RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 LTKP29376 864 aa7.54□□□□□ -1.2
CPS1-207ENST00000479988 GORABQ5T7V8 394 aa7.54□□□□□ -1.2
CPS1-207ENST00000479988 VSIG10Q8N0Z9 540 aa7.54□□□□□ -1.2
CPS1-207ENST00000479988 TMOD3Q9NYL9 352 aa7.54□□□□□ -1.2
CPS1-207ENST00000479988 IPO8O15397 1037 aaKnown RBP7.54□□□□□ -1.2
CPS1-207ENST00000479988 CDCA7Q9BWT1 371 aaPredicted RBP7.54□□□□□ -1.2
CPS1-207ENST00000479988 ARHGEF10O15013 1369 aa7.54□□□□□ -1.2
CPS1-207ENST00000479988 TCERG1O14776 1098 aaKnown RBP7.54□□□□□ -1.2
CPS1-207ENST00000479988 MTHFSP49914 203 aa7.54□□□□□ -1.2
CPS1-207ENST00000479988 FRAT1Q92837 279 aaPredicted RBP7.54□□□□□ -1.2
CPS1-207ENST00000479988 PUS7Q96PZ0 661 aaKnown RBP7.54□□□□□ -1.2
CPS1-207ENST00000479988 ACEP12821 1306 aa7.53□□□□□ -1.2
CPS1-207ENST00000479988 RRP1P56182 461 aaKnown RBP7.53□□□□□ -1.2
CPS1-207ENST00000479988 TESK2Q96S53 571 aa7.53□□□□□ -1.2
CPS1-207ENST00000479988 UNC13BO14795 1591 aa7.53□□□□□ -1.2
CPS1-207ENST00000479988 AK7Q96M32 723 aa7.53□□□□□ -1.2
CPS1-207ENST00000479988 QTRT2Q9H974 415 aaKnown RBP7.53□□□□□ -1.2
CPS1-207ENST00000479988 PTPRMP28827 1452 aa7.53□□□□□ -1.2
CPS1-207ENST00000479988 EIF2S2P20042 333 aaKnown RBP7.53□□□□□ -1.2
CPS1-207ENST00000479988 PPP2R1AP30153 589 aa7.53□□□□□ -1.2
CPS1-207ENST00000479988 CDC42BPBQ9Y5S2 1711 aa7.53□□□□□ -1.2
CPS1-207ENST00000479988 PARD3Q8TEW0 1356 aa7.53□□□□□ -1.2
CPS1-207ENST00000479988 BTG4Q9NY30 223 aa7.53□□□□□ -1.2
CPS1-207ENST00000479988 IQGAP3Q86VI3 1631 aa7.52□□□□□ -1.2
CPS1-207ENST00000479988 HMOX1P09601 288 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 KCNJ4P48050 445 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 KIF6Q6ZMV9 814 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 CABLES1Q8TDN4 633 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 STK32BQ9NY57 414 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 COL17A1Q9UMD9 1497 aaPredicted RBP7.52□□□□□ -1.21
CPS1-207ENST00000479988 TTC21AQ8NDW8 1320 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 KDM5CP41229 1560 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 NPATQ14207 1427 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 E9PSI1 815 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 PDIA4P13667 645 aaKnown RBP7.52□□□□□ -1.21
CPS1-207ENST00000479988 DIP2BQ9P265 1576 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 SENP3-EIF4A1A0A087X0R7 540 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 KDM4FA0A1W2PPD8 638 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 ISY1Q9ULR0 285 aaKnown RBP7.52□□□□□ -1.21
CPS1-207ENST00000479988 NPC1L1Q9UHC9 1359 aa7.52□□□□□ -1.21
CPS1-207ENST00000479988 ORAI2Q96SN7 254 aa7.51□□□□□ -1.21
CPS1-207ENST00000479988 PTPRTO14522 1441 aa7.51□□□□□ -1.21
CPS1-207ENST00000479988 ZPR1O75312 459 aa7.51□□□□□ -1.21
CPS1-207ENST00000479988 STARD3NLO95772 234 aa7.51□□□□□ -1.21
CPS1-207ENST00000479988 EFCAB6Q5THR3 1501 aa7.51□□□□□ -1.21
CPS1-207ENST00000479988 SMARCC1Q92922 1105 aaPredicted RBP7.51□□□□□ -1.21
CPS1-207ENST00000479988 ANP32EQ9BTT0 268 aa7.51□□□□□ -1.21
CPS1-207ENST00000479988 TRPM2O94759 1503 aa7.51□□□□□ -1.21
CPS1-207ENST00000479988 PER1O15534 1290 aaPredicted RBP7.5□□□□□ -1.21
CPS1-207ENST00000479988 MPRIPQ6WCQ1 1025 aa7.5□□□□□ -1.21
CPS1-207ENST00000479988 DDRGK1Q96HY6 314 aa7.5□□□□□ -1.21
CPS1-207ENST00000479988 GLI2P10070 1586 aa7.5□□□□□ -1.21
CPS1-207ENST00000479988 SULT6B1Q6IMI4 303 aa7.5□□□□□ -1.21
CPS1-207ENST00000479988 ZRANB1Q9UGI0 708 aa7.5□□□□□ -1.21
CPS1-207ENST00000479988 TSPYL4Q9UJ04 414 aa7.5□□□□□ -1.21
CPS1-207ENST00000479988 A2ML1A8K2U0 1454 aa7.5□□□□□ -1.21
CPS1-207ENST00000479988 PLEKHG1Q9ULL1 1385 aa7.5□□□□□ -1.21
CPS1-207ENST00000479988 AAMPQ13685 434 aa7.5□□□□□ -1.21
CPS1-207ENST00000479988 AMOTQ4VCS5 1084 aa7.5□□□□□ -1.21
CPS1-207ENST00000479988 ZNF652Q9Y2D9 606 aa7.5□□□□□ -1.21
CPS1-207ENST00000479988 PLA2R1Q13018 1463 aa7.49□□□□□ -1.21
CPS1-207ENST00000479988 SLC4A10Q6U841 1118 aa7.49□□□□□ -1.21
CPS1-207ENST00000479988 RRP7AQ9Y3A4 280 aaKnown RBP7.49□□□□□ -1.21
CPS1-207ENST00000479988 FANCIQ9NVI1 1328 aa7.49□□□□□ -1.21
CPS1-207ENST00000479988 RRS1Q15050 365 aaKnown RBP7.49□□□□□ -1.21
CPS1-207ENST00000479988 UPF2Q9HAU5 1272 aaKnown RBP7.49□□□□□ -1.21
CPS1-207ENST00000479988 ADAMTS8Q9UP79 889 aa7.49□□□□□ -1.21
CPS1-207ENST00000479988 ANKRD24Q8TF21 1146 aa7.49□□□□□ -1.21
CPS1-207ENST00000479988 PIK3R4Q99570 1358 aa7.49□□□□□ -1.21
CPS1-207ENST00000479988 FAM98CQ17RN3 349 aaKnown RBP7.49□□□□□ -1.21
CPS1-207ENST00000479988 NME9Q86XW9 330 aa7.49□□□□□ -1.21
CPS1-207ENST00000479988 FBXW7Q969H0 707 aa7.49□□□□□ -1.21
CPS1-207ENST00000479988 FAM177BA6PVY3 158 aa7.48□□□□□ -1.21
CPS1-207ENST00000479988 VPS37DQ86XT2 251 aa7.48□□□□□ -1.21
CPS1-207ENST00000479988 NINLQ9Y2I6 1382 aa7.48□□□□□ -1.21
CPS1-207ENST00000479988 ABCA9Q8IUA7 1624 aa7.48□□□□□ -1.21
CPS1-207ENST00000479988 SBNO2Q9Y2G9 1366 aa7.48□□□□□ -1.21
CPS1-207ENST00000479988 CCDC146Q8IYE0 955 aa7.48□□□□□ -1.21
CPS1-207ENST00000479988 RUNDC1Q96C34 613 aa7.48□□□□□ -1.21
CPS1-207ENST00000479988 IL2RBP14784 551 aa7.48□□□□□ -1.21
CPS1-207ENST00000479988 NOL10Q9BSC4 688 aaKnown RBP7.48□□□□□ -1.21
CPS1-207ENST00000479988 TFCP2L1Q9NZI6 479 aa7.48□□□□□ -1.21
CPS1-207ENST00000479988 GCP02774 474 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 RIPK4P57078 832 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 APBA3O96018 575 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 HSPA1LP34931 641 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 RIC3Q7Z5B4 369 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 ZCRB1Q8TBF4 217 aaKnown RBP7.47□□□□□ -1.21
CPS1-207ENST00000479988 ERVK-7P63135 1459 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 NSD2O96028 1365 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 APAF1O14727 1248 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 PTCD1O75127 700 aaKnown RBP7.47□□□□□ -1.21
CPS1-207ENST00000479988 IFNL2Q8IZJ0 200 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 TET3O43151 1660 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 JCADQ9P266 1359 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 ASXL1Q8IXJ9 1541 aa7.47□□□□□ -1.21
CPS1-207ENST00000479988 C9orf78Q9NZ63 289 aaPredicted RBP7.47□□□□□ -1.21
CPS1-207ENST00000479988 YTHDC2Q9H6S0 1430 aaKnown RBP7.46□□□□□ -1.21
CPS1-207ENST00000479988 KAT6BQ8WYB5 2073 aa7.46□□□□□ -1.21
CPS1-207ENST00000479988 ELL2O00472 640 aaPredicted RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms