RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 NINLQ9Y2I6 1382 aa28.63■■■□□ 2.17
VARS-224ENST00000479051 USP6P35125 1406 aa28.63■■■□□ 2.17
VARS-224ENST00000479051 C8orf37Q96NL8 207 aa28.62■■■□□ 2.17
VARS-224ENST00000479051 PLEKHG5O94827 1062 aa28.6■■■□□ 2.17
VARS-224ENST00000479051 HSPA5P11021 654 aaKnown RBP28.6■■■□□ 2.17
VARS-224ENST00000479051 HDGFL2Q7Z4V5 671 aaPredicted RBP28.6■■■□□ 2.17
VARS-224ENST00000479051 ABTB2Q8N961 1025 aa28.59■■■□□ 2.17
VARS-224ENST00000479051 TERF2IPQ9NYB0 399 aa28.59■■■□□ 2.17
VARS-224ENST00000479051 AKAP12Q02952 1782 aa28.58■■■□□ 2.17
VARS-224ENST00000479051 ZNF772Q68DY9 489 aaPredicted RBP28.58■■■□□ 2.17
VARS-224ENST00000479051 CABLES1Q8TDN4 633 aa28.58■■■□□ 2.17
VARS-224ENST00000479051 NGLY1Q96IV0 654 aa28.58■■■□□ 2.17
VARS-224ENST00000479051 KTN1Q86UP2 1357 aaKnown RBP28.58■■■□□ 2.17
VARS-224ENST00000479051 CPSF1Q10570 1443 aaKnown RBP28.58■■■□□ 2.17
VARS-224ENST00000479051 SLC12A5Q9H2X9 1139 aa28.57■■■□□ 2.16
VARS-224ENST00000479051 AFF2P51816 1311 aa28.55■■■□□ 2.16
VARS-224ENST00000479051 RGS17Q9UGC6 210 aaPredicted RBP28.55■■■□□ 2.16
VARS-224ENST00000479051 MARF1Q9Y4F3 1742 aaKnown RBP28.54■■■□□ 2.16
VARS-224ENST00000479051 TTC21AQ8NDW8 1320 aa28.53■■■□□ 2.16
VARS-224ENST00000479051 ABCA3Q99758 1704 aa28.53■■■□□ 2.16
VARS-224ENST00000479051 NLRP13Q86W25 1043 aa28.53■■■□□ 2.16
VARS-224ENST00000479051 SSH2Q76I76 1423 aa28.52■■■□□ 2.16
VARS-224ENST00000479051 NUTM2GQ5VZR2 741 aa28.52■■■□□ 2.16
VARS-224ENST00000479051 TTC21BQ7Z4L5 1316 aa28.51■■■□□ 2.15
VARS-224ENST00000479051 MON2Q7Z3U7 1717 aa28.51■■■□□ 2.15
VARS-224ENST00000479051 CD163L1Q9NR16 1453 aa28.51■■■□□ 2.15
VARS-224ENST00000479051 A0A1W2PP64 1363 aa28.5■■■□□ 2.15
VARS-224ENST00000479051 NLRP6P59044 892 aa28.48■■■□□ 2.15
VARS-224ENST00000479051 NRKQ7Z2Y5 1582 aa28.48■■■□□ 2.15
VARS-224ENST00000479051 EDC4Q6P2E9 1401 aaKnown RBP28.47■■■□□ 2.15
VARS-224ENST00000479051 FNBP4Q8N3X1 1017 aaPredicted RBP28.47■■■□□ 2.15
VARS-224ENST00000479051 USP21Q9UK80 565 aa28.47■■■□□ 2.15
VARS-224ENST00000479051 ANKRD36BQ8N2N9 1353 aa28.47■■■□□ 2.15
VARS-224ENST00000479051 CRYBG1Q9Y4K1 1723 aa28.46■■■□□ 2.15
VARS-224ENST00000479051 POTEAQ6S8J7 498 aa28.46■■■□□ 2.15
VARS-224ENST00000479051 USP19O94966 1318 aa28.45■■■□□ 2.15
VARS-224ENST00000479051 PHRF1Q9P1Y6 1649 aaKnown RBP28.45■■■□□ 2.14
VARS-224ENST00000479051 POLR3GLQ9BT43 218 aa28.45■■■□□ 2.14
VARS-224ENST00000479051 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.44■■■□□ 2.14
VARS-224ENST00000479051 PIK3C2AO00443 1686 aa28.43■■■□□ 2.14
VARS-224ENST00000479051 PRDM11Q9NQV5 511 aa28.42■■■□□ 2.14
VARS-224ENST00000479051 ILDR2Q71H61 639 aa28.4■■■□□ 2.14
VARS-224ENST00000479051 QTRT2Q9H974 415 aaKnown RBP28.4■■■□□ 2.14
VARS-224ENST00000479051 TRPC5Q9UL62 973 aaPredicted RBP28.4■■■□□ 2.14
VARS-224ENST00000479051 SLIT2O94813 1529 aa28.39■■■□□ 2.14
VARS-224ENST00000479051 FAM83GA6ND36 823 aa28.39■■■□□ 2.14
VARS-224ENST00000479051 GCP02774 474 aa28.39■■■□□ 2.14
VARS-224ENST00000479051 COL14A1Q05707 1796 aaKnown RBP28.39■■■□□ 2.13
VARS-224ENST00000479051 UNC5CLQ8IV45 518 aa28.38■■■□□ 2.13
VARS-224ENST00000479051 KCNH5Q8NCM2 988 aa28.38■■■□□ 2.13
VARS-224ENST00000479051 KIAA0232Q92628 1395 aa28.37■■■□□ 2.13
VARS-224ENST00000479051 RXRBP28702 533 aa28.37■■■□□ 2.13
VARS-224ENST00000479051 ZC3H6P61129 1189 aaKnown RBP28.37■■■□□ 2.13
VARS-224ENST00000479051 BCL9LQ86UU0 1499 aa28.37■■■□□ 2.13
VARS-224ENST00000479051 SLIT3O75094 1523 aa28.37■■■□□ 2.13
VARS-224ENST00000479051 USP31Q70CQ4 1352 aa28.37■■■□□ 2.13
VARS-224ENST00000479051 MYOM1P52179 1685 aa28.36■■■□□ 2.13
VARS-224ENST00000479051 PLCH1Q4KWH8 1693 aa28.36■■■□□ 2.13
VARS-224ENST00000479051 NWD2Q9ULI1 1742 aa28.36■■■□□ 2.13
VARS-224ENST00000479051 NME9Q86XW9 330 aa28.36■■■□□ 2.13
VARS-224ENST00000479051 CPDO75976 1380 aa28.36■■■□□ 2.13
VARS-224ENST00000479051 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.35■■■□□ 2.13
VARS-224ENST00000479051 RBM6P78332 1123 aaKnown RBP28.33■■■□□ 2.13
VARS-224ENST00000479051 BTG4Q9NY30 223 aa28.33■■■□□ 2.13
VARS-224ENST00000479051 ATRNO75882 1429 aa28.33■■■□□ 2.13
VARS-224ENST00000479051 CHRNA2Q15822 529 aa28.31■■■□□ 2.12
VARS-224ENST00000479051 USP54Q70EL1 1684 aa28.3■■■□□ 2.12
VARS-224ENST00000479051 ZRANB1Q9UGI0 708 aa28.29■■■□□ 2.12
VARS-224ENST00000479051 ZBTB7CA1YPR0 619 aa28.28■■■□□ 2.12
VARS-224ENST00000479051 C11orf95C9JLR9 678 aaPredicted RBP28.28■■■□□ 2.12
VARS-224ENST00000479051 SOX12O15370 315 aa28.28■■■□□ 2.12
VARS-224ENST00000479051 COG3Q96JB2 828 aa28.28■■■□□ 2.12
VARS-224ENST00000479051 NSD3Q9BZ95 1437 aa28.27■■■□□ 2.12
VARS-224ENST00000479051 KIF7Q2M1P5 1343 aa28.27■■■□□ 2.12
VARS-224ENST00000479051 ZEB1P37275 1124 aaPredicted RBP28.27■■■□□ 2.12
VARS-224ENST00000479051 CCDC9Q9Y3X0 531 aaKnown RBP28.27■■■□□ 2.12
VARS-224ENST00000479051 OVOS2A0A0J9YW53 1432 aa28.26■■■□□ 2.12
VARS-224ENST00000479051 OVOS2Q6IE36 1432 aa28.26■■■□□ 2.12
VARS-224ENST00000479051 VPS72Q15906 364 aa28.26■■■□□ 2.11
VARS-224ENST00000479051 GJD4Q96KN9 370 aaPredicted RBP28.26■■■□□ 2.11
VARS-224ENST00000479051 CDK12Q9NYV4 1490 aaPredicted RBP28.26■■■□□ 2.11
VARS-224ENST00000479051 NRAPQ86VF7 1730 aa28.24■■■□□ 2.11
VARS-224ENST00000479051 AATKQ6ZMQ8 1374 aa28.24■■■□□ 2.11
VARS-224ENST00000479051 EVA1CP58658 441 aa28.23■■■□□ 2.11
VARS-224ENST00000479051 CARD14Q9BXL6 1004 aa28.23■■■□□ 2.11
VARS-224ENST00000479051 NFAT5O94916 1531 aa28.23■■■□□ 2.11
VARS-224ENST00000479051 FYB1O15117 783 aa28.22■■■□□ 2.11
VARS-224ENST00000479051 ARHGEF25Q86VW2 580 aa28.22■■■□□ 2.11
VARS-224ENST00000479051 CGNL1Q0VF96 1302 aa28.21■■■□□ 2.11
VARS-224ENST00000479051 PANK3Q9H999 370 aa28.21■■■□□ 2.11
VARS-224ENST00000479051 STRN4Q9NRL3 753 aa28.21■■■□□ 2.11
VARS-224ENST00000479051 KIF20BQ96Q89 1820 aa28.2■■■□□ 2.11
VARS-224ENST00000479051 GGNBP2Q9H3C7 697 aa28.2■■■□□ 2.1
VARS-224ENST00000479051 LMO7Q8WWI1 1683 aa28.19■■■□□ 2.1
VARS-224ENST00000479051 CAMTA1Q9Y6Y1 1673 aa28.18■■■□□ 2.1
VARS-224ENST00000479051 CCDC7Q96M83 1385 aa28.17■■■□□ 2.1
VARS-224ENST00000479051 ABCC6O95255 1503 aa28.17■■■□□ 2.1
VARS-224ENST00000479051 GLI3P10071 1580 aa28.16■■■□□ 2.1
VARS-224ENST00000479051 RGS12O14924 1447 aa28.15■■■□□ 2.1
VARS-224ENST00000479051 COL5A2P05997 1499 aaPredicted RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms