RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CCDC30Q5VVM6 783 aa17.55■□□□□ 0.4
COL20A1-206ENST00000479501 WDR7Q9Y4E6 1490 aa17.55■□□□□ 0.4
COL20A1-206ENST00000479501 GPRASP1Q5JY77 1395 aa17.55■□□□□ 0.4
COL20A1-206ENST00000479501 ANO2Q9NQ90 1003 aa17.55■□□□□ 0.4
COL20A1-206ENST00000479501 PER1O15534 1290 aaPredicted RBP17.55■□□□□ 0.4
COL20A1-206ENST00000479501 GNAI3P08754 354 aa17.55■□□□□ 0.4
COL20A1-206ENST00000479501 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
COL20A1-206ENST00000479501 A2MP01023 1474 aa17.54■□□□□ 0.4
COL20A1-206ENST00000479501 SLC4A2P04920 1241 aa17.54■□□□□ 0.4
COL20A1-206ENST00000479501 UBTFL1P0CB47 393 aaPredicted RBP17.54■□□□□ 0.4
COL20A1-206ENST00000479501 SKOR2Q2VWA4 1001 aaPredicted RBP17.53■□□□□ 0.4
COL20A1-206ENST00000479501 SKAP1Q86WV1 359 aa17.53■□□□□ 0.4
COL20A1-206ENST00000479501 THUMPD2Q9BTF0 503 aaKnown RBP17.53■□□□□ 0.4
COL20A1-206ENST00000479501 UHRF1BP1Q6BDS2 1440 aa17.53■□□□□ 0.4
COL20A1-206ENST00000479501 RUFY2Q8WXA3 655 aa17.53■□□□□ 0.4
COL20A1-206ENST00000479501 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
COL20A1-206ENST00000479501 NLRP2Q9NX02 1062 aa17.53■□□□□ 0.4
COL20A1-206ENST00000479501 IFIT2P09913 472 aaKnown RBP17.53■□□□□ 0.4
COL20A1-206ENST00000479501 ATF3P18847 181 aa17.52■□□□□ 0.4
COL20A1-206ENST00000479501 HSP90AB4PQ58FF6 505 aa17.52■□□□□ 0.4
COL20A1-206ENST00000479501 HTATSF1O43719 755 aaKnown RBP17.52■□□□□ 0.4
COL20A1-206ENST00000479501 NME9Q86XW9 330 aa17.52■□□□□ 0.4
COL20A1-206ENST00000479501 HSP90B1P14625 803 aaKnown RBP17.51■□□□□ 0.39
COL20A1-206ENST00000479501 TMEM57Q8N5G2 664 aa17.51■□□□□ 0.39
COL20A1-206ENST00000479501 NSD2O96028 1365 aa17.51■□□□□ 0.39
COL20A1-206ENST00000479501 LRPPRCP42704 1394 aaKnown RBP17.51■□□□□ 0.39
COL20A1-206ENST00000479501 ABCC11Q96J66 1382 aa17.51■□□□□ 0.39
COL20A1-206ENST00000479501 ANO8Q9HCE9 1232 aaPredicted RBP17.51■□□□□ 0.39
COL20A1-206ENST00000479501 WASLO00401 505 aaPredicted RBP17.51■□□□□ 0.39
COL20A1-206ENST00000479501 EVA1CP58658 441 aa17.51■□□□□ 0.39
COL20A1-206ENST00000479501 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
COL20A1-206ENST00000479501 ABCC2Q92887 1545 aa17.51■□□□□ 0.39
COL20A1-206ENST00000479501 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
COL20A1-206ENST00000479501 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
COL20A1-206ENST00000479501 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
COL20A1-206ENST00000479501 GNL2Q13823 731 aaKnown RBP17.5■□□□□ 0.39
COL20A1-206ENST00000479501 CCDC9Q9Y3X0 531 aaKnown RBP17.5■□□□□ 0.39
COL20A1-206ENST00000479501 ASXL1Q8IXJ9 1541 aa17.49■□□□□ 0.39
COL20A1-206ENST00000479501 CSPP1Q1MSJ5 1256 aa17.49■□□□□ 0.39
COL20A1-206ENST00000479501 PLEKHO1Q53GL0 409 aaPredicted RBP17.49■□□□□ 0.39
COL20A1-206ENST00000479501 POGZQ7Z3K3 1410 aa17.48■□□□□ 0.39
COL20A1-206ENST00000479501 MSH5O43196 834 aa17.48■□□□□ 0.39
COL20A1-206ENST00000479501 CEP170Q5SW79 1584 aa17.48■□□□□ 0.39
COL20A1-206ENST00000479501 ZKSCAN1P17029 563 aaPredicted RBP17.48■□□□□ 0.39
COL20A1-206ENST00000479501 PROSER2Q86WR7 435 aaPredicted RBP17.48■□□□□ 0.39
COL20A1-206ENST00000479501 AIMP1Q12904 312 aaKnown RBP17.48■□□□□ 0.39
COL20A1-206ENST00000479501 FOXD4L6Q3SYB3 417 aaPredicted RBP17.48■□□□□ 0.39
COL20A1-206ENST00000479501 HDGFL1Q5TGJ6 251 aa17.48■□□□□ 0.39
COL20A1-206ENST00000479501 FOXD4L3Q6VB84 417 aaPredicted RBP17.48■□□□□ 0.39
COL20A1-206ENST00000479501 CHD1LQ86WJ1 897 aa17.48■□□□□ 0.39
COL20A1-206ENST00000479501 IL27Q8NEV9 243 aa17.48■□□□□ 0.39
COL20A1-206ENST00000479501 GNAI2P04899 355 aa17.47■□□□□ 0.39
COL20A1-206ENST00000479501 SURF6O75683 361 aaKnown RBP17.47■□□□□ 0.39
COL20A1-206ENST00000479501 TNNT3P45378 269 aaPredicted RBP17.47■□□□□ 0.39
COL20A1-206ENST00000479501 ANKLE2Q86XL3 938 aa17.46■□□□□ 0.39
COL20A1-206ENST00000479501 RIC3Q7Z5B4 369 aa17.46■□□□□ 0.39
COL20A1-206ENST00000479501 CCT4P50991 539 aaKnown RBP17.46■□□□□ 0.39
COL20A1-206ENST00000479501 NUCB2P80303 420 aa17.46■□□□□ 0.39
COL20A1-206ENST00000479501 ABCC10Q5T3U5 1492 aa17.46■□□□□ 0.38
COL20A1-206ENST00000479501 FRAT2O75474 233 aaPredicted RBP17.46■□□□□ 0.38
COL20A1-206ENST00000479501 ALDH1L2Q3SY69 923 aa17.45■□□□□ 0.38
COL20A1-206ENST00000479501 ATP6V1DQ9Y5K8 247 aa17.45■□□□□ 0.38
COL20A1-206ENST00000479501 EIF2AK4Q9P2K8 1649 aaKnown RBP17.45■□□□□ 0.38
COL20A1-206ENST00000479501 ERC2O15083 957 aa17.45■□□□□ 0.38
COL20A1-206ENST00000479501 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
COL20A1-206ENST00000479501 IFT57Q9NWB7 429 aa17.44■□□□□ 0.38
COL20A1-206ENST00000479501 GCC2Q8IWJ2 1684 aa17.44■□□□□ 0.38
COL20A1-206ENST00000479501 PHF14O94880 888 aa17.44■□□□□ 0.38
COL20A1-206ENST00000479501 BRPF3Q9ULD4 1205 aa17.44■□□□□ 0.38
COL20A1-206ENST00000479501 CARD14Q9BXL6 1004 aa17.44■□□□□ 0.38
COL20A1-206ENST00000479501 KIF3AQ9Y496 699 aa17.44■□□□□ 0.38
COL20A1-206ENST00000479501 FYB1O15117 783 aa17.44■□□□□ 0.38
COL20A1-206ENST00000479501 ANKRD36BQ8N2N9 1353 aa17.43■□□□□ 0.38
COL20A1-206ENST00000479501 CLASRPQ8N2M8 674 aaKnown RBP17.43■□□□□ 0.38
COL20A1-206ENST00000479501 ZNF530Q6P9A1 599 aaPredicted RBP17.42■□□□□ 0.38
COL20A1-206ENST00000479501 MCM10Q7L590 875 aa17.42■□□□□ 0.38
COL20A1-206ENST00000479501 COL17A1Q9UMD9 1497 aaPredicted RBP17.42■□□□□ 0.38
COL20A1-206ENST00000479501 TRIM27P14373 513 aa17.42■□□□□ 0.38
COL20A1-206ENST00000479501 FAM13BQ9NYF5 915 aa17.42■□□□□ 0.38
COL20A1-206ENST00000479501 SPATA31E1Q6ZUB1 1445 aa17.41■□□□□ 0.38
COL20A1-206ENST00000479501 RPAP2Q8IXW5 612 aaPredicted RBP17.41■□□□□ 0.38
COL20A1-206ENST00000479501 FAM43AQ8N2R8 423 aa17.41■□□□□ 0.38
COL20A1-206ENST00000479501 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
COL20A1-206ENST00000479501 CEBPAP49715 358 aaPredicted RBP17.41■□□□□ 0.38
COL20A1-206ENST00000479501 PUS7Q96PZ0 661 aaKnown RBP17.4■□□□□ 0.38
COL20A1-206ENST00000479501 POLR3AO14802 1390 aaPredicted RBP17.4■□□□□ 0.38
COL20A1-206ENST00000479501 RNF20Q5VTR2 975 aa17.4■□□□□ 0.38
COL20A1-206ENST00000479501 MIS18AQ9NYP9 233 aa17.39■□□□□ 0.37
COL20A1-206ENST00000479501 FBLN1P23142 703 aa17.39■□□□□ 0.37
COL20A1-206ENST00000479501 RABEP1Q15276 862 aa17.39■□□□□ 0.37
COL20A1-206ENST00000479501 SRCIN1Q9C0H9 1055 aa17.39■□□□□ 0.37
COL20A1-206ENST00000479501 GTF2E1P29083 439 aaPredicted RBP17.39■□□□□ 0.37
COL20A1-206ENST00000479501 PIK3C2GO75747 1445 aa17.38■□□□□ 0.37
COL20A1-206ENST00000479501 FAM184AQ8NB25 1140 aa17.38■□□□□ 0.37
COL20A1-206ENST00000479501 LRRFIP1Q32MZ4 808 aaKnown RBP17.38■□□□□ 0.37
COL20A1-206ENST00000479501 PLEKHH1Q9ULM0 1364 aa17.38■□□□□ 0.37
COL20A1-206ENST00000479501 H3BQV1 296 aa17.38■□□□□ 0.37
COL20A1-206ENST00000479501 NEK4P51957 841 aa17.38■□□□□ 0.37
COL20A1-206ENST00000479501 IFFO2Q5TF58 517 aa17.38■□□□□ 0.37
COL20A1-206ENST00000479501 MBD5Q9P267 1494 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms