RNA–Protein interactions for RNA: ENST00000477772.1

COL11A2-206, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 2

Gene COL11A2, Length 1,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-206ENST00000477772 TERF2IPQ9NYB0 399 aa21.95■■□□□ 1.1
COL11A2-206ENST00000477772 AHDC1Q5TGY3 1603 aaPredicted RBP21.95■■□□□ 1.1
COL11A2-206ENST00000477772 PXDNQ92626 1479 aa21.95■■□□□ 1.1
COL11A2-206ENST00000477772 NPHP3Q7Z494 1330 aa21.95■■□□□ 1.1
COL11A2-206ENST00000477772 PSME1Q06323 249 aa21.94■■□□□ 1.1
COL11A2-206ENST00000477772 CARD14Q9BXL6 1004 aa21.94■■□□□ 1.1
COL11A2-206ENST00000477772 KTN1Q86UP2 1357 aaKnown RBP21.94■■□□□ 1.1
COL11A2-206ENST00000477772 USP6P35125 1406 aa21.94■■□□□ 1.1
COL11A2-206ENST00000477772 ZNF692Q9BU19 519 aaPredicted RBP21.94■■□□□ 1.1
COL11A2-206ENST00000477772 KRT28Q7Z3Y7 464 aa21.93■■□□□ 1.1
COL11A2-206ENST00000477772 HDGFL2Q7Z4V5 671 aaPredicted RBP21.93■■□□□ 1.1
COL11A2-206ENST00000477772 SSH2Q76I76 1423 aa21.93■■□□□ 1.1
COL11A2-206ENST00000477772 SOS2Q07890 1332 aaPredicted RBP21.92■■□□□ 1.1
COL11A2-206ENST00000477772 TRPM3Q9HCF6 1732 aaPredicted RBP21.92■■□□□ 1.1
COL11A2-206ENST00000477772 NRKQ7Z2Y5 1582 aa21.92■■□□□ 1.1
COL11A2-206ENST00000477772 PHLPP1O60346 1717 aa21.91■■□□□ 1.1
COL11A2-206ENST00000477772 COL16A1Q07092 1604 aaPredicted RBP21.89■■□□□ 1.09
COL11A2-206ENST00000477772 PER1O15534 1290 aaPredicted RBP21.88■■□□□ 1.09
COL11A2-206ENST00000477772 EDC4Q6P2E9 1401 aaKnown RBP21.87■■□□□ 1.09
COL11A2-206ENST00000477772 NSD3Q9BZ95 1437 aa21.87■■□□□ 1.09
COL11A2-206ENST00000477772 TTC21BQ7Z4L5 1316 aa21.87■■□□□ 1.09
COL11A2-206ENST00000477772 FBXO41Q8TF61 875 aa21.87■■□□□ 1.09
COL11A2-206ENST00000477772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.86■■□□□ 1.09
COL11A2-206ENST00000477772 ALS2Q96Q42 1657 aa21.85■■□□□ 1.09
COL11A2-206ENST00000477772 PAK3O75914 559 aaPredicted RBP21.85■■□□□ 1.09
COL11A2-206ENST00000477772 MRS2Q9HD23 443 aa21.85■■□□□ 1.09
COL11A2-206ENST00000477772 TSHZ2Q9NRE2 1034 aa21.85■■□□□ 1.09
COL11A2-206ENST00000477772 SBNO1A3KN83 1393 aa21.85■■□□□ 1.09
COL11A2-206ENST00000477772 HSPA1LP34931 641 aa21.85■■□□□ 1.09
COL11A2-206ENST00000477772 BRD4O60885 1362 aaPredicted RBP21.84■■□□□ 1.09
COL11A2-206ENST00000477772 SPATA31A3Q5VYP0 1347 aa21.84■■□□□ 1.09
COL11A2-206ENST00000477772 PIK3C2AO00443 1686 aa21.84■■□□□ 1.09
COL11A2-206ENST00000477772 TNS3Q68CZ2 1445 aa21.83■■□□□ 1.08
COL11A2-206ENST00000477772 CCDC184Q52MB2 194 aa21.82■■□□□ 1.08
COL11A2-206ENST00000477772 NCBP3Q53F19 620 aaKnown RBP21.82■■□□□ 1.08
COL11A2-206ENST00000477772 ZBED9Q6R2W3 1325 aa21.82■■□□□ 1.08
COL11A2-206ENST00000477772 ERICH6BQ5W0A0 696 aa21.81■■□□□ 1.08
COL11A2-206ENST00000477772 NME9Q86XW9 330 aa21.81■■□□□ 1.08
COL11A2-206ENST00000477772 TTC21AQ8NDW8 1320 aa21.81■■□□□ 1.08
COL11A2-206ENST00000477772 MYT1Q01538 1121 aa21.81■■□□□ 1.08
COL11A2-206ENST00000477772 LRRC59Q96AG4 307 aaKnown RBP21.81■■□□□ 1.08
COL11A2-206ENST00000477772 ZRANB1Q9UGI0 708 aa21.81■■□□□ 1.08
COL11A2-206ENST00000477772 FYB1O15117 783 aa21.8■■□□□ 1.08
COL11A2-206ENST00000477772 ABTB2Q8N961 1025 aa21.8■■□□□ 1.08
COL11A2-206ENST00000477772 KNSTRNQ9Y448 316 aa21.8■■□□□ 1.08
COL11A2-206ENST00000477772 NUTM2GQ5VZR2 741 aa21.79■■□□□ 1.08
COL11A2-206ENST00000477772 LMOD2Q6P5Q4 547 aa21.79■■□□□ 1.08
COL11A2-206ENST00000477772 KIF20BQ96Q89 1820 aa21.79■■□□□ 1.08
COL11A2-206ENST00000477772 MARF1Q9Y4F3 1742 aaKnown RBP21.79■■□□□ 1.08
COL11A2-206ENST00000477772 CGNL1Q0VF96 1302 aa21.77■■□□□ 1.08
COL11A2-206ENST00000477772 GGNBP2Q9H3C7 697 aa21.76■■□□□ 1.07
COL11A2-206ENST00000477772 ARHGEF10O15013 1369 aa21.76■■□□□ 1.07
COL11A2-206ENST00000477772 PNPLA6Q8IY17 1366 aa21.75■■□□□ 1.07
COL11A2-206ENST00000477772 NLRP6P59044 892 aa21.75■■□□□ 1.07
COL11A2-206ENST00000477772 FAM9BQ8IZU0 186 aa21.75■■□□□ 1.07
COL11A2-206ENST00000477772 USP31Q70CQ4 1352 aa21.75■■□□□ 1.07
COL11A2-206ENST00000477772 USP54Q70EL1 1684 aa21.74■■□□□ 1.07
COL11A2-206ENST00000477772 MED1Q15648 1581 aaPredicted RBP21.74■■□□□ 1.07
COL11A2-206ENST00000477772 OVOS2A0A0J9YW53 1432 aa21.74■■□□□ 1.07
COL11A2-206ENST00000477772 OVOS2Q6IE36 1432 aa21.74■■□□□ 1.07
COL11A2-206ENST00000477772 CRYBG1Q9Y4K1 1723 aa21.73■■□□□ 1.07
COL11A2-206ENST00000477772 PLEKHG5O94827 1062 aa21.73■■□□□ 1.07
COL11A2-206ENST00000477772 SHPRHQ149N8 1683 aa21.73■■□□□ 1.07
COL11A2-206ENST00000477772 COL22A1Q8NFW1 1626 aaPredicted RBP21.73■■□□□ 1.07
COL11A2-206ENST00000477772 CABLES1Q8TDN4 633 aa21.72■■□□□ 1.07
COL11A2-206ENST00000477772 ANKRD26Q9UPS8 1709 aa21.72■■□□□ 1.07
COL11A2-206ENST00000477772 CNGB1Q14028 1251 aaPredicted RBP21.72■■□□□ 1.07
COL11A2-206ENST00000477772 CC2D1BQ5T0F9 858 aaKnown RBP21.72■■□□□ 1.07
COL11A2-206ENST00000477772 JCADQ9P266 1359 aa21.71■■□□□ 1.07
COL11A2-206ENST00000477772 NLRP13Q86W25 1043 aa21.71■■□□□ 1.07
COL11A2-206ENST00000477772 NPC1L1Q9UHC9 1359 aa21.71■■□□□ 1.07
COL11A2-206ENST00000477772 USP19O94966 1318 aa21.71■■□□□ 1.07
COL11A2-206ENST00000477772 ABCA3Q99758 1704 aa21.7■■□□□ 1.06
COL11A2-206ENST00000477772 NSD2O96028 1365 aa21.69■■□□□ 1.06
COL11A2-206ENST00000477772 COG3Q96JB2 828 aa21.69■■□□□ 1.06
COL11A2-206ENST00000477772 PHRF1Q9P1Y6 1649 aaKnown RBP21.69■■□□□ 1.06
COL11A2-206ENST00000477772 SLIT3O75094 1523 aa21.68■■□□□ 1.06
COL11A2-206ENST00000477772 FBLN1P23142 703 aa21.67■■□□□ 1.06
COL11A2-206ENST00000477772 GCP02774 474 aa21.66■■□□□ 1.06
COL11A2-206ENST00000477772 SOX12O15370 315 aa21.65■■□□□ 1.06
COL11A2-206ENST00000477772 RALBP1Q15311 655 aa21.65■■□□□ 1.06
COL11A2-206ENST00000477772 ILDR1Q86SU0 546 aaPredicted RBP21.65■■□□□ 1.06
COL11A2-206ENST00000477772 NFAT5O94916 1531 aa21.64■■□□□ 1.06
COL11A2-206ENST00000477772 MORC1Q86VD1 984 aa21.64■■□□□ 1.05
COL11A2-206ENST00000477772 TNNT2P45379 298 aaPredicted RBP21.63■■□□□ 1.05
COL11A2-206ENST00000477772 SMG6Q86US8 1419 aaKnown RBP21.63■■□□□ 1.05
COL11A2-206ENST00000477772 NUTM2BA6NNL0 878 aaPredicted RBP21.61■■□□□ 1.05
COL11A2-206ENST00000477772 NUTM2EB1AL46 878 aaPredicted RBP21.61■■□□□ 1.05
COL11A2-206ENST00000477772 NUTM2AQ8IVF1 878 aaPredicted RBP21.61■■□□□ 1.05
COL11A2-206ENST00000477772 SPATA31A6Q5VVP1 1343 aa21.61■■□□□ 1.05
COL11A2-206ENST00000477772 KCNH5Q8NCM2 988 aa21.61■■□□□ 1.05
COL11A2-206ENST00000477772 PARD3Q8TEW0 1356 aa21.6■■□□□ 1.05
COL11A2-206ENST00000477772 LRP6O75581 1613 aa21.6■■□□□ 1.05
COL11A2-206ENST00000477772 ADRA2BP18089 450 aa21.6■■□□□ 1.05
COL11A2-206ENST00000477772 ZC3H6P61129 1189 aaKnown RBP21.6■■□□□ 1.05
COL11A2-206ENST00000477772 MAP2P11137 1827 aaKnown RBP21.6■■□□□ 1.05
COL11A2-206ENST00000477772 MYBBP1AQ9BQG0 1328 aaKnown RBP21.59■■□□□ 1.05
COL11A2-206ENST00000477772 HAP1P54257 671 aaPredicted RBP21.59■■□□□ 1.05
COL11A2-206ENST00000477772 PPP4R2Q9NY27 417 aa21.59■■□□□ 1.05
COL11A2-206ENST00000477772 LTN1O94822 1766 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms