RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 LMOD2Q6P5Q4 547 aa11.14□□□□□ -0.63
DDX39B-218ENST00000478365 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
DDX39B-218ENST00000478365 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-218ENST00000478365 NGLY1Q96IV0 654 aa11.13□□□□□ -0.63
DDX39B-218ENST00000478365 C8orf37Q96NL8 207 aa11.13□□□□□ -0.63
DDX39B-218ENST00000478365 ABCA3Q99758 1704 aa11.12□□□□□ -0.63
DDX39B-218ENST00000478365 AFF2P51816 1311 aa11.12□□□□□ -0.63
DDX39B-218ENST00000478365 USP6P35125 1406 aa11.12□□□□□ -0.63
DDX39B-218ENST00000478365 ST20-MTHFSA0A0A6YYL1 179 aa11.12□□□□□ -0.63
DDX39B-218ENST00000478365 ADAMTS2O95450 1211 aa11.12□□□□□ -0.63
DDX39B-218ENST00000478365 TMF1P82094 1093 aa11.12□□□□□ -0.63
DDX39B-218ENST00000478365 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-218ENST00000478365 CABP1Q9NZU7 370 aa11.12□□□□□ -0.63
DDX39B-218ENST00000478365 CDK12Q9NYV4 1490 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-218ENST00000478365 TERF2IPQ9NYB0 399 aa11.11□□□□□ -0.63
DDX39B-218ENST00000478365 RGS17Q9UGC6 210 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-218ENST00000478365 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.11□□□□□ -0.63
DDX39B-218ENST00000478365 NWD2Q9ULI1 1742 aa11.11□□□□□ -0.63
DDX39B-218ENST00000478365 AKAP12Q02952 1782 aa11.11□□□□□ -0.63
DDX39B-218ENST00000478365 TTC21AQ8NDW8 1320 aa11.1□□□□□ -0.63
DDX39B-218ENST00000478365 HDGFL2Q7Z4V5 671 aaPredicted RBP11.1□□□□□ -0.63
DDX39B-218ENST00000478365 NLRP13Q86W25 1043 aa11.1□□□□□ -0.63
DDX39B-218ENST00000478365 TESK2Q96S53 571 aa11.1□□□□□ -0.63
DDX39B-218ENST00000478365 TRPC5Q9UL62 973 aaPredicted RBP11.1□□□□□ -0.63
DDX39B-218ENST00000478365 CPSF1Q10570 1443 aaKnown RBP11.09□□□□□ -0.63
DDX39B-218ENST00000478365 RXRBP28702 533 aa11.09□□□□□ -0.63
DDX39B-218ENST00000478365 RBM6P78332 1123 aaKnown RBP11.09□□□□□ -0.63
DDX39B-218ENST00000478365 ABTB2Q8N961 1025 aa11.09□□□□□ -0.63
DDX39B-218ENST00000478365 USP21Q9UK80 565 aa11.09□□□□□ -0.63
DDX39B-218ENST00000478365 MON2Q7Z3U7 1717 aa11.09□□□□□ -0.63
DDX39B-218ENST00000478365 SLIT2O94813 1529 aa11.09□□□□□ -0.63
DDX39B-218ENST00000478365 USP19O94966 1318 aa11.09□□□□□ -0.63
DDX39B-218ENST00000478365 COL14A1Q05707 1796 aaKnown RBP11.08□□□□□ -0.64
DDX39B-218ENST00000478365 KTN1Q86UP2 1357 aaKnown RBP11.08□□□□□ -0.64
DDX39B-218ENST00000478365 SOCS7O14512 581 aa11.08□□□□□ -0.64
DDX39B-218ENST00000478365 EIF4G2P78344 907 aaKnown RBP eCLIP11.08□□□□□ -0.64
DDX39B-218ENST00000478365 POTEAQ6S8J7 498 aa11.08□□□□□ -0.64
DDX39B-218ENST00000478365 ILDR2Q71H61 639 aa11.08□□□□□ -0.64
DDX39B-218ENST00000478365 CRYBG1Q9Y4K1 1723 aa11.08□□□□□ -0.64
DDX39B-218ENST00000478365 ATRNO75882 1429 aa11.08□□□□□ -0.64
DDX39B-218ENST00000478365 EDC4Q6P2E9 1401 aaKnown RBP11.08□□□□□ -0.64
DDX39B-218ENST00000478365 PHRF1Q9P1Y6 1649 aaKnown RBP11.07□□□□□ -0.64
DDX39B-218ENST00000478365 UNC5CLQ8IV45 518 aa11.07□□□□□ -0.64
DDX39B-218ENST00000478365 QTRT2Q9H974 415 aaKnown RBP11.07□□□□□ -0.64
DDX39B-218ENST00000478365 SSH2Q76I76 1423 aa11.07□□□□□ -0.64
DDX39B-218ENST00000478365 CPDO75976 1380 aa11.06□□□□□ -0.64
DDX39B-218ENST00000478365 PLCH1Q4KWH8 1693 aa11.06□□□□□ -0.64
DDX39B-218ENST00000478365 TMC1Q8TDI8 760 aa11.06□□□□□ -0.64
DDX39B-218ENST00000478365 NRKQ7Z2Y5 1582 aa11.06□□□□□ -0.64
DDX39B-218ENST00000478365 TTC21BQ7Z4L5 1316 aa11.06□□□□□ -0.64
DDX39B-218ENST00000478365 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
DDX39B-218ENST00000478365 CABLES1Q8TDN4 633 aa11.05□□□□□ -0.64
DDX39B-218ENST00000478365 PRDM11Q9NQV5 511 aa11.05□□□□□ -0.64
DDX39B-218ENST00000478365 BCL9LQ86UU0 1499 aa11.05□□□□□ -0.64
DDX39B-218ENST00000478365 USP54Q70EL1 1684 aa11.04□□□□□ -0.64
DDX39B-218ENST00000478365 ANKRD36BQ8N2N9 1353 aa11.04□□□□□ -0.64
DDX39B-218ENST00000478365 NLRP6P59044 892 aa11.04□□□□□ -0.64
DDX39B-218ENST00000478365 SLIT3O75094 1523 aa11.04□□□□□ -0.64
DDX39B-218ENST00000478365 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
DDX39B-218ENST00000478365 VPS72Q15906 364 aa11.03□□□□□ -0.64
DDX39B-218ENST00000478365 CD163L1Q9NR16 1453 aa11.03□□□□□ -0.64
DDX39B-218ENST00000478365 PIK3C2AO00443 1686 aa11.03□□□□□ -0.64
DDX39B-218ENST00000478365 ABCC6O95255 1503 aa11.03□□□□□ -0.64
DDX39B-218ENST00000478365 A0A1W2PP64 1363 aa11.03□□□□□ -0.64
DDX39B-218ENST00000478365 FAM83GA6ND36 823 aa11.02□□□□□ -0.65
DDX39B-218ENST00000478365 GCP02774 474 aa11.02□□□□□ -0.65
DDX39B-218ENST00000478365 GJD4Q96KN9 370 aaPredicted RBP11.02□□□□□ -0.65
DDX39B-218ENST00000478365 SLC12A5Q9H2X9 1139 aa11.02□□□□□ -0.65
DDX39B-218ENST00000478365 KIAA0232Q92628 1395 aa11.02□□□□□ -0.65
DDX39B-218ENST00000478365 AATKQ6ZMQ8 1374 aa11.01□□□□□ -0.65
DDX39B-218ENST00000478365 NRAPQ86VF7 1730 aa11.01□□□□□ -0.65
DDX39B-218ENST00000478365 PLEKHG5O94827 1062 aa11□□□□□ -0.65
DDX39B-218ENST00000478365 HSPA5P11021 654 aaKnown RBP11□□□□□ -0.65
DDX39B-218ENST00000478365 NUTM2GQ5VZR2 741 aa11□□□□□ -0.65
DDX39B-218ENST00000478365 BTG4Q9NY30 223 aa11□□□□□ -0.65
DDX39B-218ENST00000478365 RGS12O14924 1447 aa11□□□□□ -0.65
DDX39B-218ENST00000478365 ZC3H6P61129 1189 aaKnown RBP10.99□□□□□ -0.65
DDX39B-218ENST00000478365 CCDC9Q9Y3X0 531 aaKnown RBP10.99□□□□□ -0.65
DDX39B-218ENST00000478365 LMO7Q8WWI1 1683 aa10.98□□□□□ -0.65
DDX39B-218ENST00000478365 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
DDX39B-218ENST00000478365 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.98□□□□□ -0.65
DDX39B-218ENST00000478365 EVA1CP58658 441 aa10.97□□□□□ -0.65
DDX39B-218ENST00000478365 COG3Q96JB2 828 aa10.97□□□□□ -0.65
DDX39B-218ENST00000478365 SPATA31A5Q5VU36 1347 aa10.97□□□□□ -0.65
DDX39B-218ENST00000478365 SPATA31A7Q8IWB4 1347 aa10.97□□□□□ -0.65
DDX39B-218ENST00000478365 OVOS2A0A0J9YW53 1432 aa10.97□□□□□ -0.65
DDX39B-218ENST00000478365 OVOS2Q6IE36 1432 aa10.97□□□□□ -0.65
DDX39B-218ENST00000478365 NFAT5O94916 1531 aa10.97□□□□□ -0.65
DDX39B-218ENST00000478365 GLI3P10071 1580 aa10.97□□□□□ -0.65
DDX39B-218ENST00000478365 MYOM1P52179 1685 aa10.97□□□□□ -0.65
DDX39B-218ENST00000478365 ONECUT3O60422 494 aaPredicted RBP10.96□□□□□ -0.65
DDX39B-218ENST00000478365 ARHGEF25Q86VW2 580 aa10.96□□□□□ -0.65
DDX39B-218ENST00000478365 THRAP3Q9Y2W1 955 aaKnown RBP10.96□□□□□ -0.65
DDX39B-218ENST00000478365 CGNL1Q0VF96 1302 aa10.95□□□□□ -0.66
DDX39B-218ENST00000478365 CHRNA2Q15822 529 aa10.95□□□□□ -0.66
DDX39B-218ENST00000478365 NME9Q86XW9 330 aa10.95□□□□□ -0.66
DDX39B-218ENST00000478365 KIF20BQ96Q89 1820 aa10.95□□□□□ -0.66
DDX39B-218ENST00000478365 CAMTA1Q9Y6Y1 1673 aa10.95□□□□□ -0.66
DDX39B-218ENST00000478365 COL5A2P05997 1499 aaPredicted RBP10.94□□□□□ -0.66
DDX39B-218ENST00000478365 CRB1P82279 1406 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms