RNA–Protein interactions for RNA: ENST00000478886.1

CMTM6-202, Transcript of CKLF like MARVEL transmembrane domain containing 6, humanhuman

TSL 2

Gene CMTM6, Length 803 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM6-202ENST00000478886 SLC10A3P09131 477 aa11.71□□□□□ -0.53
CMTM6-202ENST00000478886 RSPH4AQ5TD94 716 aa11.71□□□□□ -0.53
CMTM6-202ENST00000478886 TEX14Q8IWB6 1497 aa11.7□□□□□ -0.54
CMTM6-202ENST00000478886 CDC42BPBQ9Y5S2 1711 aa11.7□□□□□ -0.54
CMTM6-202ENST00000478886 MDM2Q00987 491 aaPredicted RBP11.7□□□□□ -0.54
CMTM6-202ENST00000478886 KMT5BQ4FZB7 885 aa11.7□□□□□ -0.54
CMTM6-202ENST00000478886 SULF1Q8IWU6 871 aa11.7□□□□□ -0.54
CMTM6-202ENST00000478886 CFDP1Q9UEE9 299 aaPredicted RBP11.7□□□□□ -0.54
CMTM6-202ENST00000478886 DDX11L8A8MPP1 907 aa11.69□□□□□ -0.54
CMTM6-202ENST00000478886 RDH13Q8NBN7 331 aa11.69□□□□□ -0.54
CMTM6-202ENST00000478886 MIA2Q96PC5 1412 aa11.69□□□□□ -0.54
CMTM6-202ENST00000478886 EFCAB2Q5VUJ9 269 aa11.68□□□□□ -0.54
CMTM6-202ENST00000478886 ZNF777Q9ULD5 760 aaPredicted RBP11.68□□□□□ -0.54
CMTM6-202ENST00000478886 FANCAO15360 1455 aa11.68□□□□□ -0.54
CMTM6-202ENST00000478886 PPRC1Q5VV67 1664 aaKnown RBP11.68□□□□□ -0.54
CMTM6-202ENST00000478886 FGD6Q6ZV73 1430 aa11.68□□□□□ -0.54
CMTM6-202ENST00000478886 IFFO2Q5TF58 517 aa11.67□□□□□ -0.54
CMTM6-202ENST00000478886 PTPN23Q9H3S7 1636 aa11.67□□□□□ -0.54
CMTM6-202ENST00000478886 NEO1Q92859 1461 aa11.66□□□□□ -0.54
CMTM6-202ENST00000478886 CLCN1P35523 988 aa11.66□□□□□ -0.54
CMTM6-202ENST00000478886 KCNC4Q03721 635 aa11.66□□□□□ -0.54
CMTM6-202ENST00000478886 MTRQ99707 1265 aa11.66□□□□□ -0.54
CMTM6-202ENST00000478886 CAMSAP2Q08AD1 1489 aa11.65□□□□□ -0.54
CMTM6-202ENST00000478886 PLEKHH2Q8IVE3 1493 aa11.65□□□□□ -0.54
CMTM6-202ENST00000478886 ACTN4O43707 911 aaKnown RBP11.65□□□□□ -0.54
CMTM6-202ENST00000478886 TJAP1Q5JTD0 557 aa11.65□□□□□ -0.54
CMTM6-202ENST00000478886 GPCPD1Q9NPB8 672 aa11.65□□□□□ -0.54
CMTM6-202ENST00000478886 PCDHB3Q9Y5E6 796 aa11.65□□□□□ -0.54
CMTM6-202ENST00000478886 SAMD9LQ8IVG5 1584 aa11.65□□□□□ -0.54
CMTM6-202ENST00000478886 AKNAQ7Z591 1439 aa11.64□□□□□ -0.55
CMTM6-202ENST00000478886 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
CMTM6-202ENST00000478886 ADGRL1O94910 1474 aa11.63□□□□□ -0.55
CMTM6-202ENST00000478886 TCOF1Q13428 1488 aaKnown RBP11.63□□□□□ -0.55
CMTM6-202ENST00000478886 RRBP1Q9P2E9 1410 aaKnown RBP11.63□□□□□ -0.55
CMTM6-202ENST00000478886 FAM50AQ14320 339 aaKnown RBP11.63□□□□□ -0.55
CMTM6-202ENST00000478886 AK7Q96M32 723 aa11.63□□□□□ -0.55
CMTM6-202ENST00000478886 ABCC1P33527 1531 aa11.63□□□□□ -0.55
CMTM6-202ENST00000478886 SYCP2Q9BX26 1530 aa11.62□□□□□ -0.55
CMTM6-202ENST00000478886 COPS2P61201 443 aa11.62□□□□□ -0.55
CMTM6-202ENST00000478886 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
CMTM6-202ENST00000478886 AMHR2Q16671 573 aa11.62□□□□□ -0.55
CMTM6-202ENST00000478886 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
CMTM6-202ENST00000478886 ZNF644Q9H582 1327 aaPredicted RBP11.6□□□□□ -0.55
CMTM6-202ENST00000478886 SCAPERQ9BY12 1400 aa11.6□□□□□ -0.55
CMTM6-202ENST00000478886 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
CMTM6-202ENST00000478886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.6□□□□□ -0.55
CMTM6-202ENST00000478886 TRIM66O15016 1216 aa11.6□□□□□ -0.55
CMTM6-202ENST00000478886 CD46P15529 392 aa11.6□□□□□ -0.55
CMTM6-202ENST00000478886 BLOC1S3Q6QNY0 202 aa11.6□□□□□ -0.55
CMTM6-202ENST00000478886 SLC24A3Q9HC58 644 aa11.6□□□□□ -0.55
CMTM6-202ENST00000478886 ARHGEF5Q12774 1597 aa11.59□□□□□ -0.55
CMTM6-202ENST00000478886 DENND4BO75064 1496 aaPredicted RBP11.59□□□□□ -0.55
CMTM6-202ENST00000478886 GCGRP47871 477 aa11.59□□□□□ -0.55
CMTM6-202ENST00000478886 FAM217BQ9NTX9 383 aaPredicted RBP11.59□□□□□ -0.55
CMTM6-202ENST00000478886 DNMT1P26358 1616 aaKnown RBP11.58□□□□□ -0.56
CMTM6-202ENST00000478886 HNRNPMP52272 730 aaKnown RBP eCLIP11.58□□□□□ -0.56
CMTM6-202ENST00000478886 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
CMTM6-202ENST00000478886 KDM6BO15054 1643 aa11.57□□□□□ -0.56
CMTM6-202ENST00000478886 ARHGEF12Q9NZN5 1544 aa11.57□□□□□ -0.56
CMTM6-202ENST00000478886 A0A0G2JS52 829 aa11.57□□□□□ -0.56
CMTM6-202ENST00000478886 ZNF516Q92618 1163 aa11.57□□□□□ -0.56
CMTM6-202ENST00000478886 REPIN1Q9BWE0 567 aaKnown RBP11.57□□□□□ -0.56
CMTM6-202ENST00000478886 POGZQ7Z3K3 1410 aa11.57□□□□□ -0.56
CMTM6-202ENST00000478886 ZNF518AQ6AHZ1 1483 aa11.57□□□□□ -0.56
CMTM6-202ENST00000478886 CROCC2H7BZ55 1655 aa11.56□□□□□ -0.56
CMTM6-202ENST00000478886 DAPK1P53355 1430 aa11.56□□□□□ -0.56
CMTM6-202ENST00000478886 MBD5Q9P267 1494 aa11.56□□□□□ -0.56
CMTM6-202ENST00000478886 RICTORQ6R327 1708 aa11.55□□□□□ -0.56
CMTM6-202ENST00000478886 TRAPPC8Q9Y2L5 1435 aa11.55□□□□□ -0.56
CMTM6-202ENST00000478886 ZPR1O75312 459 aa11.55□□□□□ -0.56
CMTM6-202ENST00000478886 TSPY4P0CV99 314 aa11.55□□□□□ -0.56
CMTM6-202ENST00000478886 TSPY10P0CW01 314 aa11.55□□□□□ -0.56
CMTM6-202ENST00000478886 ITGAEP38570 1179 aa11.55□□□□□ -0.56
CMTM6-202ENST00000478886 FUT2Q10981 343 aa11.55□□□□□ -0.56
CMTM6-202ENST00000478886 TRIM26Q12899 539 aaPredicted RBP11.55□□□□□ -0.56
CMTM6-202ENST00000478886 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
CMTM6-202ENST00000478886 NR1I2O75469 434 aa11.54□□□□□ -0.56
CMTM6-202ENST00000478886 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
CMTM6-202ENST00000478886 SHANK2Q9UPX8 1470 aa11.54□□□□□ -0.56
CMTM6-202ENST00000478886 KDM5CP41229 1560 aa11.54□□□□□ -0.56
CMTM6-202ENST00000478886 FRMPD1Q5SYB0 1578 aa11.54□□□□□ -0.56
CMTM6-202ENST00000478886 ABCC5O15440 1437 aa11.53□□□□□ -0.56
CMTM6-202ENST00000478886 RAPGEF3O95398 923 aa11.53□□□□□ -0.56
CMTM6-202ENST00000478886 PUS10Q3MIT2 529 aaKnown RBP11.53□□□□□ -0.56
CMTM6-202ENST00000478886 SPAG9O60271 1321 aaKnown RBP11.53□□□□□ -0.56
CMTM6-202ENST00000478886 HECW2Q9P2P5 1572 aa11.53□□□□□ -0.56
CMTM6-202ENST00000478886 ADGBQ8N7X0 1667 aa11.52□□□□□ -0.56
CMTM6-202ENST00000478886 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.56
CMTM6-202ENST00000478886 ATP6V1AP38606 617 aa11.52□□□□□ -0.57
CMTM6-202ENST00000478886 AFAP1Q8N556 730 aa11.52□□□□□ -0.57
CMTM6-202ENST00000478886 MAST1Q9Y2H9 1570 aa11.52□□□□□ -0.57
CMTM6-202ENST00000478886 ZMYM4Q5VZL5 1548 aa11.51□□□□□ -0.57
CMTM6-202ENST00000478886 KDM4AO75164 1064 aa11.51□□□□□ -0.57
CMTM6-202ENST00000478886 SSTR3P32745 418 aaPredicted RBP11.51□□□□□ -0.57
CMTM6-202ENST00000478886 PDE4DQ08499 809 aa11.51□□□□□ -0.57
CMTM6-202ENST00000478886 COL17A1Q9UMD9 1497 aaPredicted RBP11.51□□□□□ -0.57
CMTM6-202ENST00000478886 ATP7AQ04656 1500 aa11.5□□□□□ -0.57
CMTM6-202ENST00000478886 ZFYVE16Q7Z3T8 1539 aa11.5□□□□□ -0.57
CMTM6-202ENST00000478886 INO80Q9ULG1 1556 aaPredicted RBP11.5□□□□□ -0.57
CMTM6-202ENST00000478886 TLL1O43897 1013 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms