RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 TSR2Q969E8 191 aaKnown RBP11.53□□□□□ -0.56
CDHR3-211ENST00000478080 POLKQ9UBT6 870 aa11.53□□□□□ -0.56
CDHR3-211ENST00000478080 UBR1Q8IWV7 1749 aa11.53□□□□□ -0.56
CDHR3-211ENST00000478080 CANXP27824 592 aaKnown RBP11.53□□□□□ -0.56
CDHR3-211ENST00000478080 HDGFP51858 240 aaKnown RBP11.53□□□□□ -0.56
CDHR3-211ENST00000478080 RARSP54136 660 aaKnown RBP11.53□□□□□ -0.56
CDHR3-211ENST00000478080 CCDC27Q2M243 656 aa11.53□□□□□ -0.56
CDHR3-211ENST00000478080 SLC26A8Q96RN1 970 aa11.53□□□□□ -0.56
CDHR3-211ENST00000478080 MED14O60244 1454 aa11.53□□□□□ -0.56
CDHR3-211ENST00000478080 KIF20BQ96Q89 1820 aa11.52□□□□□ -0.56
CDHR3-211ENST00000478080 PDE4AP27815 886 aa11.52□□□□□ -0.57
CDHR3-211ENST00000478080 TMPOP42166 694 aaKnown RBP11.52□□□□□ -0.57
CDHR3-211ENST00000478080 COG6Q9Y2V7 657 aa11.52□□□□□ -0.57
CDHR3-211ENST00000478080 ROBO2Q9HCK4 1378 aa11.52□□□□□ -0.57
CDHR3-211ENST00000478080 TRIM35Q9UPQ4 493 aa11.52□□□□□ -0.57
CDHR3-211ENST00000478080 EMILIN1Q9Y6C2 1016 aa11.52□□□□□ -0.57
CDHR3-211ENST00000478080 PRR36Q9H6K5 1346 aa11.51□□□□□ -0.57
CDHR3-211ENST00000478080 ATP7BP35670 1465 aa11.51□□□□□ -0.57
CDHR3-211ENST00000478080 ADAMTS13Q76LX8 1427 aa11.51□□□□□ -0.57
CDHR3-211ENST00000478080 MAPK8IP3Q9UPT6 1336 aa11.51□□□□□ -0.57
CDHR3-211ENST00000478080 NPM2Q86SE8 214 aaKnown RBP11.51□□□□□ -0.57
CDHR3-211ENST00000478080 ADGRB2O60241 1585 aa11.51□□□□□ -0.57
CDHR3-211ENST00000478080 CPSF1Q10570 1443 aaKnown RBP11.5□□□□□ -0.57
CDHR3-211ENST00000478080 PNPLA6Q8IY17 1366 aa11.5□□□□□ -0.57
CDHR3-211ENST00000478080 HMOX1P09601 288 aa11.5□□□□□ -0.57
CDHR3-211ENST00000478080 RLBP1P12271 317 aa11.5□□□□□ -0.57
CDHR3-211ENST00000478080 RIPK4P57078 832 aa11.5□□□□□ -0.57
CDHR3-211ENST00000478080 CENPQQ7L2Z9 268 aaPredicted RBP11.5□□□□□ -0.57
CDHR3-211ENST00000478080 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
CDHR3-211ENST00000478080 IGHDP01880 384 aa11.49□□□□□ -0.57
CDHR3-211ENST00000478080 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
CDHR3-211ENST00000478080 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
CDHR3-211ENST00000478080 CPS1P31327 1500 aa11.49□□□□□ -0.57
CDHR3-211ENST00000478080 RRS1Q15050 365 aaKnown RBP11.49□□□□□ -0.57
CDHR3-211ENST00000478080 MYH16Q9H6N6 1097 aa11.49□□□□□ -0.57
CDHR3-211ENST00000478080 MAP2P11137 1827 aaKnown RBP11.49□□□□□ -0.57
CDHR3-211ENST00000478080 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
CDHR3-211ENST00000478080 ERICH6Q7L0X2 663 aa11.48□□□□□ -0.57
CDHR3-211ENST00000478080 TECPR2O15040 1411 aa11.48□□□□□ -0.57
CDHR3-211ENST00000478080 FAM135BQ49AJ0 1406 aa11.48□□□□□ -0.57
CDHR3-211ENST00000478080 PRKAR2BP31323 418 aa11.48□□□□□ -0.57
CDHR3-211ENST00000478080 EXOSC9Q06265 439 aaKnown RBP11.48□□□□□ -0.57
CDHR3-211ENST00000478080 PDE3AQ14432 1141 aa11.48□□□□□ -0.57
CDHR3-211ENST00000478080 EDC4Q6P2E9 1401 aaKnown RBP11.47□□□□□ -0.57
CDHR3-211ENST00000478080 MS4A1P11836 297 aa11.47□□□□□ -0.57
CDHR3-211ENST00000478080 SIRT1Q96EB6 747 aa11.47□□□□□ -0.57
CDHR3-211ENST00000478080 PHACTR3Q96KR7 559 aa11.47□□□□□ -0.57
CDHR3-211ENST00000478080 ANP32AP39687 249 aaKnown RBP11.47□□□□□ -0.57
CDHR3-211ENST00000478080 RGS3P49796 1198 aa11.47□□□□□ -0.57
CDHR3-211ENST00000478080 NBR1Q14596 966 aa11.47□□□□□ -0.57
CDHR3-211ENST00000478080 RSPH6AQ9H0K4 717 aa11.47□□□□□ -0.57
CDHR3-211ENST00000478080 KNDC1Q76NI1 1749 aa11.47□□□□□ -0.57
CDHR3-211ENST00000478080 PTPRUQ92729 1446 aa11.46□□□□□ -0.57
CDHR3-211ENST00000478080 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.46□□□□□ -0.57
CDHR3-211ENST00000478080 COG3Q96JB2 828 aa11.46□□□□□ -0.58
CDHR3-211ENST00000478080 PLEKHG1Q9ULL1 1385 aa11.46□□□□□ -0.58
CDHR3-211ENST00000478080 CDC42BPGQ6DT37 1551 aa11.45□□□□□ -0.58
CDHR3-211ENST00000478080 FCHSD2O94868 740 aa11.45□□□□□ -0.58
CDHR3-211ENST00000478080 THUMPD2Q9BTF0 503 aaKnown RBP11.45□□□□□ -0.58
CDHR3-211ENST00000478080 LRRC7Q96NW7 1537 aa11.45□□□□□ -0.58
CDHR3-211ENST00000478080 C3P01024 1663 aa11.45□□□□□ -0.58
CDHR3-211ENST00000478080 IL13P35225 146 aa11.45□□□□□ -0.58
CDHR3-211ENST00000478080 NCBP3Q53F19 620 aaKnown RBP11.45□□□□□ -0.58
CDHR3-211ENST00000478080 EID1Q9Y6B2 187 aa11.45□□□□□ -0.58
CDHR3-211ENST00000478080 IPO9Q96P70 1041 aaKnown RBP11.44□□□□□ -0.58
CDHR3-211ENST00000478080 BCL11AQ9H165 835 aa11.44□□□□□ -0.58
CDHR3-211ENST00000478080 AMOTL2Q9Y2J4 779 aa11.44□□□□□ -0.58
CDHR3-211ENST00000478080 LAS1LQ9Y4W2 734 aaKnown RBP11.44□□□□□ -0.58
CDHR3-211ENST00000478080 ACEP12821 1306 aa11.44□□□□□ -0.58
CDHR3-211ENST00000478080 NOP58Q9Y2X3 529 aaKnown RBP11.44□□□□□ -0.58
CDHR3-211ENST00000478080 SOX12O15370 315 aa11.43□□□□□ -0.58
CDHR3-211ENST00000478080 PMFBP1Q8TBY8 1022 aa11.43□□□□□ -0.58
CDHR3-211ENST00000478080 SSH1Q8WYL5 1049 aa11.43□□□□□ -0.58
CDHR3-211ENST00000478080 SMC4Q9NTJ3 1288 aa11.43□□□□□ -0.58
CDHR3-211ENST00000478080 PCDHB15Q9Y5E8 787 aa11.43□□□□□ -0.58
CDHR3-211ENST00000478080 MON2Q7Z3U7 1717 aa11.43□□□□□ -0.58
CDHR3-211ENST00000478080 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
CDHR3-211ENST00000478080 PNNQ9H307 717 aaKnown RBP11.42□□□□□ -0.58
CDHR3-211ENST00000478080 AKAP12Q02952 1782 aa11.42□□□□□ -0.58
CDHR3-211ENST00000478080 TTC21BQ7Z4L5 1316 aa11.41□□□□□ -0.58
CDHR3-211ENST00000478080 ITSN1Q15811 1721 aa11.41□□□□□ -0.58
CDHR3-211ENST00000478080 FER1L4A9Z1Z3 1794 aa11.41□□□□□ -0.58
CDHR3-211ENST00000478080 NEFMP07197 916 aa11.4□□□□□ -0.58
CDHR3-211ENST00000478080 NFE2L2Q16236 605 aa11.4□□□□□ -0.58
CDHR3-211ENST00000478080 ZKSCAN2Q63HK3 967 aa11.4□□□□□ -0.58
CDHR3-211ENST00000478080 AATKQ6ZMQ8 1374 aa11.4□□□□□ -0.58
CDHR3-211ENST00000478080 TRIM27P14373 513 aa11.4□□□□□ -0.58
CDHR3-211ENST00000478080 NOB1Q9ULX3 412 aaKnown RBP11.4□□□□□ -0.58
CDHR3-211ENST00000478080 IL16Q14005 1332 aa11.4□□□□□ -0.58
CDHR3-211ENST00000478080 FAM83GA6ND36 823 aa11.39□□□□□ -0.59
CDHR3-211ENST00000478080 C8orf34Q49A92 452 aa11.39□□□□□ -0.59
CDHR3-211ENST00000478080 AEBP1Q8IUX7 1158 aa11.39□□□□□ -0.59
CDHR3-211ENST00000478080 FTSJ3Q8IY81 847 aaKnown RBP11.39□□□□□ -0.59
CDHR3-211ENST00000478080 DZIP1LQ8IYY4 767 aaKnown RBP11.39□□□□□ -0.59
CDHR3-211ENST00000478080 THEMISQ8N1K5 641 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-211ENST00000478080 CDK12Q9NYV4 1490 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-211ENST00000478080 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-211ENST00000478080 PLEKHG3A1L390 1219 aa11.39□□□□□ -0.59
CDHR3-211ENST00000478080 DCTN1Q14203 1278 aa11.39□□□□□ -0.59
CDHR3-211ENST00000478080 MVPQ14764 893 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms