSF25-213ENST00000480393 PNNQ9H307 717 aaKnown RBP36.54■■■■□ 3.44
TNFRSF25-213ENST00000480393 RRP7AQ9Y3A4 280 aaKnown RBP36.54■■■■□ 3.44
TNFRSF25-213ENST00000480393 MAPK8IP3Q9UPT6 1336 aa36.52■■■■□ 3.44
TNFRSF25-213ENST00000480393 RRS1Q15050 365 aaKnown RBP36.52■■■■□ 3.44
TNFRSF25-213ENST00000480393 WWC1Q8IX03 1113 aa36.52■■■■□ 3.44
TNFRSF25-213ENST00000480393 E9PSI1 815 aa36.51■■■■□ 3.44
TNFRSF25-213ENST00000480393 RRP1P56182 461 aaKnown RBP36.51■■■■□ 3.43
TNFRSF25-213ENST00000480393 PHF8Q9UPP1 1060 aa36.49■■■■□ 3.43
TNFRSF25-213ENST00000480393 NCBP3Q53F19 620 aaKnown RBP36.48■■■■□ 3.43
TNFRSF25-213ENST00000480393 PROSER2Q86WR7 435 aaPredicted RBP36.48■■■■□ 3.43
TNFRSF25-213ENST00000480393 USP31Q70CQ4 1352 aa36.48■■■■□ 3.43
TNFRSF25-213ENST00000480393 CCDC27Q2M243 656 aa36.47■■■■□ 3.43
TNFRSF25-213ENST00000480393 PLEKHF1Q96S99 279 aa36.47■■■■□ 3.43
TNFRSF25-213ENST00000480393 PPP4R2Q9NY27 417 aa36.47■■■■□ 3.43
TNFRSF25-213ENST00000480393 TRMT2AQ8IZ69 625 aaKnown RBP36.46■■■■□ 3.43
TNFRSF25-213ENST00000480393 PIK3C2AO00443 1686 aa36.45■■■■□ 3.43
TNFRSF25-213ENST00000480393 KDM4FA0A1W2PPD8 638 aa36.45■■■■□ 3.43
TNFRSF25-213ENST00000480393 HSPA2P54652 639 aa36.44■■■■□ 3.42
TNFRSF25-213ENST00000480393 PHF23Q9BUL5 403 aaPredicted RBP36.44■■■■□ 3.42
TNFRSF25-213ENST00000480393 LRRC7Q96NW7 1537 aa36.44■■■■□ 3.42
TNFRSF25-213ENST00000480393 FCHSD2O94868 740 aa36.43■■■■□ 3.42
TNFRSF25-213ENST00000480393 IL13P35225 146 aa36.42■■■■□ 3.42
TNFRSF25-213ENST00000480393 SPINK5Q9NQ38 1064 aaPredicted RBP36.42■■■■□ 3.42
TNFRSF25-213ENST00000480393 WDR63Q8IWG1 891 aa36.42■■■■□ 3.42
TNFRSF25-213ENST00000480393 DMRT2Q9Y5R5 561 aa36.42■■■■□ 3.42
TNFRSF25-213ENST00000480393 NEFMP07197 916 aa36.41■■■■□ 3.42
TNFRSF25-213ENST00000480393 ESCO1Q5FWF5 840 aa36.4■■■■□ 3.42
TNFRSF25-213ENST00000480393 SOX12O15370 315 aa36.37■■■■□ 3.41
TNFRSF25-213ENST00000480393 TMPOP42166 694 aaKnown RBP36.37■■■■□ 3.41
TNFRSF25-213ENST00000480393 RSPH6AQ9H0K4 717 aa36.37■■■■□ 3.41
TNFRSF25-213ENST00000480393 PAK3O75914 559 aaPredicted RBP36.37■■■■□ 3.41
TNFRSF25-213ENST00000480393 PRKAR2BP31323 418 aa36.36■■■■□ 3.41
TNFRSF25-213ENST00000480393 NLRP6P59044 892 aa36.36■■■■□ 3.41
TNFRSF25-213ENST00000480393 LMTK3Q96Q04 1460 aa36.34■■■■□ 3.41
TNFRSF25-213ENST00000480393 USP54Q70EL1 1684 aa36.34■■■■□ 3.41
TNFRSF25-213ENST00000480393 PEAK1Q9H792 1746 aa36.33■■■■□ 3.41
TNFRSF25-213ENST00000480393 HMOX1P09601 288 aa36.33■■■■□ 3.41
TNFRSF25-213ENST00000480393 ABTB2Q8N961 1025 aa36.32■■■■□ 3.4
TNFRSF25-213ENST00000480393 C19orf44Q9H6X5 657 aa36.31■■■■□ 3.4
TNFRSF25-213ENST00000480393 PSME1Q06323 249 aa36.3■■■■□ 3.4
TNFRSF25-213ENST00000480393 MAP3K19Q56UN5 1328 aa36.29■■■■□ 3.4
TNFRSF25-213ENST00000480393 EIF4A2Q14240 407 aaKnown RBP36.28■■■■□ 3.4
TNFRSF25-213ENST00000480393 SBNO1A3KN83 1393 aa36.28■■■■□ 3.4
TNFRSF25-213ENST00000480393 STRCP1A6NGW2 1772 aa36.28■■■■□ 3.4
TNFRSF25-213ENST00000480393 TMEM94Q12767 1356 aa36.28■■■■□ 3.4
TNFRSF25-213ENST00000480393 RIPK4P57078 832 aa36.28■■■■□ 3.4
TNFRSF25-213ENST00000480393 NUTM2GQ5VZR2 741 aa36.28■■■■□ 3.4
TNFRSF25-213ENST00000480393 MYH16Q9H6N6 1097 aa36.28■■■■□ 3.4
TNFRSF25-213ENST00000480393 MARF1Q9Y4F3 1742 aaKnown RBP36.27■■■■□ 3.4
TNFRSF25-213ENST00000480393 FLT4P35916 1363 aa36.26■■■■□ 3.4
TNFRSF25-213ENST00000480393 NCOA3Q9Y6Q9 1424 aa36.25■■■■□ 3.39
TNFRSF25-213ENST00000480393 ORAI2Q96SN7 254 aa36.25■■■■□ 3.39
TNFRSF25-213ENST00000480393 TRIM35Q9UPQ4 493 aa36.25■■■■□ 3.39
TNFRSF25-213ENST00000480393 KIF1AQ12756 1690 aa36.24■■■■□ 3.39
TNFRSF25-213ENST00000480393 C1orf167Q5SNV9 1468 aa36.23■■■■□ 3.39
TNFRSF25-213ENST00000480393 PLIN1O60240 522 aa36.23■■■■□ 3.39
TNFRSF25-213ENST00000480393 AMPHP49418 695 aa36.23■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms