RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
CD46-214ENST00000480003 ADGRB2O60241 1585 aa13.37□□□□□ -0.27
CD46-214ENST00000480003 TULP4Q9NRJ4 1543 aa13.36□□□□□ -0.27
CD46-214ENST00000480003 ORAI2Q96SN7 254 aa13.35□□□□□ -0.27
CD46-214ENST00000480003 CABP1Q9NZU7 370 aa13.35□□□□□ -0.27
CD46-214ENST00000480003 MST1RQ04912 1400 aa13.35□□□□□ -0.27
CD46-214ENST00000480003 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
CD46-214ENST00000480003 C1orf167Q5SNV9 1468 aa13.35□□□□□ -0.27
CD46-214ENST00000480003 QRICH2Q9H0J4 1663 aa13.34□□□□□ -0.27
CD46-214ENST00000480003 NALCNQ8IZF0 1738 aa13.34□□□□□ -0.27
CD46-214ENST00000480003 ANKARQ7Z5J8 1434 aa13.34□□□□□ -0.27
CD46-214ENST00000480003 ZNF316A6NFI3 1004 aaPredicted RBP13.34□□□□□ -0.27
CD46-214ENST00000480003 SLC12A5Q9H2X9 1139 aa13.34□□□□□ -0.27
CD46-214ENST00000480003 WASHC2AQ641Q2 1341 aa13.34□□□□□ -0.27
CD46-214ENST00000480003 ATAD2Q6PL18 1390 aa13.33□□□□□ -0.27
CD46-214ENST00000480003 CDC42BPGQ6DT37 1551 aa13.33□□□□□ -0.28
CD46-214ENST00000480003 PIP4K2BP78356 416 aa13.33□□□□□ -0.28
CD46-214ENST00000480003 ESCO1Q5FWF5 840 aa13.33□□□□□ -0.28
CD46-214ENST00000480003 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
CD46-214ENST00000480003 PHF8Q9UPP1 1060 aa13.33□□□□□ -0.28
CD46-214ENST00000480003 HSPA1LP34931 641 aa13.32□□□□□ -0.28
CD46-214ENST00000480003 BRINP3Q76B58 766 aa13.32□□□□□ -0.28
CD46-214ENST00000480003 CCDC7Q96M83 1385 aa13.32□□□□□ -0.28
CD46-214ENST00000480003 ZNF579Q8NAF0 562 aaKnown RBP13.31□□□□□ -0.28
CD46-214ENST00000480003 PMFBP1Q8TBY8 1022 aa13.31□□□□□ -0.28
CD46-214ENST00000480003 ATP7BP35670 1465 aa13.3□□□□□ -0.28
CD46-214ENST00000480003 FMN2Q9NZ56 1722 aa13.3□□□□□ -0.28
CD46-214ENST00000480003 TMC1Q8TDI8 760 aa13.29□□□□□ -0.28
CD46-214ENST00000480003 ACEP12821 1306 aa13.29□□□□□ -0.28
CD46-214ENST00000480003 USP32Q8NFA0 1604 aa13.28□□□□□ -0.28
CD46-214ENST00000480003 FOXO3O43524 673 aa13.28□□□□□ -0.28
CD46-214ENST00000480003 POLR3GLQ9BT43 218 aa13.28□□□□□ -0.28
CD46-214ENST00000480003 POLR3AO14802 1390 aaPredicted RBP13.28□□□□□ -0.28
CD46-214ENST00000480003 PPIP5K1Q6PFW1 1433 aa13.28□□□□□ -0.28
CD46-214ENST00000480003 NGDNQ8NEJ9 315 aaKnown RBP13.27□□□□□ -0.29
CD46-214ENST00000480003 PANK3Q9H999 370 aa13.27□□□□□ -0.29
CD46-214ENST00000480003 NINLQ9Y2I6 1382 aa13.27□□□□□ -0.29
CD46-214ENST00000480003 CPSF1Q10570 1443 aaKnown RBP13.27□□□□□ -0.29
CD46-214ENST00000480003 PER1O15534 1290 aaPredicted RBP13.26□□□□□ -0.29
CD46-214ENST00000480003 MIER1Q8N108 512 aa13.26□□□□□ -0.29
CD46-214ENST00000480003 CARD14Q9BXL6 1004 aa13.26□□□□□ -0.29
CD46-214ENST00000480003 CD163L1Q9NR16 1453 aa13.25□□□□□ -0.29
CD46-214ENST00000480003 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
CD46-214ENST00000480003 KRT28Q7Z3Y7 464 aa13.25□□□□□ -0.29
CD46-214ENST00000480003 DDX17Q92841 729 aaKnown RBP13.25□□□□□ -0.29
CD46-214ENST00000480003 TERF2IPQ9NYB0 399 aa13.25□□□□□ -0.29
CD46-214ENST00000480003 RGPD8O14715 1765 aaPredicted RBP13.25□□□□□ -0.29
CD46-214ENST00000480003 SOS2Q07890 1332 aaPredicted RBP13.24□□□□□ -0.29
CD46-214ENST00000480003 PSME1Q06323 249 aa13.24□□□□□ -0.29
CD46-214ENST00000480003 HDGFL2Q7Z4V5 671 aaPredicted RBP13.24□□□□□ -0.29
CD46-214ENST00000480003 ANKRD36BQ8N2N9 1353 aa13.23□□□□□ -0.29
CD46-214ENST00000480003 NPHP3Q7Z494 1330 aa13.23□□□□□ -0.29
CD46-214ENST00000480003 DDX10Q13206 875 aaKnown RBP13.23□□□□□ -0.29
CD46-214ENST00000480003 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
CD46-214ENST00000480003 BRD4O60885 1362 aaPredicted RBP13.22□□□□□ -0.29
CD46-214ENST00000480003 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
CD46-214ENST00000480003 MED1Q15648 1581 aaPredicted RBP13.22□□□□□ -0.29
CD46-214ENST00000480003 A0A1W2PP64 1363 aa13.21□□□□□ -0.29
CD46-214ENST00000480003 TTC21BQ7Z4L5 1316 aa13.21□□□□□ -0.29
CD46-214ENST00000480003 CLCN6P51797 869 aa13.21□□□□□ -0.29
CD46-214ENST00000480003 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.3
CD46-214ENST00000480003 KTN1Q86UP2 1357 aaKnown RBP13.2□□□□□ -0.3
CD46-214ENST00000480003 XPCQ01831 940 aaPredicted RBP13.2□□□□□ -0.3
CD46-214ENST00000480003 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
CD46-214ENST00000480003 USP6P35125 1406 aa13.2□□□□□ -0.3
CD46-214ENST00000480003 SBNO1A3KN83 1393 aa13.2□□□□□ -0.3
CD46-214ENST00000480003 FYB1O15117 783 aa13.19□□□□□ -0.3
CD46-214ENST00000480003 LRRC59Q96AG4 307 aaKnown RBP13.19□□□□□ -0.3
CD46-214ENST00000480003 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
CD46-214ENST00000480003 SPATA31A3Q5VYP0 1347 aa13.18□□□□□ -0.3
CD46-214ENST00000480003 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
CD46-214ENST00000480003 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
CD46-214ENST00000480003 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
CD46-214ENST00000480003 KNSTRNQ9Y448 316 aa13.17□□□□□ -0.3
CD46-214ENST00000480003 PXDNQ92626 1479 aa13.16□□□□□ -0.3
CD46-214ENST00000480003 ITSN1Q15811 1721 aa13.16□□□□□ -0.3
CD46-214ENST00000480003 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
CD46-214ENST00000480003 MYOM1P52179 1685 aa13.16□□□□□ -0.3
CD46-214ENST00000480003 KIF1AQ12756 1690 aa13.16□□□□□ -0.3
CD46-214ENST00000480003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.16□□□□□ -0.31e-6■■■□□ 18.3
CD46-214ENST00000480003 AHDC1Q5TGY3 1603 aaPredicted RBP13.16□□□□□ -0.3
CD46-214ENST00000480003 NME9Q86XW9 330 aa13.15□□□□□ -0.3
CD46-214ENST00000480003 ABTB2Q8N961 1025 aa13.15□□□□□ -0.3
CD46-214ENST00000480003 USP31Q70CQ4 1352 aa13.15□□□□□ -0.3
CD46-214ENST00000480003 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
CD46-214ENST00000480003 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
CD46-214ENST00000480003 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
CD46-214ENST00000480003 AKAP12Q02952 1782 aa13.13□□□□□ -0.31
CD46-214ENST00000480003 NPC1L1Q9UHC9 1359 aa13.13□□□□□ -0.31
CD46-214ENST00000480003 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
CD46-214ENST00000480003 NLRP6P59044 892 aa13.13□□□□□ -0.31
CD46-214ENST00000480003 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
CD46-214ENST00000480003 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
CD46-214ENST00000480003 NUTM2GQ5VZR2 741 aa13.12□□□□□ -0.31
CD46-214ENST00000480003 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
CD46-214ENST00000480003 GGNBP2Q9H3C7 697 aa13.12□□□□□ -0.31
CD46-214ENST00000480003 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
CD46-214ENST00000480003 TNS3Q68CZ2 1445 aa13.12□□□□□ -0.31
CD46-214ENST00000480003 LMOD2Q6P5Q4 547 aa13.11□□□□□ -0.31
CD46-214ENST00000480003 ARHGEF10O15013 1369 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms