RNA–Protein interactions for RNA: ENST00000479256.1

RTKN-208, Transcript of rhotekin, humanhuman

TSL 5

Gene RTKN, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-208ENST00000479256 TMC1Q8TDI8 760 aa22.46■■□□□ 1.19
RTKN-208ENST00000479256 TESK2Q96S53 571 aa22.46■■□□□ 1.19
RTKN-208ENST00000479256 USP47Q96K76 1375 aa22.45■■□□□ 1.18
RTKN-208ENST00000479256 RXRBP28702 533 aa22.44■■□□□ 1.18
RTKN-208ENST00000479256 FNBP4Q8N3X1 1017 aaPredicted RBP22.44■■□□□ 1.18
RTKN-208ENST00000479256 ABTB2Q8N961 1025 aa22.44■■□□□ 1.18
RTKN-208ENST00000479256 FAM83GA6ND36 823 aa22.43■■□□□ 1.18
RTKN-208ENST00000479256 SLC12A5Q9H2X9 1139 aa22.43■■□□□ 1.18
RTKN-208ENST00000479256 SBNO2Q9Y2G9 1366 aa22.41■■□□□ 1.18
RTKN-208ENST00000479256 ALS2Q96Q42 1657 aa22.41■■□□□ 1.18
RTKN-208ENST00000479256 ATAD2Q6PL18 1390 aa22.4■■□□□ 1.18
RTKN-208ENST00000479256 ZC3H6P61129 1189 aaKnown RBP22.39■■□□□ 1.17
RTKN-208ENST00000479256 BCL9LQ86UU0 1499 aa22.39■■□□□ 1.17
RTKN-208ENST00000479256 USP6P35125 1406 aa22.39■■□□□ 1.17
RTKN-208ENST00000479256 CHRNA2Q15822 529 aa22.38■■□□□ 1.17
RTKN-208ENST00000479256 TRPC5Q9UL62 973 aaPredicted RBP22.37■■□□□ 1.17
RTKN-208ENST00000479256 ZBTB7CA1YPR0 619 aa22.36■■□□□ 1.17
RTKN-208ENST00000479256 NLRP6P59044 892 aa22.36■■□□□ 1.17
RTKN-208ENST00000479256 RBM6P78332 1123 aaKnown RBP22.36■■□□□ 1.17
RTKN-208ENST00000479256 UNC5CLQ8IV45 518 aa22.36■■□□□ 1.17
RTKN-208ENST00000479256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.36■■□□□ 1.17
RTKN-208ENST00000479256 ZRANB1Q9UGI0 708 aa22.36■■□□□ 1.17
RTKN-208ENST00000479256 TTC21BQ7Z4L5 1316 aa22.35■■□□□ 1.17
RTKN-208ENST00000479256 ABCA3Q99758 1704 aa22.35■■□□□ 1.17
RTKN-208ENST00000479256 PRDM11Q9NQV5 511 aa22.35■■□□□ 1.17
RTKN-208ENST00000479256 KTN1Q86UP2 1357 aaKnown RBP22.35■■□□□ 1.17
RTKN-208ENST00000479256 ATRNO75882 1429 aa22.34■■□□□ 1.17
RTKN-208ENST00000479256 SOX12O15370 315 aa22.34■■□□□ 1.17
RTKN-208ENST00000479256 BTG4Q9NY30 223 aa22.34■■□□□ 1.17
RTKN-208ENST00000479256 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
RTKN-208ENST00000479256 SLIT2O94813 1529 aa22.34■■□□□ 1.17
RTKN-208ENST00000479256 KIAA0232Q92628 1395 aa22.34■■□□□ 1.17
RTKN-208ENST00000479256 NLRP13Q86W25 1043 aa22.33■■□□□ 1.17
RTKN-208ENST00000479256 ZNF692Q9BU19 519 aaPredicted RBP22.33■■□□□ 1.17
RTKN-208ENST00000479256 MARF1Q9Y4F3 1742 aaKnown RBP22.33■■□□□ 1.17
RTKN-208ENST00000479256 CPSF1Q10570 1443 aaKnown RBP22.32■■□□□ 1.16
RTKN-208ENST00000479256 SSH2Q76I76 1423 aa22.32■■□□□ 1.16
RTKN-208ENST00000479256 TMF1P82094 1093 aa22.32■■□□□ 1.16
RTKN-208ENST00000479256 CD163L1Q9NR16 1453 aa22.31■■□□□ 1.16
RTKN-208ENST00000479256 GJD4Q96KN9 370 aaPredicted RBP22.31■■□□□ 1.16
RTKN-208ENST00000479256 GCP02774 474 aa22.3■■□□□ 1.16
RTKN-208ENST00000479256 HSPA5P11021 654 aaKnown RBP22.3■■□□□ 1.16
RTKN-208ENST00000479256 NME9Q86XW9 330 aa22.3■■□□□ 1.16
RTKN-208ENST00000479256 POLR3GLQ9BT43 218 aa22.3■■□□□ 1.16
RTKN-208ENST00000479256 RGS12O14924 1447 aa22.3■■□□□ 1.16
RTKN-208ENST00000479256 HDGFL2Q7Z4V5 671 aaPredicted RBP22.29■■□□□ 1.16
RTKN-208ENST00000479256 USP19O94966 1318 aa22.29■■□□□ 1.16
RTKN-208ENST00000479256 STRN4Q9NRL3 753 aa22.28■■□□□ 1.16
RTKN-208ENST00000479256 CRYBG1Q9Y4K1 1723 aa22.28■■□□□ 1.16
RTKN-208ENST00000479256 A0A1W2PP64 1363 aa22.27■■□□□ 1.16
RTKN-208ENST00000479256 PUS7Q96PZ0 661 aaKnown RBP22.26■■□□□ 1.15
RTKN-208ENST00000479256 TERF2IPQ9NYB0 399 aa22.26■■□□□ 1.15
RTKN-208ENST00000479256 PHRF1Q9P1Y6 1649 aaKnown RBP22.26■■□□□ 1.15
RTKN-208ENST00000479256 BRD4O60885 1362 aaPredicted RBP22.25■■□□□ 1.15
RTKN-208ENST00000479256 EIF4G2P78344 907 aaKnown RBP eCLIP22.25■■□□□ 1.15
RTKN-208ENST00000479256 VPS72Q15906 364 aa22.25■■□□□ 1.15
RTKN-208ENST00000479256 PLCH1Q4KWH8 1693 aa22.25■■□□□ 1.15
RTKN-208ENST00000479256 AKAP12Q02952 1782 aa22.24■■□□□ 1.15
RTKN-208ENST00000479256 TTC21AQ8NDW8 1320 aa22.24■■□□□ 1.15
RTKN-208ENST00000479256 PIK3C2AO00443 1686 aa22.23■■□□□ 1.15
RTKN-208ENST00000479256 NRKQ7Z2Y5 1582 aa22.23■■□□□ 1.15
RTKN-208ENST00000479256 SLC24A1O60721 1099 aa22.21■■□□□ 1.15
RTKN-208ENST00000479256 EVA1CP58658 441 aa22.21■■□□□ 1.15
RTKN-208ENST00000479256 CDK12Q9NYV4 1490 aaPredicted RBP22.21■■□□□ 1.15
RTKN-208ENST00000479256 GLI3P10071 1580 aa22.21■■□□□ 1.15
RTKN-208ENST00000479256 COL14A1Q05707 1796 aaKnown RBP22.2■■□□□ 1.14
RTKN-208ENST00000479256 A0A0G2JS52 829 aa22.2■■□□□ 1.14
RTKN-208ENST00000479256 MYT1Q01538 1121 aa22.2■■□□□ 1.14
RTKN-208ENST00000479256 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
RTKN-208ENST00000479256 FAM98CQ17RN3 349 aaKnown RBP22.19■■□□□ 1.14
RTKN-208ENST00000479256 SEPT12Q8IYM1 358 aa22.19■■□□□ 1.14
RTKN-208ENST00000479256 MON2Q7Z3U7 1717 aa22.18■■□□□ 1.14
RTKN-208ENST00000479256 LARP1Q6PKG0 1096 aaKnown RBP22.18■■□□□ 1.14
RTKN-208ENST00000479256 SLIT3O75094 1523 aa22.17■■□□□ 1.14
RTKN-208ENST00000479256 EDC4Q6P2E9 1401 aaKnown RBP22.17■■□□□ 1.14
RTKN-208ENST00000479256 CPDO75976 1380 aa22.17■■□□□ 1.14
RTKN-208ENST00000479256 C11orf95C9JLR9 678 aaPredicted RBP22.17■■□□□ 1.14
RTKN-208ENST00000479256 FBLN1P23142 703 aa22.17■■□□□ 1.14
RTKN-208ENST00000479256 CDCA8Q53HL2 280 aa22.17■■□□□ 1.14
RTKN-208ENST00000479256 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.17■■□□□ 1.14
RTKN-208ENST00000479256 CAMTA1Q9Y6Y1 1673 aa22.17■■□□□ 1.14
RTKN-208ENST00000479256 AXIN2Q9Y2T1 843 aa22.16■■□□□ 1.14
RTKN-208ENST00000479256 NRAPQ86VF7 1730 aa22.16■■□□□ 1.14
RTKN-208ENST00000479256 NWD2Q9ULI1 1742 aa22.16■■□□□ 1.14
RTKN-208ENST00000479256 ANKRD36BQ8N2N9 1353 aa22.15■■□□□ 1.14
RTKN-208ENST00000479256 NINLQ9Y2I6 1382 aa22.15■■□□□ 1.14
RTKN-208ENST00000479256 SPATA31A5Q5VU36 1347 aa22.15■■□□□ 1.14
RTKN-208ENST00000479256 SPATA31A7Q8IWB4 1347 aa22.15■■□□□ 1.14
RTKN-208ENST00000479256 UPF1Q92900 1129 aaKnown RBP eCLIP22.15■■□□□ 1.149e-8■■■□□ 15.9
RTKN-208ENST00000479256 ARHGEF25Q86VW2 580 aa22.14■■□□□ 1.13
RTKN-208ENST00000479256 KCNH5Q8NCM2 988 aa22.14■■□□□ 1.13
RTKN-208ENST00000479256 CARD14Q9BXL6 1004 aa22.14■■□□□ 1.13
RTKN-208ENST00000479256 USP31Q70CQ4 1352 aa22.13■■□□□ 1.13
RTKN-208ENST00000479256 GGNBP2Q9H3C7 697 aa22.13■■□□□ 1.13
RTKN-208ENST00000479256 SPATA31A1Q5TZJ5 1347 aa22.11■■□□□ 1.13
RTKN-208ENST00000479256 FAM182BQ5T319 152 aa22.1■■□□□ 1.13
RTKN-208ENST00000479256 AATKQ6ZMQ8 1374 aa22.1■■□□□ 1.13
RTKN-208ENST00000479256 FYB1O15117 783 aa22.09■■□□□ 1.13
RTKN-208ENST00000479256 ONECUT3O60422 494 aaPredicted RBP22.09■■□□□ 1.13
RTKN-208ENST00000479256 COG3Q96JB2 828 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms