RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 KCNH2Q12809 1159 aa8.43□□□□□ -1.06
XRN1-211ENST00000477237 FDX1P10109 184 aa8.42□□□□□ -1.06
XRN1-211ENST00000477237 NUTM1Q86Y26 1132 aa8.42□□□□□ -1.06
XRN1-211ENST00000477237 ZFAND3Q9H8U3 227 aa8.42□□□□□ -1.06
XRN1-211ENST00000477237 FAM217BQ9NTX9 383 aaPredicted RBP8.42□□□□□ -1.06
XRN1-211ENST00000477237 KRT76Q01546 638 aa8.41□□□□□ -1.06
XRN1-211ENST00000477237 C6orf118Q5T5N4 469 aa8.41□□□□□ -1.06
XRN1-211ENST00000477237 ADAMTS8Q9UP79 889 aa8.4□□□□□ -1.06
XRN1-211ENST00000477237 ZIC2O95409 532 aaPredicted RBP8.39□□□□□ -1.07
XRN1-211ENST00000477237 GPR161Q8N6U8 529 aaKnown RBP8.39□□□□□ -1.07
XRN1-211ENST00000477237 ITPKCQ96DU7 683 aa8.39□□□□□ -1.07
XRN1-211ENST00000477237 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
XRN1-211ENST00000477237 MINK1Q8N4C8 1332 aaPredicted RBP8.37□□□□□ -1.07
XRN1-211ENST00000477237 PRR7Q8TB68 274 aa8.37□□□□□ -1.07
XRN1-211ENST00000477237 FAM174AQ8TBP5 190 aa8.37□□□□□ -1.07
XRN1-211ENST00000477237 CDK15Q96Q40 435 aa8.37□□□□□ -1.07
XRN1-211ENST00000477237 NR3C2P08235 984 aa8.36□□□□□ -1.07
XRN1-211ENST00000477237 CLCN1P35523 988 aa8.36□□□□□ -1.07
XRN1-211ENST00000477237 CCDC102AQ96A19 550 aa8.36□□□□□ -1.07
XRN1-211ENST00000477237 CNTNAP3BQ96NU0 1288 aa8.36□□□□□ -1.07
XRN1-211ENST00000477237 CNTNAP3Q9BZ76 1288 aa8.36□□□□□ -1.07
XRN1-211ENST00000477237 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
XRN1-211ENST00000477237 NDUFV2P19404 249 aa8.35□□□□□ -1.07
XRN1-211ENST00000477237 ARID5BQ14865 1188 aa8.35□□□□□ -1.07
XRN1-211ENST00000477237 FOXJ1Q92949 421 aa8.35□□□□□ -1.07
XRN1-211ENST00000477237 DNMT3LQ9UJW3 386 aa8.35□□□□□ -1.07
XRN1-211ENST00000477237 SOS2Q07890 1332 aaPredicted RBP8.34□□□□□ -1.07
XRN1-211ENST00000477237 BMP2P12643 396 aa8.34□□□□□ -1.07
XRN1-211ENST00000477237 LINC00528Q8N1L1 170 aa8.34□□□□□ -1.07
XRN1-211ENST00000477237 DESI1Q6ICB0 168 aa8.33□□□□□ -1.08
XRN1-211ENST00000477237 SPIRE2Q8WWL2 714 aa8.33□□□□□ -1.08
XRN1-211ENST00000477237 MOXD2PA6NHM9 499 aa8.32□□□□□ -1.08
XRN1-211ENST00000477237 GRM5P41594 1212 aa8.32□□□□□ -1.08
XRN1-211ENST00000477237 NR5A1Q13285 461 aa8.32□□□□□ -1.08
XRN1-211ENST00000477237 ZNF385CQ66K41 422 aaPredicted RBP8.32□□□□□ -1.08
XRN1-211ENST00000477237 GPAT2Q6NUI2 795 aa8.32□□□□□ -1.08
XRN1-211ENST00000477237 MEIOBQ8N635 442 aa8.32□□□□□ -1.08
XRN1-211ENST00000477237 UPP2O95045 317 aa8.31□□□□□ -1.08
XRN1-211ENST00000477237 CTHP32929 405 aa8.31□□□□□ -1.08
XRN1-211ENST00000477237 COL25A1Q9BXS0 654 aaPredicted RBP8.31□□□□□ -1.08
XRN1-211ENST00000477237 MTMR2Q13614 643 aa8.3□□□□□ -1.08
XRN1-211ENST00000477237 C4orf48Q5BLP8 95 aa8.3□□□□□ -1.08
XRN1-211ENST00000477237 IRS1P35568 1242 aa8.29□□□□□ -1.08
XRN1-211ENST00000477237 RNFT1Q5M7Z0 435 aa8.29□□□□□ -1.08
XRN1-211ENST00000477237 LYPD8Q6UX82 237 aa8.29□□□□□ -1.08
XRN1-211ENST00000477237 WHAMMQ8TF30 809 aa8.29□□□□□ -1.08
XRN1-211ENST00000477237 DNMT3AQ9Y6K1 912 aaPredicted RBP8.29□□□□□ -1.08
XRN1-211ENST00000477237 SVOPQ8N4V2 548 aa8.28□□□□□ -1.08
XRN1-211ENST00000477237 KRI1Q8N9T8 703 aaKnown RBP8.28□□□□□ -1.08
XRN1-211ENST00000477237 MAP10Q9P2G4 905 aa8.28□□□□□ -1.08
XRN1-211ENST00000477237 SPDYE5A6NIY4 337 aa8.27□□□□□ -1.09
XRN1-211ENST00000477237 SSTR3P32745 418 aaPredicted RBP8.27□□□□□ -1.09
XRN1-211ENST00000477237 PTSQ03393 145 aa8.27□□□□□ -1.09
XRN1-211ENST00000477237 SPTLC1O15269 473 aa8.26□□□□□ -1.09
XRN1-211ENST00000477237 ARHGEF15O94989 841 aa8.26□□□□□ -1.09
XRN1-211ENST00000477237 IGHA1P01876 353 aa8.26□□□□□ -1.09
XRN1-211ENST00000477237 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.26□□□□□ -1.09
XRN1-211ENST00000477237 NANOS1Q8WY41 292 aaKnown RBP8.26□□□□□ -1.09
XRN1-211ENST00000477237 F12P00748 615 aaPredicted RBP8.25□□□□□ -1.09
XRN1-211ENST00000477237 AGERQ15109 404 aa8.25□□□□□ -1.09
XRN1-211ENST00000477237 FIGNL2A6NMB9 653 aa8.24□□□□□ -1.09
XRN1-211ENST00000477237 TTLL8A6PVC2 850 aa8.24□□□□□ -1.09
XRN1-211ENST00000477237 SLURP2P0DP57 97 aa8.24□□□□□ -1.09
XRN1-211ENST00000477237 XP32Q5T750 250 aa8.24□□□□□ -1.09
XRN1-211ENST00000477237 TSEN34Q9BSV6 310 aaKnown RBP8.24□□□□□ -1.09
XRN1-211ENST00000477237 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
XRN1-211ENST00000477237 CCDC155Q8N6L0 562 aa8.23□□□□□ -1.09
XRN1-211ENST00000477237 FSHRP23945 695 aa8.22□□□□□ -1.09
XRN1-211ENST00000477237 BPHLQ86WA6 291 aaPredicted RBP8.22□□□□□ -1.09
XRN1-211ENST00000477237 FOXK2Q01167 660 aa8.21□□□□□ -1.1
XRN1-211ENST00000477237 KANK3Q6NY19 840 aa8.21□□□□□ -1.1
XRN1-211ENST00000477237 PCDHB15Q9Y5E8 787 aa8.21□□□□□ -1.1
XRN1-211ENST00000477237 MARSP56192 900 aaKnown RBP8.2□□□□□ -1.1
XRN1-211ENST00000477237 VWA5B2Q8N398 1253 aa8.2□□□□□ -1.1
XRN1-211ENST00000477237 C1QTNF2Q9BXJ5 285 aa8.2□□□□□ -1.1
XRN1-211ENST00000477237 SLC35F4A4IF30 521 aa8.19□□□□□ -1.1
XRN1-211ENST00000477237 PER1O15534 1290 aaPredicted RBP8.18□□□□□ -1.1
XRN1-211ENST00000477237 RSBN1LQ6PCB5 846 aaPredicted RBP8.18□□□□□ -1.1
XRN1-211ENST00000477237 VASH1Q7L8A9 365 aaPredicted RBP8.18□□□□□ -1.1
XRN1-211ENST00000477237 MAP4K5Q9Y4K4 846 aa8.18□□□□□ -1.1
XRN1-211ENST00000477237 EMILIN1Q9Y6C2 1016 aa8.18□□□□□ -1.1
XRN1-211ENST00000477237 ITGA6P23229 1130 aa8.17□□□□□ -1.1
XRN1-211ENST00000477237 HRCP23327 699 aa8.17□□□□□ -1.1
XRN1-211ENST00000477237 GJA5P36382 358 aa8.17□□□□□ -1.1
XRN1-211ENST00000477237 SH3RF1Q7Z6J0 888 aa8.17□□□□□ -1.1
XRN1-211ENST00000477237 CCDC116Q8IYX3 515 aa8.17□□□□□ -1.1
XRN1-211ENST00000477237 SCARF2Q96GP6 870 aaPredicted RBP8.17□□□□□ -1.1
XRN1-211ENST00000477237 CDC14CA4D256 554 aa8.16□□□□□ -1.1
XRN1-211ENST00000477237 SPINT1O43278 529 aa8.16□□□□□ -1.1
XRN1-211ENST00000477237 CBLBQ13191 982 aa8.16□□□□□ -1.1
XRN1-211ENST00000477237 SV2AQ7L0J3 742 aa8.16□□□□□ -1.1
XRN1-211ENST00000477237 TBC1D2Q9BYX2 928 aa8.16□□□□□ -1.1
XRN1-211ENST00000477237 LYPD4Q6UWN0 246 aa8.15□□□□□ -1.1
XRN1-211ENST00000477237 TRMT44Q8IYL2 757 aaKnown RBP8.15□□□□□ -1.1
XRN1-211ENST00000477237 BEGAINQ9BUH8 593 aa8.15□□□□□ -1.1
XRN1-211ENST00000477237 TULP1O00294 542 aaPredicted RBP8.14□□□□□ -1.11
XRN1-211ENST00000477237 ADAM23O75077 832 aa8.14□□□□□ -1.11
XRN1-211ENST00000477237 ADAMTS2O95450 1211 aa8.14□□□□□ -1.11
XRN1-211ENST00000477237 TTLL12Q14166 644 aaPredicted RBP8.14□□□□□ -1.11
XRN1-211ENST00000477237 GIGYF2Q6Y7W6 1299 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms