RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 TCERG1O14776 1098 aaKnown RBP14.77□□□□□ -0.04
RAPGEF3-209ENST00000479866 CSB-PGBD3P0DP91 1061 aa14.77□□□□□ -0.05
RAPGEF3-209ENST00000479866 SYNMO15061 1565 aa14.77□□□□□ -0.05
RAPGEF3-209ENST00000479866 ARHGEF40Q8TER5 1519 aa14.76□□□□□ -0.05
RAPGEF3-209ENST00000479866 ZMYM4Q5VZL5 1548 aa14.76□□□□□ -0.05
RAPGEF3-209ENST00000479866 FTSJ3Q8IY81 847 aaKnown RBP14.74□□□□□ -0.05
RAPGEF3-209ENST00000479866 ABCC11Q96J66 1382 aa14.74□□□□□ -0.05
RAPGEF3-209ENST00000479866 ROBO2Q9HCK4 1378 aa14.74□□□□□ -0.05
RAPGEF3-209ENST00000479866 RTF1Q92541 710 aaKnown RBP14.74□□□□□ -0.05
RAPGEF3-209ENST00000479866 PHF8Q9UPP1 1060 aa14.74□□□□□ -0.05
RAPGEF3-209ENST00000479866 AGLP35573 1532 aa14.74□□□□□ -0.05
RAPGEF3-209ENST00000479866 SULT6B1Q6IMI4 303 aa14.74□□□□□ -0.05
RAPGEF3-209ENST00000479866 EXOC6Q8TAG9 804 aa14.74□□□□□ -0.05
RAPGEF3-209ENST00000479866 MROH2AA6NES4 1674 aa14.73□□□□□ -0.05
RAPGEF3-209ENST00000479866 E9PSI1 815 aa14.73□□□□□ -0.05
RAPGEF3-209ENST00000479866 TSR2Q969E8 191 aaKnown RBP14.73□□□□□ -0.05
RAPGEF3-209ENST00000479866 MYH16Q9H6N6 1097 aa14.73□□□□□ -0.05
RAPGEF3-209ENST00000479866 RRP1P56182 461 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-209ENST00000479866 THUMPD2Q9BTF0 503 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-209ENST00000479866 SBNO2Q9Y2G9 1366 aa14.71□□□□□ -0.05
RAPGEF3-209ENST00000479866 PIK3C2BO00750 1634 aa14.71□□□□□ -0.05
RAPGEF3-209ENST00000479866 NEXMIFQ5QGS0 1516 aa14.71□□□□□ -0.06
RAPGEF3-209ENST00000479866 NPM2Q86SE8 214 aaKnown RBP14.71□□□□□ -0.06
RAPGEF3-209ENST00000479866 TTC21BQ7Z4L5 1316 aa14.7□□□□□ -0.06
RAPGEF3-209ENST00000479866 ZC3H6P61129 1189 aaKnown RBP14.7□□□□□ -0.06
RAPGEF3-209ENST00000479866 SMC4Q9NTJ3 1288 aa14.7□□□□□ -0.06
RAPGEF3-209ENST00000479866 PREX1Q8TCU6 1659 aa14.69□□□□□ -0.06
RAPGEF3-209ENST00000479866 ORAI2Q96SN7 254 aa14.69□□□□□ -0.06
RAPGEF3-209ENST00000479866 POLKQ9UBT6 870 aa14.69□□□□□ -0.06
RAPGEF3-209ENST00000479866 KIF13AQ9H1H9 1805 aa14.69□□□□□ -0.06
RAPGEF3-209ENST00000479866 HSP90AA2PQ14568 343 aaPredicted RBP14.69□□□□□ -0.06
RAPGEF3-209ENST00000479866 HSP90AB2PQ58FF8 381 aa14.69□□□□□ -0.06
RAPGEF3-209ENST00000479866 AAMPQ13685 434 aa14.69□□□□□ -0.06
RAPGEF3-209ENST00000479866 WWC1Q8IX03 1113 aa14.68□□□□□ -0.06
RAPGEF3-209ENST00000479866 CRBNQ96SW2 442 aa14.68□□□□□ -0.06
RAPGEF3-209ENST00000479866 PRR36Q9H6K5 1346 aa14.68□□□□□ -0.06
RAPGEF3-209ENST00000479866 PLEKHG1Q9ULL1 1385 aa14.68□□□□□ -0.06
RAPGEF3-209ENST00000479866 ALKQ9UM73 1620 aa14.68□□□□□ -0.06
RAPGEF3-209ENST00000479866 ZFYVE9O95405 1425 aa14.68□□□□□ -0.06
RAPGEF3-209ENST00000479866 PUS7Q96PZ0 661 aaKnown RBP14.68□□□□□ -0.06
RAPGEF3-209ENST00000479866 BCAR3O75815 825 aa14.68□□□□□ -0.06
RAPGEF3-209ENST00000479866 DCTN1Q14203 1278 aa14.68□□□□□ -0.06
RAPGEF3-209ENST00000479866 MSH5O43196 834 aa14.67□□□□□ -0.06
RAPGEF3-209ENST00000479866 USHBP1Q8N6Y0 703 aa14.67□□□□□ -0.06
RAPGEF3-209ENST00000479866 NLRP1Q9C000 1473 aa14.67□□□□□ -0.06
RAPGEF3-209ENST00000479866 RGS3P49796 1198 aa14.67□□□□□ -0.06
RAPGEF3-209ENST00000479866 KDM5AP29375 1690 aaKnown RBP14.67□□□□□ -0.06
RAPGEF3-209ENST00000479866 DDX17Q92841 729 aaKnown RBP14.66□□□□□ -0.06
RAPGEF3-209ENST00000479866 NINLQ9Y2I6 1382 aa14.66□□□□□ -0.06
RAPGEF3-209ENST00000479866 TMPOP42166 694 aaKnown RBP14.66□□□□□ -0.06
RAPGEF3-209ENST00000479866 COG6Q9Y2V7 657 aa14.65□□□□□ -0.06
RAPGEF3-209ENST00000479866 SIGLEC1Q9BZZ2 1709 aa14.65□□□□□ -0.06
RAPGEF3-209ENST00000479866 NECTIN2Q92692 538 aa14.65□□□□□ -0.06
RAPGEF3-209ENST00000479866 ARXQ96QS3 562 aa14.65□□□□□ -0.06
RAPGEF3-209ENST00000479866 RSPH6AQ9H0K4 717 aa14.64□□□□□ -0.07
RAPGEF3-209ENST00000479866 EXOSC9Q06265 439 aaKnown RBP14.64□□□□□ -0.07
RAPGEF3-209ENST00000479866 AEBP1Q8IUX7 1158 aa14.64□□□□□ -0.07
RAPGEF3-209ENST00000479866 ZBTB47Q9UFB7 747 aaPredicted RBP14.64□□□□□ -0.07
RAPGEF3-209ENST00000479866 NLRP2Q9NX02 1062 aa14.63□□□□□ -0.07
RAPGEF3-209ENST00000479866 ZC3H13Q5T200 1668 aaKnown RBP14.63□□□□□ -0.07
RAPGEF3-209ENST00000479866 NSD2O96028 1365 aa14.63□□□□□ -0.07
RAPGEF3-209ENST00000479866 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
RAPGEF3-209ENST00000479866 USP35Q9P2H5 1018 aa14.63□□□□□ -0.07
RAPGEF3-209ENST00000479866 SMG6Q86US8 1419 aaKnown RBP14.63□□□□□ -0.07
RAPGEF3-209ENST00000479866 SLFN5Q08AF3 891 aa14.62□□□□□ -0.07
RAPGEF3-209ENST00000479866 KRT28Q7Z3Y7 464 aa14.62□□□□□ -0.07
RAPGEF3-209ENST00000479866 PANK1Q8TE04 598 aa14.62□□□□□ -0.07
RAPGEF3-209ENST00000479866 DMRT2Q9Y5R5 561 aa14.62□□□□□ -0.07
RAPGEF3-209ENST00000479866 ITPRIPQ8IWB1 547 aa14.62□□□□□ -0.07
RAPGEF3-209ENST00000479866 CHMP4AQ9BY43 222 aa14.62□□□□□ -0.07
RAPGEF3-209ENST00000479866 TMEM131LA2VDJ0 1609 aa14.61□□□□□ -0.07
RAPGEF3-209ENST00000479866 FAM83GA6ND36 823 aa14.61□□□□□ -0.07
RAPGEF3-209ENST00000479866 FCHSD2O94868 740 aa14.61□□□□□ -0.07
RAPGEF3-209ENST00000479866 CABLES1Q8TDN4 633 aa14.61□□□□□ -0.07
RAPGEF3-209ENST00000479866 NRXN1Q9ULB1 1477 aa14.61□□□□□ -0.07
RAPGEF3-209ENST00000479866 CALD1Q05682 793 aaKnown RBP14.61□□□□□ -0.07
RAPGEF3-209ENST00000479866 ADGRB1O14514 1584 aa14.61□□□□□ -0.07
RAPGEF3-209ENST00000479866 LMOD3Q0VAK6 560 aa14.6□□□□□ -0.07
RAPGEF3-209ENST00000479866 C20orf194Q5TEA3 1177 aa14.6□□□□□ -0.07
RAPGEF3-209ENST00000479866 DUSP27Q5VZP5 1158 aa14.6□□□□□ -0.07
RAPGEF3-209ENST00000479866 MIS18AQ9NYP9 233 aa14.6□□□□□ -0.07
RAPGEF3-209ENST00000479866 NPC1L1Q9UHC9 1359 aa14.6□□□□□ -0.07
RAPGEF3-209ENST00000479866 MCM10Q7L590 875 aa14.6□□□□□ -0.07
RAPGEF3-209ENST00000479866 SPATA31D1Q6ZQQ2 1576 aa14.6□□□□□ -0.07
RAPGEF3-209ENST00000479866 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
RAPGEF3-209ENST00000479866 PHACTR3Q96KR7 559 aa14.6□□□□□ -0.07
RAPGEF3-209ENST00000479866 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
RAPGEF3-209ENST00000479866 C19orf44Q9H6X5 657 aa14.59□□□□□ -0.07
RAPGEF3-209ENST00000479866 MYO5BQ9ULV0 1848 aa14.59□□□□□ -0.07
RAPGEF3-209ENST00000479866 BBXQ8WY36 941 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF3-209ENST00000479866 SIRT1Q96EB6 747 aa14.58□□□□□ -0.08
RAPGEF3-209ENST00000479866 PTPRMP28827 1452 aa14.58□□□□□ -0.08
RAPGEF3-209ENST00000479866 TULP4Q9NRJ4 1543 aa14.58□□□□□ -0.08
RAPGEF3-209ENST00000479866 PPLO60437 1756 aa14.58□□□□□ -0.08
RAPGEF3-209ENST00000479866 QRICH2Q9H0J4 1663 aa14.58□□□□□ -0.08
RAPGEF3-209ENST00000479866 MAP3K19Q56UN5 1328 aa14.58□□□□□ -0.08
RAPGEF3-209ENST00000479866 EIF4A2Q14240 407 aaKnown RBP14.58□□□□□ -0.08
RAPGEF3-209ENST00000479866 CHRNA2Q15822 529 aa14.58□□□□□ -0.08
RAPGEF3-209ENST00000479866 NOP58Q9Y2X3 529 aaKnown RBP14.58□□□□□ -0.08
RAPGEF3-209ENST00000479866 ADAMTS13Q76LX8 1427 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms