RNA–Protein interactions for RNA: ENST00000478862.1

NCK1-206, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-206ENST00000478862 ZNF511Q8NB15 262 aa8.46□□□□□ -1.06
NCK1-206ENST00000478862 SCARF1Q14162 830 aa8.45□□□□□ -1.06
NCK1-206ENST00000478862 NXF1Q9UBU9 619 aaKnown RBP8.45□□□□□ -1.06
NCK1-206ENST00000478862 BMP1P13497 986 aa8.44□□□□□ -1.06
NCK1-206ENST00000478862 NPAS3Q8IXF0 933 aa8.44□□□□□ -1.06
NCK1-206ENST00000478862 FAM174AQ8TBP5 190 aa8.44□□□□□ -1.06
NCK1-206ENST00000478862 TBC1D2Q9BYX2 928 aa8.44□□□□□ -1.06
NCK1-206ENST00000478862 MPNDQ8N594 471 aa8.43□□□□□ -1.06
NCK1-206ENST00000478862 IRF7Q92985 503 aa8.43□□□□□ -1.06
NCK1-206ENST00000478862 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
NCK1-206ENST00000478862 TLL2Q9Y6L7 1015 aa8.42□□□□□ -1.06
NCK1-206ENST00000478862 NNTQ13423 1086 aa8.41□□□□□ -1.06
NCK1-206ENST00000478862 RSBN1LQ6PCB5 846 aaPredicted RBP8.41□□□□□ -1.06
NCK1-206ENST00000478862 LYPD8Q6UX82 237 aa8.41□□□□□ -1.06
NCK1-206ENST00000478862 SLC24A3Q9HC58 644 aa8.41□□□□□ -1.06
NCK1-206ENST00000478862 AGERQ15109 404 aa8.4□□□□□ -1.06
NCK1-206ENST00000478862 TRIM46Q7Z4K8 759 aa8.4□□□□□ -1.06
NCK1-206ENST00000478862 ADH1CP00326 375 aa8.39□□□□□ -1.07
NCK1-206ENST00000478862 ARID5BQ14865 1188 aa8.39□□□□□ -1.07
NCK1-206ENST00000478862 PRPF38BQ5VTL8 546 aaKnown RBP8.39□□□□□ -1.07
NCK1-206ENST00000478862 AK7Q96M32 723 aa8.39□□□□□ -1.07
NCK1-206ENST00000478862 ZFP42Q96MM3 310 aa8.39□□□□□ -1.07
NCK1-206ENST00000478862 SPTLC1O15269 473 aa8.38□□□□□ -1.07
NCK1-206ENST00000478862 WDR4P57081 412 aaKnown RBP8.38□□□□□ -1.07
NCK1-206ENST00000478862 MRPL14Q6P1L8 145 aaKnown RBP8.38□□□□□ -1.07
NCK1-206ENST00000478862 RIC3Q7Z5B4 369 aa8.38□□□□□ -1.07
NCK1-206ENST00000478862 NUTM2BA6NNL0 878 aaPredicted RBP8.37□□□□□ -1.07
NCK1-206ENST00000478862 NUTM2EB1AL46 878 aaPredicted RBP8.37□□□□□ -1.07
NCK1-206ENST00000478862 HRCP23327 699 aa8.37□□□□□ -1.07
NCK1-206ENST00000478862 NUTM2DQ5VT03 806 aaPredicted RBP8.37□□□□□ -1.07
NCK1-206ENST00000478862 NUTM2AQ8IVF1 878 aaPredicted RBP8.37□□□□□ -1.07
NCK1-206ENST00000478862 PARP9Q8IXQ6 854 aa8.37□□□□□ -1.07
NCK1-206ENST00000478862 ARMC2Q8NEN0 867 aa8.37□□□□□ -1.07
NCK1-206ENST00000478862 TSC1Q92574 1164 aa8.37□□□□□ -1.07
NCK1-206ENST00000478862 UPP2O95045 317 aa8.36□□□□□ -1.07
NCK1-206ENST00000478862 BPHLQ86WA6 291 aaPredicted RBP8.36□□□□□ -1.07
NCK1-206ENST00000478862 PCDHB15Q9Y5E8 787 aa8.36□□□□□ -1.07
NCK1-206ENST00000478862 CFAP99D6REC4 459 aa8.35□□□□□ -1.07
NCK1-206ENST00000478862 TRIM66O15016 1216 aa8.35□□□□□ -1.07
NCK1-206ENST00000478862 NR5A1Q13285 461 aa8.35□□□□□ -1.07
NCK1-206ENST00000478862 CSPP1Q1MSJ5 1256 aa8.35□□□□□ -1.07
NCK1-206ENST00000478862 H3BM21 787 aa8.34□□□□□ -1.07
NCK1-206ENST00000478862 TIMP2P16035 220 aa8.34□□□□□ -1.07
NCK1-206ENST00000478862 GMPRP36959 345 aa8.34□□□□□ -1.07
NCK1-206ENST00000478862 ZSCAN1Q8NBB4 408 aa8.34□□□□□ -1.07
NCK1-206ENST00000478862 CDK15Q96Q40 435 aa8.34□□□□□ -1.07
NCK1-206ENST00000478862 PURBQ96QR8 312 aaKnown RBP8.34□□□□□ -1.07
NCK1-206ENST00000478862 VEGFBP49765 207 aa8.33□□□□□ -1.08
NCK1-206ENST00000478862 HELBQ8NG08 1087 aaPredicted RBP8.33□□□□□ -1.08
NCK1-206ENST00000478862 FOXJ1Q92949 421 aa8.33□□□□□ -1.08
NCK1-206ENST00000478862 MAP10Q9P2G4 905 aa8.33□□□□□ -1.08
NCK1-206ENST00000478862 MAN1A2O60476 641 aa8.32□□□□□ -1.08
NCK1-206ENST00000478862 ZIC2O95409 532 aaPredicted RBP8.32□□□□□ -1.08
NCK1-206ENST00000478862 F12P00748 615 aaPredicted RBP8.32□□□□□ -1.08
NCK1-206ENST00000478862 LCE2CQ5TA81 110 aa8.32□□□□□ -1.08
NCK1-206ENST00000478862 NBPF14Q5TI25 921 aa8.32□□□□□ -1.08
NCK1-206ENST00000478862 CABLES1Q8TDN4 633 aa8.31□□□□□ -1.08
NCK1-206ENST00000478862 BMP2P12643 396 aa8.29□□□□□ -1.08
NCK1-206ENST00000478862 TUSC1Q2TAM9 212 aa8.29□□□□□ -1.08
NCK1-206ENST00000478862 C6orf118Q5T5N4 469 aa8.29□□□□□ -1.08
NCK1-206ENST00000478862 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
NCK1-206ENST00000478862 BRPF1P55201 1214 aaPredicted RBP8.28□□□□□ -1.08
NCK1-206ENST00000478862 NEUROD2Q15784 382 aa8.28□□□□□ -1.08
NCK1-206ENST00000478862 MYSM1Q5VVJ2 828 aa8.28□□□□□ -1.08
NCK1-206ENST00000478862 KLF16Q9BXK1 252 aaPredicted RBP8.28□□□□□ -1.08
NCK1-206ENST00000478862 PER1O15534 1290 aaPredicted RBP8.27□□□□□ -1.09
NCK1-206ENST00000478862 PDE4DQ08499 809 aa8.27□□□□□ -1.09
NCK1-206ENST00000478862 VASH1Q7L8A9 365 aaPredicted RBP8.27□□□□□ -1.09
NCK1-206ENST00000478862 ITPKCQ96DU7 683 aa8.27□□□□□ -1.09
NCK1-206ENST00000478862 ZFAND3Q9H8U3 227 aa8.27□□□□□ -1.09
NCK1-206ENST00000478862 ERBB4Q15303 1308 aa8.26□□□□□ -1.09
NCK1-206ENST00000478862 MAGEB6P1A0A0J9YX57 407 aa8.25□□□□□ -1.09
NCK1-206ENST00000478862 GRM5P41594 1212 aa8.25□□□□□ -1.09
NCK1-206ENST00000478862 QPCTQ16769 361 aa8.25□□□□□ -1.09
NCK1-206ENST00000478862 GPKOWQ92917 476 aaPredicted RBP eCLIP8.25□□□□□ -1.09
NCK1-206ENST00000478862 TSEN34Q9BSV6 310 aaKnown RBP8.25□□□□□ -1.09
NCK1-206ENST00000478862 LIMD1Q9UGP4 676 aa8.25□□□□□ -1.09
NCK1-206ENST00000478862 MAP4K5Q9Y4K4 846 aa8.25□□□□□ -1.09
NCK1-206ENST00000478862 EMILIN1Q9Y6C2 1016 aa8.25□□□□□ -1.09
NCK1-206ENST00000478862 SOBPA7XYQ1 873 aa8.24□□□□□ -1.09
NCK1-206ENST00000478862 LILRB3O75022 631 aa8.24□□□□□ -1.09
NCK1-206ENST00000478862 NR3C2P08235 984 aa8.24□□□□□ -1.09
NCK1-206ENST00000478862 FSHRP23945 695 aa8.24□□□□□ -1.09
NCK1-206ENST00000478862 LINC00528Q8N1L1 170 aa8.24□□□□□ -1.09
NCK1-206ENST00000478862 CLK2P49760 499 aaKnown RBP8.23□□□□□ -1.09
NCK1-206ENST00000478862 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
NCK1-206ENST00000478862 MEIOBQ8N635 442 aa8.23□□□□□ -1.09
NCK1-206ENST00000478862 VSIG8P0DPA2 414 aa8.22□□□□□ -1.09
NCK1-206ENST00000478862 TRMT44Q8IYL2 757 aaKnown RBP8.22□□□□□ -1.09
NCK1-206ENST00000478862 CCDC116Q8IYX3 515 aa8.22□□□□□ -1.09
NCK1-206ENST00000478862 C1QTNF2Q9BXJ5 285 aa8.22□□□□□ -1.09
NCK1-206ENST00000478862 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
NCK1-206ENST00000478862 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
NCK1-206ENST00000478862 ATP1B4Q9UN42 357 aaPredicted RBP8.22□□□□□ -1.09
NCK1-206ENST00000478862 GPBP1L1Q9HC44 474 aaPredicted RBP8.21□□□□□ -1.1
NCK1-206ENST00000478862 RTL5Q5HYW3 569 aaPredicted RBP8.2□□□□□ -1.1
NCK1-206ENST00000478862 SH3BP5LQ7L8J4 393 aa8.2□□□□□ -1.1
NCK1-206ENST00000478862 SH3RF1Q7Z6J0 888 aa8.2□□□□□ -1.1
NCK1-206ENST00000478862 POLR3EQ9NVU0 708 aa8.2□□□□□ -1.1
NCK1-206ENST00000478862 CDV3Q9UKY7 258 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms