RNA–Protein interactions for RNA: ENST00000479412.2

NOTCH2-203, Transcript of notch 2, humanhuman

TSL 1 (best)

Gene NOTCH2, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-203ENST00000479412 RRS1Q15050 365 aaKnown RBP17.61■□□□□ 0.41
NOTCH2-203ENST00000479412 TCP11L2Q8N4U5 519 aa17.61■□□□□ 0.41
NOTCH2-203ENST00000479412 HMOX1P09601 288 aa17.6■□□□□ 0.41
NOTCH2-203ENST00000479412 NUTM2GQ5VZR2 741 aa17.6■□□□□ 0.41
NOTCH2-203ENST00000479412 ZMYM4Q5VZL5 1548 aa17.6■□□□□ 0.41
NOTCH2-203ENST00000479412 BCAR3O75815 825 aa17.6■□□□□ 0.41
NOTCH2-203ENST00000479412 TMEM131LA2VDJ0 1609 aa17.6■□□□□ 0.41
NOTCH2-203ENST00000479412 CLCN1P35523 988 aa17.59■□□□□ 0.41
NOTCH2-203ENST00000479412 CFAP53Q96M91 514 aa17.59■□□□□ 0.41
NOTCH2-203ENST00000479412 EMILIN1Q9Y6C2 1016 aa17.58■□□□□ 0.4
NOTCH2-203ENST00000479412 C14orf37Q86TY3 774 aa17.57■□□□□ 0.4
NOTCH2-203ENST00000479412 NUDT16Q96DE0 195 aaKnown RBP17.57■□□□□ 0.4
NOTCH2-203ENST00000479412 DUSP27Q5VZP5 1158 aa17.57■□□□□ 0.4
NOTCH2-203ENST00000479412 EID1Q9Y6B2 187 aa17.57■□□□□ 0.4
NOTCH2-203ENST00000479412 ALKQ9UM73 1620 aa17.56■□□□□ 0.4
NOTCH2-203ENST00000479412 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
NOTCH2-203ENST00000479412 SBNO2Q9Y2G9 1366 aa17.56■□□□□ 0.4
NOTCH2-203ENST00000479412 CANXP27824 592 aaKnown RBP17.56■□□□□ 0.4
NOTCH2-203ENST00000479412 TRIM44Q96DX7 344 aaPredicted RBP17.56■□□□□ 0.4
NOTCH2-203ENST00000479412 WASLO00401 505 aaPredicted RBP17.55■□□□□ 0.4
NOTCH2-203ENST00000479412 SEC24BO95487 1268 aa17.55■□□□□ 0.4
NOTCH2-203ENST00000479412 TSR2Q969E8 191 aaKnown RBP17.55■□□□□ 0.4
NOTCH2-203ENST00000479412 CLUAP1Q96AJ1 413 aa17.55■□□□□ 0.4
NOTCH2-203ENST00000479412 BECN1Q14457 450 aa17.55■□□□□ 0.4
NOTCH2-203ENST00000479412 ZBTB7CA1YPR0 619 aa17.54■□□□□ 0.4
NOTCH2-203ENST00000479412 PTPRMP28827 1452 aa17.54■□□□□ 0.4
NOTCH2-203ENST00000479412 MYH16Q9H6N6 1097 aa17.54■□□□□ 0.4
NOTCH2-203ENST00000479412 KIAA1210Q9ULL0 1709 aa17.54■□□□□ 0.4
NOTCH2-203ENST00000479412 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.54■□□□□ 0.4
NOTCH2-203ENST00000479412 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
NOTCH2-203ENST00000479412 AMOTL2Q9Y2J4 779 aa17.53■□□□□ 0.4
NOTCH2-203ENST00000479412 ARHGEF40Q8TER5 1519 aa17.53■□□□□ 0.4
NOTCH2-203ENST00000479412 WWC1Q8IX03 1113 aa17.53■□□□□ 0.4
NOTCH2-203ENST00000479412 CENPQQ7L2Z9 268 aaPredicted RBP17.53■□□□□ 0.4
NOTCH2-203ENST00000479412 THUMPD2Q9BTF0 503 aaKnown RBP17.53■□□□□ 0.4
NOTCH2-203ENST00000479412 BLMP54132 1417 aaPredicted RBP17.52■□□□□ 0.4
NOTCH2-203ENST00000479412 HDGFP51858 240 aaKnown RBP17.52■□□□□ 0.4
NOTCH2-203ENST00000479412 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
NOTCH2-203ENST00000479412 SETBP1Q9Y6X0 1596 aa17.52■□□□□ 0.4
NOTCH2-203ENST00000479412 ROBO2Q9HCK4 1378 aa17.52■□□□□ 0.39
NOTCH2-203ENST00000479412 ESPNB1AK53 854 aa17.51■□□□□ 0.39
NOTCH2-203ENST00000479412 TMEM2Q9UHN6 1383 aa17.51■□□□□ 0.39
NOTCH2-203ENST00000479412 ARHGEF28Q8N1W1 1705 aaKnown RBP17.51■□□□□ 0.39
NOTCH2-203ENST00000479412 ZC3H13Q5T200 1668 aaKnown RBP17.5■□□□□ 0.39
NOTCH2-203ENST00000479412 TNNQ9UQP3 1299 aa17.5■□□□□ 0.39
NOTCH2-203ENST00000479412 SLFN5Q08AF3 891 aa17.5■□□□□ 0.39
NOTCH2-203ENST00000479412 ATAD2Q6PL18 1390 aa17.5■□□□□ 0.39
NOTCH2-203ENST00000479412 FAM13BQ9NYF5 915 aa17.49■□□□□ 0.39
NOTCH2-203ENST00000479412 PRR36Q9H6K5 1346 aa17.49■□□□□ 0.39
NOTCH2-203ENST00000479412 ELL2O00472 640 aaPredicted RBP17.49■□□□□ 0.39
NOTCH2-203ENST00000479412 RUNDC1Q96C34 613 aa17.49■□□□□ 0.39
NOTCH2-203ENST00000479412 MAPK8IP3Q9UPT6 1336 aa17.48■□□□□ 0.39
NOTCH2-203ENST00000479412 CCDC61Q9Y6R9 512 aa17.48■□□□□ 0.39
NOTCH2-203ENST00000479412 ERBB4Q15303 1308 aa17.48■□□□□ 0.39
NOTCH2-203ENST00000479412 AGLP35573 1532 aa17.48■□□□□ 0.39
NOTCH2-203ENST00000479412 PPIP5K1Q6PFW1 1433 aa17.47■□□□□ 0.39
NOTCH2-203ENST00000479412 PANK1Q8TE04 598 aa17.47■□□□□ 0.39
NOTCH2-203ENST00000479412 NEURL4Q96JN8 1562 aa17.47■□□□□ 0.39
NOTCH2-203ENST00000479412 DIAPH1O60610 1272 aaKnown RBP17.47■□□□□ 0.39
NOTCH2-203ENST00000479412 KCNA6P17658 529 aa17.47■□□□□ 0.39
NOTCH2-203ENST00000479412 XPCQ01831 940 aaPredicted RBP17.47■□□□□ 0.39
NOTCH2-203ENST00000479412 ZFYVE9O95405 1425 aa17.46■□□□□ 0.39
NOTCH2-203ENST00000479412 NGDNQ8NEJ9 315 aaKnown RBP17.46■□□□□ 0.39
NOTCH2-203ENST00000479412 NPC1L1Q9UHC9 1359 aa17.46■□□□□ 0.39
NOTCH2-203ENST00000479412 PRKAR2BP31323 418 aa17.45■□□□□ 0.38
NOTCH2-203ENST00000479412 LMOD2Q6P5Q4 547 aa17.45■□□□□ 0.38
NOTCH2-203ENST00000479412 KIAA1211Q6ZU35 1233 aa17.45■□□□□ 0.38
NOTCH2-203ENST00000479412 POLKQ9UBT6 870 aa17.45■□□□□ 0.38
NOTCH2-203ENST00000479412 COG6Q9Y2V7 657 aa17.45■□□□□ 0.38
NOTCH2-203ENST00000479412 TRAK2O60296 914 aa17.44■□□□□ 0.38
NOTCH2-203ENST00000479412 RIPK4P57078 832 aa17.44■□□□□ 0.38
NOTCH2-203ENST00000479412 COG3Q96JB2 828 aa17.44■□□□□ 0.38
NOTCH2-203ENST00000479412 SPATA31D1Q6ZQQ2 1576 aa17.44■□□□□ 0.38
NOTCH2-203ENST00000479412 PDCL3Q9H2J4 239 aa17.44■□□□□ 0.38
NOTCH2-203ENST00000479412 PRDM10Q9NQV6 1147 aa17.44■□□□□ 0.38
NOTCH2-203ENST00000479412 ABCC11Q96J66 1382 aa17.44■□□□□ 0.38
NOTCH2-203ENST00000479412 ACEP12821 1306 aa17.44■□□□□ 0.38
NOTCH2-203ENST00000479412 POLR3AO14802 1390 aaPredicted RBP17.43■□□□□ 0.38
NOTCH2-203ENST00000479412 KDM2BQ8NHM5 1336 aa17.43■□□□□ 0.38
NOTCH2-203ENST00000479412 ZNF521Q96K83 1311 aa17.43■□□□□ 0.38
NOTCH2-203ENST00000479412 THEMISQ8N1K5 641 aaPredicted RBP17.43■□□□□ 0.38
NOTCH2-203ENST00000479412 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
NOTCH2-203ENST00000479412 DCTN1Q14203 1278 aa17.43■□□□□ 0.38
NOTCH2-203ENST00000479412 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
NOTCH2-203ENST00000479412 ZHX1Q9UKY1 873 aaPredicted RBP17.43■□□□□ 0.38
NOTCH2-203ENST00000479412 E9PSI1 815 aa17.42■□□□□ 0.38
NOTCH2-203ENST00000479412 MCM4P33991 863 aa17.42■□□□□ 0.38
NOTCH2-203ENST00000479412 AAMPQ13685 434 aa17.41■□□□□ 0.38
NOTCH2-203ENST00000479412 CD163L1Q9NR16 1453 aa17.41■□□□□ 0.38
NOTCH2-203ENST00000479412 GRPEL1Q9HAV7 217 aa17.41■□□□□ 0.38
NOTCH2-203ENST00000479412 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
NOTCH2-203ENST00000479412 FAM83GA6ND36 823 aa17.4■□□□□ 0.38
NOTCH2-203ENST00000479412 AEBP1Q8IUX7 1158 aa17.4■□□□□ 0.38
NOTCH2-203ENST00000479412 MRE11P49959 708 aa17.4■□□□□ 0.38
NOTCH2-203ENST00000479412 UPF2Q9HAU5 1272 aaKnown RBP17.4■□□□□ 0.38
NOTCH2-203ENST00000479412 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
NOTCH2-203ENST00000479412 TBC1D2Q9BYX2 928 aa17.38■□□□□ 0.37
NOTCH2-203ENST00000479412 HSP90AB2PQ58FF8 381 aa17.38■□□□□ 0.37
NOTCH2-203ENST00000479412 EXOSC9Q06265 439 aaKnown RBP17.38■□□□□ 0.37
NOTCH2-203ENST00000479412 USP19O94966 1318 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms