RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 WDR63Q8IWG1 891 aa15.1■□□□□ 0.01
PCCB-214ENST00000478469 DDRGK1Q96HY6 314 aa15.1■□□□□ 0.01
PCCB-214ENST00000478469 DDX58O95786 925 aaKnown RBP15.1■□□□□ 0.01
PCCB-214ENST00000478469 GTF2E1P29083 439 aaPredicted RBP15.1■□□□□ 0.01
PCCB-214ENST00000478469 EXOSC9Q06265 439 aaKnown RBP15.1■□□□□ 0.01
PCCB-214ENST00000478469 DDX19BQ9UMR2 479 aa15.1■□□□□ 0.01
PCCB-214ENST00000478469 TTC21AQ8NDW8 1320 aa15.1■□□□□ 0.01
PCCB-214ENST00000478469 TAF7LQ5H9L4 462 aa15.09■□□□□ 0.01
PCCB-214ENST00000478469 SPG7Q9UQ90 795 aa15.09■□□□□ 0.01
PCCB-214ENST00000478469 TMPOP42166 694 aaKnown RBP15.09■□□□□ 0.01
PCCB-214ENST00000478469 NPHP3Q7Z494 1330 aa15.09■□□□□ 0.01
PCCB-214ENST00000478469 NFE2L2Q16236 605 aa15.08■□□□□ 0.01
PCCB-214ENST00000478469 PTPRTO14522 1441 aa15.08■□□□□ 0
PCCB-214ENST00000478469 TSR2Q969E8 191 aaKnown RBP15.08■□□□□ 0
PCCB-214ENST00000478469 DDX54Q8TDD1 881 aaKnown RBP15.07■□□□□ 0
PCCB-214ENST00000478469 SPATA31E1Q6ZUB1 1445 aa15.07■□□□□ 0
PCCB-214ENST00000478469 KCNJ4P48050 445 aa15.07■□□□□ 0
PCCB-214ENST00000478469 TRPM2O94759 1503 aa15.07■□□□□ 0
PCCB-214ENST00000478469 TWISTNBQ3B726 338 aaPredicted RBP15.07■□□□□ 0
PCCB-214ENST00000478469 CFAP44Q96MT7 982 aa15.07■□□□□ 0
PCCB-214ENST00000478469 C9orf78Q9NZ63 289 aaPredicted RBP15.07■□□□□ 0
PCCB-214ENST00000478469 ABCC11Q96J66 1382 aa15.06■□□□□ 0
PCCB-214ENST00000478469 WWC1Q8IX03 1113 aa15.05■□□□□ 0
PCCB-214ENST00000478469 ABCC3O15438 1527 aa15.05■□□□□ 0
PCCB-214ENST00000478469 UGGT1Q9NYU2 1555 aa15.05■□□□□ 0
PCCB-214ENST00000478469 FBLN1P23142 703 aa15.05■□□□□ 0
PCCB-214ENST00000478469 ERVK-7P63135 1459 aa15.05■□□□□ -0
PCCB-214ENST00000478469 LRRIQ1Q96JM4 1722 aa15.05■□□□□ -0
PCCB-214ENST00000478469 ASXL1Q8IXJ9 1541 aa15.05■□□□□ -0
PCCB-214ENST00000478469 CARD14Q9BXL6 1004 aa15.05■□□□□ -0
PCCB-214ENST00000478469 PRDM15P57071 1507 aaPredicted RBP15.05■□□□□ -0
PCCB-214ENST00000478469 EFCAB6Q5THR3 1501 aa15.04■□□□□ -0
PCCB-214ENST00000478469 TOM1O60784 492 aa15.04■□□□□ -0
PCCB-214ENST00000478469 CCDC30Q5VVM6 783 aa15.04■□□□□ -0
PCCB-214ENST00000478469 PLA2R1Q13018 1463 aa15.04■□□□□ -0
PCCB-214ENST00000478469 COL17A1Q9UMD9 1497 aaPredicted RBP15.04■□□□□ -0
PCCB-214ENST00000478469 ARHGAP31Q2M1Z3 1444 aa15.04■□□□□ -0
PCCB-214ENST00000478469 HSP90AB1P08238 724 aaKnown RBP15.04■□□□□ -0
PCCB-214ENST00000478469 GORABQ5T7V8 394 aa15.03■□□□□ -0
PCCB-214ENST00000478469 CABP4P57796 275 aa15.03■□□□□ -0
PCCB-214ENST00000478469 UBAP1LF5GYI3 381 aa15.03■□□□□ -0
PCCB-214ENST00000478469 CENPQQ7L2Z9 268 aaPredicted RBP15.03■□□□□ -0
PCCB-214ENST00000478469 PER1O15534 1290 aaPredicted RBP15.02■□□□□ -0
PCCB-214ENST00000478469 ADAMTS2O95450 1211 aa15.02■□□□□ -0
PCCB-214ENST00000478469 GNAT3A8MTJ3 354 aa15.02■□□□□ -0
PCCB-214ENST00000478469 USHBP1Q8N6Y0 703 aa15.02■□□□□ -0
PCCB-214ENST00000478469 A0A1W2PP64 1363 aa15.02■□□□□ -0
PCCB-214ENST00000478469 AIMP1Q12904 312 aaKnown RBP15.02□□□□□ -0.01
PCCB-214ENST00000478469 PANK1Q8TE04 598 aa15.02□□□□□ -0.01
PCCB-214ENST00000478469 SIRT1Q96EB6 747 aa15.02□□□□□ -0.01
PCCB-214ENST00000478469 CT47B1P0C2W7 299 aaPredicted RBP15.02□□□□□ -0.01
PCCB-214ENST00000478469 HDGFL1Q5TGJ6 251 aa15.01□□□□□ -0.01
PCCB-214ENST00000478469 TET3O43151 1660 aa15.01□□□□□ -0.01
PCCB-214ENST00000478469 HSP90AB2PQ58FF8 381 aa15.01□□□□□ -0.01
PCCB-214ENST00000478469 RIC3Q7Z5B4 369 aa15.01□□□□□ -0.01
PCCB-214ENST00000478469 ZRANB1Q9UGI0 708 aa15.01□□□□□ -0.01
PCCB-214ENST00000478469 GPATCH3Q96I76 525 aa15□□□□□ -0.01
PCCB-214ENST00000478469 THUMPD2Q9BTF0 503 aaKnown RBP15□□□□□ -0.01
PCCB-214ENST00000478469 AMOTQ4VCS5 1084 aa15□□□□□ -0.01
PCCB-214ENST00000478469 PARD3Q8TEW0 1356 aa15□□□□□ -0.01
PCCB-214ENST00000478469 NLRP1Q9C000 1473 aa15□□□□□ -0.01
PCCB-214ENST00000478469 IQGAP3Q86VI3 1631 aa14.99□□□□□ -0.01
PCCB-214ENST00000478469 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
PCCB-214ENST00000478469 TMX4Q9H1E5 349 aaPredicted RBP14.99□□□□□ -0.01
PCCB-214ENST00000478469 SLFN5Q08AF3 891 aa14.99□□□□□ -0.01
PCCB-214ENST00000478469 CHRNA2Q15822 529 aa14.99□□□□□ -0.01
PCCB-214ENST00000478469 ANKRD45Q5TZF3 282 aa14.99□□□□□ -0.01
PCCB-214ENST00000478469 POLKQ9UBT6 870 aa14.99□□□□□ -0.01
PCCB-214ENST00000478469 FGD1P98174 961 aa14.98□□□□□ -0.01
PCCB-214ENST00000478469 MCM10Q7L590 875 aa14.98□□□□□ -0.01
PCCB-214ENST00000478469 PLEKHG1Q9ULL1 1385 aa14.98□□□□□ -0.01
PCCB-214ENST00000478469 MSH5O43196 834 aa14.98□□□□□ -0.01
PCCB-214ENST00000478469 AAMPQ13685 434 aa14.98□□□□□ -0.01
PCCB-214ENST00000478469 DCTN1Q14203 1278 aa14.98□□□□□ -0.01
PCCB-214ENST00000478469 KIAA1211Q6ZU35 1233 aa14.98□□□□□ -0.01
PCCB-214ENST00000478469 BCAR3O75815 825 aa14.98□□□□□ -0.01
PCCB-214ENST00000478469 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
PCCB-214ENST00000478469 MCCP23508 829 aa14.98□□□□□ -0.01
PCCB-214ENST00000478469 ZNF428Q96B54 188 aa14.97□□□□□ -0.01
PCCB-214ENST00000478469 MYOM2P54296 1465 aa14.97□□□□□ -0.01
PCCB-214ENST00000478469 SBNO2Q9Y2G9 1366 aa14.97□□□□□ -0.01
PCCB-214ENST00000478469 TRIM6-TRIM34B2RNG4 842 aa14.97□□□□□ -0.01
PCCB-214ENST00000478469 ORAI2Q96SN7 254 aa14.97□□□□□ -0.01
PCCB-214ENST00000478469 BTBD11A6QL63 1104 aa14.96□□□□□ -0.01
PCCB-214ENST00000478469 PDE3AQ14432 1141 aa14.96□□□□□ -0.01
PCCB-214ENST00000478469 NGLY1Q96IV0 654 aa14.96□□□□□ -0.01
PCCB-214ENST00000478469 METP08581 1390 aa14.96□□□□□ -0.01
PCCB-214ENST00000478469 ANKRD24Q8TF21 1146 aa14.96□□□□□ -0.01
PCCB-214ENST00000478469 KIF1BO60333 1816 aa14.95□□□□□ -0.02
PCCB-214ENST00000478469 CROCC2H7BZ55 1655 aa14.95□□□□□ -0.02
PCCB-214ENST00000478469 DIP2BQ9P265 1576 aa14.95□□□□□ -0.02
PCCB-214ENST00000478469 UNC13BO14795 1591 aa14.95□□□□□ -0.02
PCCB-214ENST00000478469 PLEKHH1Q9ULM0 1364 aa14.95□□□□□ -0.02
PCCB-214ENST00000478469 GCP02774 474 aa14.94□□□□□ -0.02
PCCB-214ENST00000478469 POLR3AO14802 1390 aaPredicted RBP14.94□□□□□ -0.02
PCCB-214ENST00000478469 UBTFL1P0CB47 393 aaPredicted RBP14.94□□□□□ -0.02
PCCB-214ENST00000478469 NOB1Q9ULX3 412 aaKnown RBP14.94□□□□□ -0.02
PCCB-214ENST00000478469 PLEKHG3A1L390 1219 aa14.93□□□□□ -0.02
PCCB-214ENST00000478469 GNAI3P08754 354 aa14.93□□□□□ -0.02
PCCB-214ENST00000478469 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms