RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 VPS72Q15906 364 aa16.31■□□□□ 0.2
PDCD11-204ENST00000478543 KRT27Q7Z3Y8 459 aa16.31■□□□□ 0.2
PDCD11-204ENST00000478543 CABLES1Q8TDN4 633 aa16.31■□□□□ 0.2
PDCD11-204ENST00000478543 NRAPQ86VF7 1730 aa16.31■□□□□ 0.2
PDCD11-204ENST00000478543 C11orf95C9JLR9 678 aaPredicted RBP16.3■□□□□ 0.2
PDCD11-204ENST00000478543 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
PDCD11-204ENST00000478543 RGPD8O14715 1765 aaPredicted RBP16.29■□□□□ 0.2
PDCD11-204ENST00000478543 TNS1Q9HBL0 1735 aaKnown RBP16.29■□□□□ 0.2
PDCD11-204ENST00000478543 EN1Q05925 392 aaPredicted RBP16.29■□□□□ 0.2
PDCD11-204ENST00000478543 SIRT1Q96EB6 747 aa16.29■□□□□ 0.2
PDCD11-204ENST00000478543 UTRNP46939 3433 aa16.29■□□□□ 0.2
PDCD11-204ENST00000478543 TMF1P82094 1093 aa16.28■□□□□ 0.2
PDCD11-204ENST00000478543 R3HDM1Q15032 1099 aaKnown RBP16.28■□□□□ 0.2
PDCD11-204ENST00000478543 FAM182BQ5T319 152 aa16.28■□□□□ 0.2
PDCD11-204ENST00000478543 KIF1AQ12756 1690 aa16.27■□□□□ 0.2
PDCD11-204ENST00000478543 SBNO2Q9Y2G9 1366 aa16.27■□□□□ 0.2
PDCD11-204ENST00000478543 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
PDCD11-204ENST00000478543 TULP4Q9NRJ4 1543 aa16.27■□□□□ 0.2
PDCD11-204ENST00000478543 RGPD1P0DJD0 1748 aa16.27■□□□□ 0.19
PDCD11-204ENST00000478543 CCDC7Q96M83 1385 aa16.26■□□□□ 0.19
PDCD11-204ENST00000478543 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
PDCD11-204ENST00000478543 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
PDCD11-204ENST00000478543 BAG6P46379 1132 aa16.26■□□□□ 0.19
PDCD11-204ENST00000478543 TNS3Q68CZ2 1445 aa16.26■□□□□ 0.19
PDCD11-204ENST00000478543 EVC2Q86UK5 1308 aa16.24■□□□□ 0.19
PDCD11-204ENST00000478543 KRT28Q7Z3Y7 464 aa16.24■□□□□ 0.19
PDCD11-204ENST00000478543 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
PDCD11-204ENST00000478543 FAM83GA6ND36 823 aa16.23■□□□□ 0.19
PDCD11-204ENST00000478543 FAM98CQ17RN3 349 aaKnown RBP16.23■□□□□ 0.19
PDCD11-204ENST00000478543 ADGRB2O60241 1585 aa16.22■□□□□ 0.19
PDCD11-204ENST00000478543 SLC24A1O60721 1099 aa16.22■□□□□ 0.19
PDCD11-204ENST00000478543 THSD7AQ9UPZ6 1657 aa16.21■□□□□ 0.19
PDCD11-204ENST00000478543 DISP2A7MBM2 1401 aa16.21■□□□□ 0.19
PDCD11-204ENST00000478543 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.19
PDCD11-204ENST00000478543 EZH2Q15910 746 aaKnown RBP16.21■□□□□ 0.19
PDCD11-204ENST00000478543 CDK19Q9BWU1 502 aa16.21■□□□□ 0.19
PDCD11-204ENST00000478543 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
PDCD11-204ENST00000478543 WASLO00401 505 aaPredicted RBP16.2■□□□□ 0.18
PDCD11-204ENST00000478543 CDCA8Q53HL2 280 aa16.2■□□□□ 0.18
PDCD11-204ENST00000478543 YY1P25490 414 aa16.19■□□□□ 0.18
PDCD11-204ENST00000478543 DDX10Q13206 875 aaKnown RBP16.19■□□□□ 0.18
PDCD11-204ENST00000478543 A0A0G2JS52 829 aa16.18■□□□□ 0.18
PDCD11-204ENST00000478543 MYT1Q01538 1121 aa16.18■□□□□ 0.18
PDCD11-204ENST00000478543 TRPM3Q9HCF6 1732 aaPredicted RBP16.18■□□□□ 0.18
PDCD11-204ENST00000478543 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
PDCD11-204ENST00000478543 PHF8Q9UPP1 1060 aa16.17■□□□□ 0.18
PDCD11-204ENST00000478543 MYOM1P52179 1685 aa16.17■□□□□ 0.18
PDCD11-204ENST00000478543 RREB1Q92766 1687 aa16.17■□□□□ 0.18
PDCD11-204ENST00000478543 CRYBG1Q9Y4K1 1723 aa16.16■□□□□ 0.18
PDCD11-204ENST00000478543 SBNO1A3KN83 1393 aa16.16■□□□□ 0.18
PDCD11-204ENST00000478543 CAMKK2Q96RR4 588 aa16.16■□□□□ 0.18
PDCD11-204ENST00000478543 BTG4Q9NY30 223 aa16.16■□□□□ 0.18
PDCD11-204ENST00000478543 NUP188Q5SRE5 1749 aa16.16■□□□□ 0.18
PDCD11-204ENST00000478543 COL14A1Q05707 1796 aaKnown RBP16.15■□□□□ 0.18
PDCD11-204ENST00000478543 ALS2Q96Q42 1657 aa16.14■□□□□ 0.18
PDCD11-204ENST00000478543 CAMTA1Q9Y6Y1 1673 aa16.14■□□□□ 0.18
PDCD11-204ENST00000478543 LMOD2Q6P5Q4 547 aa16.14■□□□□ 0.17
PDCD11-204ENST00000478543 TMC1Q8TDI8 760 aa16.14■□□□□ 0.17
PDCD11-204ENST00000478543 NUDT16Q96DE0 195 aaKnown RBP16.13■□□□□ 0.17
PDCD11-204ENST00000478543 PUS7Q96PZ0 661 aaKnown RBP16.13■□□□□ 0.17
PDCD11-204ENST00000478543 ATP7BP35670 1465 aa16.13■□□□□ 0.17
PDCD11-204ENST00000478543 SPATA31A5Q5VU36 1347 aa16.13■□□□□ 0.17
PDCD11-204ENST00000478543 SPATA31A7Q8IWB4 1347 aa16.13■□□□□ 0.17
PDCD11-204ENST00000478543 PRR36Q9H6K5 1346 aa16.13■□□□□ 0.17
PDCD11-204ENST00000478543 ARHGEF10O15013 1369 aa16.12■□□□□ 0.17
PDCD11-204ENST00000478543 TRIM37O94972 964 aa16.1■□□□□ 0.17
PDCD11-204ENST00000478543 PSME1Q06323 249 aa16.1■□□□□ 0.17
PDCD11-204ENST00000478543 PMFBP1Q8TBY8 1022 aa16.1■□□□□ 0.17
PDCD11-204ENST00000478543 SLC12A5Q9H2X9 1139 aa16.1■□□□□ 0.17
PDCD11-204ENST00000478543 TOPAZ1Q8N9V7 1692 aa16.1■□□□□ 0.17
PDCD11-204ENST00000478543 PPIP5K1Q6PFW1 1433 aa16.1■□□□□ 0.17
PDCD11-204ENST00000478543 CABP1Q9NZU7 370 aa16.09■□□□□ 0.17
PDCD11-204ENST00000478543 ANKARQ7Z5J8 1434 aa16.09■□□□□ 0.17
PDCD11-204ENST00000478543 ITSN1Q15811 1721 aa16.08■□□□□ 0.17
PDCD11-204ENST00000478543 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.16
PDCD11-204ENST00000478543 PANK3Q9H999 370 aa16.08■□□□□ 0.16
PDCD11-204ENST00000478543 CCDC61Q9Y6R9 512 aa16.07■□□□□ 0.16
PDCD11-204ENST00000478543 NINLQ9Y2I6 1382 aa16.07■□□□□ 0.16
PDCD11-204ENST00000478543 A0A1W2PP64 1363 aa16.04■□□□□ 0.16
PDCD11-204ENST00000478543 ANKRD36BQ8N2N9 1353 aa16.04■□□□□ 0.16
PDCD11-204ENST00000478543 SPATA31A1Q5TZJ5 1347 aa16.04■□□□□ 0.16
PDCD11-204ENST00000478543 APBA3O96018 575 aa16.04■□□□□ 0.16
PDCD11-204ENST00000478543 HDGFL2Q7Z4V5 671 aaPredicted RBP16.04■□□□□ 0.16
PDCD11-204ENST00000478543 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
PDCD11-204ENST00000478543 PARD3Q8TEW0 1356 aa16.03■□□□□ 0.16
PDCD11-204ENST00000478543 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
PDCD11-204ENST00000478543 TERF2IPQ9NYB0 399 aa16.03■□□□□ 0.16
PDCD11-204ENST00000478543 PHRF1Q9P1Y6 1649 aaKnown RBP16.02■□□□□ 0.16
PDCD11-204ENST00000478543 NSD3Q9BZ95 1437 aa16.02■□□□□ 0.15
PDCD11-204ENST00000478543 ACEP12821 1306 aa16.01■□□□□ 0.15
PDCD11-204ENST00000478543 AKAP12Q02952 1782 aa16.01■□□□□ 0.15
PDCD11-204ENST00000478543 PLEKHG3A1L390 1219 aa16.01■□□□□ 0.15
PDCD11-204ENST00000478543 CHRNA2Q15822 529 aa16.01■□□□□ 0.15
PDCD11-204ENST00000478543 FAM196AQ6ZSG2 479 aa16.01■□□□□ 0.15
PDCD11-204ENST00000478543 NGDNQ8NEJ9 315 aaKnown RBP16.01■□□□□ 0.15
PDCD11-204ENST00000478543 CARD14Q9BXL6 1004 aa16.01■□□□□ 0.15
PDCD11-204ENST00000478543 KTN1Q86UP2 1357 aaKnown RBP16■□□□□ 0.15
PDCD11-204ENST00000478543 KNSTRNQ9Y448 316 aa16■□□□□ 0.15
PDCD11-204ENST00000478543 CPSF1Q10570 1443 aaKnown RBP16■□□□□ 0.15
PDCD11-204ENST00000478543 CASZ1Q86V15 1759 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms