RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 FBLN1P23142 703 aa16.94■□□□□ 0.3
SEC13-216ENST00000479868 C3P01024 1663 aa16.94■□□□□ 0.3
SEC13-216ENST00000479868 ROBO2Q9HCK4 1378 aa16.94■□□□□ 0.3
SEC13-216ENST00000479868 NUDT16Q96DE0 195 aaKnown RBP16.94■□□□□ 0.3
SEC13-216ENST00000479868 EDC4Q6P2E9 1401 aaKnown RBP16.93■□□□□ 0.3
SEC13-216ENST00000479868 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
SEC13-216ENST00000479868 PLEKHG1Q9ULL1 1385 aa16.93■□□□□ 0.3
SEC13-216ENST00000479868 MAP2P11137 1827 aaKnown RBP16.92■□□□□ 0.3
SEC13-216ENST00000479868 CDC42BPGQ6DT37 1551 aa16.92■□□□□ 0.3
SEC13-216ENST00000479868 DIAPH1O60610 1272 aaKnown RBP16.92■□□□□ 0.3
SEC13-216ENST00000479868 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
SEC13-216ENST00000479868 POLKQ9UBT6 870 aa16.91■□□□□ 0.3
SEC13-216ENST00000479868 FER1L4A9Z1Z3 1794 aa16.91■□□□□ 0.3
SEC13-216ENST00000479868 KDM2BQ8NHM5 1336 aa16.91■□□□□ 0.3
SEC13-216ENST00000479868 TCERG1O14776 1098 aaKnown RBP16.91■□□□□ 0.3
SEC13-216ENST00000479868 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
SEC13-216ENST00000479868 MON2Q7Z3U7 1717 aa16.9■□□□□ 0.3
SEC13-216ENST00000479868 SKAP1Q86WV1 359 aa16.9■□□□□ 0.3
SEC13-216ENST00000479868 NME9Q86XW9 330 aa16.9■□□□□ 0.3
SEC13-216ENST00000479868 PRR36Q9H6K5 1346 aa16.9■□□□□ 0.3
SEC13-216ENST00000479868 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.9■□□□□ 0.3
SEC13-216ENST00000479868 TMPOP42166 694 aaKnown RBP16.89■□□□□ 0.3
SEC13-216ENST00000479868 PPM1GO15355 546 aaPredicted RBP16.89■□□□□ 0.29
SEC13-216ENST00000479868 ZRANB1Q9UGI0 708 aa16.89■□□□□ 0.29
SEC13-216ENST00000479868 AKAP12Q02952 1782 aa16.89■□□□□ 0.29
SEC13-216ENST00000479868 RARSP54136 660 aaKnown RBP16.88■□□□□ 0.29
SEC13-216ENST00000479868 SLC26A8Q96RN1 970 aa16.88■□□□□ 0.29
SEC13-216ENST00000479868 MAPK8IP3Q9UPT6 1336 aa16.88■□□□□ 0.29
SEC13-216ENST00000479868 ITSN1Q15811 1721 aa16.88■□□□□ 0.29
SEC13-216ENST00000479868 TRIM35Q9UPQ4 493 aa16.88■□□□□ 0.29
SEC13-216ENST00000479868 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
SEC13-216ENST00000479868 PTPRUQ92729 1446 aa16.87■□□□□ 0.29
SEC13-216ENST00000479868 ANP32EQ9BTT0 268 aa16.87■□□□□ 0.29
SEC13-216ENST00000479868 SLIT1O75093 1534 aa16.86■□□□□ 0.29
SEC13-216ENST00000479868 PDE3AQ14432 1141 aa16.86■□□□□ 0.29
SEC13-216ENST00000479868 EMILIN1Q9Y6C2 1016 aa16.86■□□□□ 0.29
SEC13-216ENST00000479868 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
SEC13-216ENST00000479868 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
SEC13-216ENST00000479868 CENPQQ7L2Z9 268 aaPredicted RBP16.86■□□□□ 0.29
SEC13-216ENST00000479868 EID1Q9Y6B2 187 aa16.86■□□□□ 0.29
SEC13-216ENST00000479868 CANXP27824 592 aaKnown RBP16.85■□□□□ 0.29
SEC13-216ENST00000479868 PANK1Q8TE04 598 aa16.85■□□□□ 0.29
SEC13-216ENST00000479868 FRAT1Q92837 279 aaPredicted RBP16.85■□□□□ 0.29
SEC13-216ENST00000479868 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
SEC13-216ENST00000479868 TSR2Q969E8 191 aaKnown RBP16.85■□□□□ 0.29
SEC13-216ENST00000479868 MS4A1P11836 297 aa16.84■□□□□ 0.29
SEC13-216ENST00000479868 BCL2L13Q9BXK5 485 aa16.84■□□□□ 0.29
SEC13-216ENST00000479868 FCHSD2O94868 740 aa16.84■□□□□ 0.29
SEC13-216ENST00000479868 RIPK4P57078 832 aa16.84■□□□□ 0.29
SEC13-216ENST00000479868 TOPAZ1Q8N9V7 1692 aa16.83■□□□□ 0.29
SEC13-216ENST00000479868 NUTM2FA1L443 756 aa16.83■□□□□ 0.28
SEC13-216ENST00000479868 AATKQ6ZMQ8 1374 aa16.83■□□□□ 0.28
SEC13-216ENST00000479868 PDE4AP27815 886 aa16.82■□□□□ 0.28
SEC13-216ENST00000479868 COG3Q96JB2 828 aa16.82■□□□□ 0.28
SEC13-216ENST00000479868 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
SEC13-216ENST00000479868 RSPH6AQ9H0K4 717 aa16.82■□□□□ 0.28
SEC13-216ENST00000479868 COG6Q9Y2V7 657 aa16.82■□□□□ 0.28
SEC13-216ENST00000479868 PRKAR2BP31323 418 aa16.82■□□□□ 0.28
SEC13-216ENST00000479868 PNNQ9H307 717 aaKnown RBP16.82■□□□□ 0.28
SEC13-216ENST00000479868 CDK12Q9NYV4 1490 aaPredicted RBP16.82■□□□□ 0.28
SEC13-216ENST00000479868 TNNQ9UQP3 1299 aa16.81■□□□□ 0.28
SEC13-216ENST00000479868 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
SEC13-216ENST00000479868 AMOTL2Q9Y2J4 779 aa16.81■□□□□ 0.28
SEC13-216ENST00000479868 NRKQ7Z2Y5 1582 aa16.81■□□□□ 0.28
SEC13-216ENST00000479868 HMOX1P09601 288 aa16.8■□□□□ 0.28
SEC13-216ENST00000479868 IL13P35225 146 aa16.8■□□□□ 0.28
SEC13-216ENST00000479868 BACH2Q9BYV9 841 aa16.8■□□□□ 0.28
SEC13-216ENST00000479868 ACEP12821 1306 aa16.8■□□□□ 0.28
SEC13-216ENST00000479868 RLBP1P12271 317 aa16.8■□□□□ 0.28
SEC13-216ENST00000479868 EXOSC9Q06265 439 aaKnown RBP16.79■□□□□ 0.28
SEC13-216ENST00000479868 THEMISQ8N1K5 641 aaPredicted RBP16.79■□□□□ 0.28
SEC13-216ENST00000479868 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
SEC13-216ENST00000479868 IL16Q14005 1332 aa16.79■□□□□ 0.28
SEC13-216ENST00000479868 CLUAP1Q96AJ1 413 aa16.78■□□□□ 0.28
SEC13-216ENST00000479868 PHACTR3Q96KR7 559 aa16.78■□□□□ 0.28
SEC13-216ENST00000479868 PLEKHG3A1L390 1219 aa16.78■□□□□ 0.28
SEC13-216ENST00000479868 TTC21BQ7Z4L5 1316 aa16.77■□□□□ 0.28
SEC13-216ENST00000479868 IGHDP01880 384 aa16.77■□□□□ 0.28
SEC13-216ENST00000479868 PTCH1Q13635 1447 aa16.77■□□□□ 0.27
SEC13-216ENST00000479868 CT47B1P0C2W7 299 aaPredicted RBP16.77■□□□□ 0.27
SEC13-216ENST00000479868 ANP32AP39687 249 aaKnown RBP16.77■□□□□ 0.27
SEC13-216ENST00000479868 USP6P35125 1406 aa16.76■□□□□ 0.27
SEC13-216ENST00000479868 DIP2AQ14689 1571 aa16.75■□□□□ 0.27
SEC13-216ENST00000479868 NEFMP07197 916 aa16.75■□□□□ 0.27
SEC13-216ENST00000479868 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
SEC13-216ENST00000479868 OVOS2A0A0J9YW53 1432 aa16.74■□□□□ 0.27
SEC13-216ENST00000479868 OVOS2Q6IE36 1432 aa16.74■□□□□ 0.27
SEC13-216ENST00000479868 NFE2L2Q16236 605 aa16.74■□□□□ 0.27
SEC13-216ENST00000479868 SSH1Q8WYL5 1049 aa16.73■□□□□ 0.27
SEC13-216ENST00000479868 SMC4Q9NTJ3 1288 aa16.73■□□□□ 0.27
SEC13-216ENST00000479868 XRN1Q8IZH2 1706 aaKnown RBP16.73■□□□□ 0.27
SEC13-216ENST00000479868 ERICH6Q7L0X2 663 aa16.73■□□□□ 0.27
SEC13-216ENST00000479868 CEP170BQ9Y4F5 1589 aaPredicted RBP16.73■□□□□ 0.27
SEC13-216ENST00000479868 ZKSCAN2Q63HK3 967 aa16.72■□□□□ 0.27
SEC13-216ENST00000479868 IPO9Q96P70 1041 aaKnown RBP16.72■□□□□ 0.27
SEC13-216ENST00000479868 NALCNQ8IZF0 1738 aa16.72■□□□□ 0.27
SEC13-216ENST00000479868 DLG5Q8TDM6 1919 aa16.72■□□□□ 0.27
SEC13-216ENST00000479868 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
SEC13-216ENST00000479868 THUMPD2Q9BTF0 503 aaKnown RBP16.72■□□□□ 0.27
SEC13-216ENST00000479868 SSH2Q76I76 1423 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms