RNA–Protein interactions for RNA: ENST00000477049.1

SETX-205, Transcript of senataxin, humanhuman

TSL 3

Gene SETX, Length 4,067 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-205ENST00000477049 TERF2IPQ9NYB0 399 aa9.33□□□□□ -0.92
SETX-205ENST00000477049 DIP2BQ9P265 1576 aa9.33□□□□□ -0.92
SETX-205ENST00000477049 FBLN1P23142 703 aa9.33□□□□□ -0.92
SETX-205ENST00000477049 WAPLQ7Z5K2 1190 aa9.33□□□□□ -0.92
SETX-205ENST00000477049 PCDHB15Q9Y5E8 787 aa9.33□□□□□ -0.92
SETX-205ENST00000477049 FTSJ3Q8IY81 847 aaKnown RBP9.33□□□□□ -0.92
SETX-205ENST00000477049 TRIM35Q9UPQ4 493 aa9.33□□□□□ -0.92
SETX-205ENST00000477049 MLECQ14165 292 aa9.32□□□□□ -0.92
SETX-205ENST00000477049 TMPOP42166 694 aaKnown RBP9.32□□□□□ -0.92
SETX-205ENST00000477049 MYH16Q9H6N6 1097 aa9.32□□□□□ -0.92
SETX-205ENST00000477049 A2ML1A8K2U0 1454 aa9.31□□□□□ -0.92
SETX-205ENST00000477049 ESF1Q9H501 851 aaKnown RBP9.31□□□□□ -0.92
SETX-205ENST00000477049 RTN4Q9NQC3 1192 aaKnown RBP9.31□□□□□ -0.92
SETX-205ENST00000477049 ANKRD26Q9UPS8 1709 aa9.31□□□□□ -0.92
SETX-205ENST00000477049 RIMBP3CA6NJZ7 1639 aa9.31□□□□□ -0.92
SETX-205ENST00000477049 RIMBP3BA6NNM3 1639 aa9.31□□□□□ -0.92
SETX-205ENST00000477049 RIMBP3Q9UFD9 1639 aa9.31□□□□□ -0.92
SETX-205ENST00000477049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.31□□□□□ -0.92
SETX-205ENST00000477049 MED14O60244 1454 aa9.31□□□□□ -0.92
SETX-205ENST00000477049 EXOSC9Q06265 439 aaKnown RBP9.31□□□□□ -0.92
SETX-205ENST00000477049 NCBP3Q53F19 620 aaKnown RBP9.31□□□□□ -0.92
SETX-205ENST00000477049 HDGFL2Q7Z4V5 671 aaPredicted RBP9.31□□□□□ -0.92
SETX-205ENST00000477049 RIMS2Q9UQ26 1411 aa9.3□□□□□ -0.92
SETX-205ENST00000477049 SEC24BO95487 1268 aa9.3□□□□□ -0.92
SETX-205ENST00000477049 MAPK8IP3Q9UPT6 1336 aa9.29□□□□□ -0.92
SETX-205ENST00000477049 PNPLA6Q8IY17 1366 aa9.29□□□□□ -0.92
SETX-205ENST00000477049 DIAPH1O60610 1272 aaKnown RBP9.29□□□□□ -0.92
SETX-205ENST00000477049 AGLP35573 1532 aa9.29□□□□□ -0.92
SETX-205ENST00000477049 USP19O94966 1318 aa9.29□□□□□ -0.92
SETX-205ENST00000477049 SPATA31D1Q6ZQQ2 1576 aa9.29□□□□□ -0.92
SETX-205ENST00000477049 RIPK4P57078 832 aa9.29□□□□□ -0.92
SETX-205ENST00000477049 SETD1AO15047 1707 aaKnown RBP9.29□□□□□ -0.92
SETX-205ENST00000477049 REREQ9P2R6 1566 aa9.28□□□□□ -0.92
SETX-205ENST00000477049 MVPQ14764 893 aaKnown RBP9.28□□□□□ -0.92
SETX-205ENST00000477049 SSH1Q8WYL5 1049 aa9.28□□□□□ -0.92
SETX-205ENST00000477049 SMC4Q9NTJ3 1288 aa9.28□□□□□ -0.92
SETX-205ENST00000477049 ZKSCAN2Q63HK3 967 aa9.28□□□□□ -0.92
SETX-205ENST00000477049 KIF20BQ96Q89 1820 aa9.28□□□□□ -0.92
SETX-205ENST00000477049 PMFBP1Q8TBY8 1022 aa9.27□□□□□ -0.92
SETX-205ENST00000477049 POLKQ9UBT6 870 aa9.27□□□□□ -0.92
SETX-205ENST00000477049 PDZRN3Q9UPQ7 1066 aa9.27□□□□□ -0.92
SETX-205ENST00000477049 DLC1Q96QB1 1528 aa9.27□□□□□ -0.93
SETX-205ENST00000477049 TRIM27P14373 513 aa9.27□□□□□ -0.93
SETX-205ENST00000477049 DZIP1LQ8IYY4 767 aaKnown RBP9.27□□□□□ -0.93
SETX-205ENST00000477049 NCKAP5LQ9HCH0 1330 aa9.27□□□□□ -0.93
SETX-205ENST00000477049 METP08581 1390 aa9.27□□□□□ -0.93
SETX-205ENST00000477049 ZRANB1Q9UGI0 708 aa9.27□□□□□ -0.93
SETX-205ENST00000477049 LRRC7Q96NW7 1537 aa9.27□□□□□ -0.93
SETX-205ENST00000477049 PPP6R1Q9UPN7 881 aa9.26□□□□□ -0.93
SETX-205ENST00000477049 NRXN3Q9Y4C0 1643 aa9.26□□□□□ -0.93
SETX-205ENST00000477049 VIRMAQ69YN4 1812 aaKnown RBP9.26□□□□□ -0.93
SETX-205ENST00000477049 PRKAR2BP31323 418 aa9.26□□□□□ -0.93
SETX-205ENST00000477049 TXNDC2Q86VQ3 553 aa9.26□□□□□ -0.93
SETX-205ENST00000477049 RSPH6AQ9H0K4 717 aa9.26□□□□□ -0.93
SETX-205ENST00000477049 ATP7BP35670 1465 aa9.26□□□□□ -0.93
SETX-205ENST00000477049 AAMPQ13685 434 aa9.26□□□□□ -0.93
SETX-205ENST00000477049 NME9Q86XW9 330 aa9.26□□□□□ -0.93
SETX-205ENST00000477049 EMILIN1Q9Y6C2 1016 aa9.26□□□□□ -0.93
SETX-205ENST00000477049 HMOX1P09601 288 aa9.25□□□□□ -0.93
SETX-205ENST00000477049 CT47B1P0C2W7 299 aaPredicted RBP9.25□□□□□ -0.93
SETX-205ENST00000477049 NOB1Q9ULX3 412 aaKnown RBP9.25□□□□□ -0.93
SETX-205ENST00000477049 IL16Q14005 1332 aa9.25□□□□□ -0.93
SETX-205ENST00000477049 PHACTR3Q96KR7 559 aa9.25□□□□□ -0.93
SETX-205ENST00000477049 FAM135BQ49AJ0 1406 aa9.24□□□□□ -0.93
SETX-205ENST00000477049 PPIP5K1Q6PFW1 1433 aa9.24□□□□□ -0.93
SETX-205ENST00000477049 WASLO00401 505 aaPredicted RBP9.24□□□□□ -0.93
SETX-205ENST00000477049 FCHSD2O94868 740 aa9.24□□□□□ -0.93
SETX-205ENST00000477049 THUMPD2Q9BTF0 503 aaKnown RBP9.24□□□□□ -0.93
SETX-205ENST00000477049 RWDD1Q9H446 243 aaPredicted RBP9.24□□□□□ -0.93
SETX-205ENST00000477049 CDC42BPGQ6DT37 1551 aa9.24□□□□□ -0.93
SETX-205ENST00000477049 ATF7IPQ6VMQ6 1270 aa9.24□□□□□ -0.93
SETX-205ENST00000477049 ITPRIPQ8IWB1 547 aa9.24□□□□□ -0.93
SETX-205ENST00000477049 CPSF1Q10570 1443 aaKnown RBP9.24□□□□□ -0.93
SETX-205ENST00000477049 NFKBIBQ15653 356 aa9.24□□□□□ -0.93
SETX-205ENST00000477049 USP35Q9P2H5 1018 aa9.24□□□□□ -0.93
SETX-205ENST00000477049 TMEM57Q8N5G2 664 aa9.23□□□□□ -0.93
SETX-205ENST00000477049 ZMYM3Q14202 1370 aa9.23□□□□□ -0.93
SETX-205ENST00000477049 GOLGA6L22H0YM25 854 aa9.23□□□□□ -0.93
SETX-205ENST00000477049 MAP2P11137 1827 aaKnown RBP9.23□□□□□ -0.93
SETX-205ENST00000477049 NUDT16Q96DE0 195 aaKnown RBP9.22□□□□□ -0.93
SETX-205ENST00000477049 TRIM44Q96DX7 344 aaPredicted RBP9.22□□□□□ -0.93
SETX-205ENST00000477049 CPS1P31327 1500 aa9.22□□□□□ -0.93
SETX-205ENST00000477049 EDC4Q6P2E9 1401 aaKnown RBP9.22□□□□□ -0.93
SETX-205ENST00000477049 IL13P35225 146 aa9.22□□□□□ -0.93
SETX-205ENST00000477049 RRS1Q15050 365 aaKnown RBP9.22□□□□□ -0.93
SETX-205ENST00000477049 PNNQ9H307 717 aaKnown RBP9.22□□□□□ -0.93
SETX-205ENST00000477049 DDX19BQ9UMR2 479 aa9.21□□□□□ -0.93
SETX-205ENST00000477049 NFE2L2Q16236 605 aa9.21□□□□□ -0.94
SETX-205ENST00000477049 GLIPR1L2Q4G1C9 344 aa9.21□□□□□ -0.94
SETX-205ENST00000477049 CHMP4BQ9H444 224 aaKnown RBP9.21□□□□□ -0.94
SETX-205ENST00000477049 PRR36Q9H6K5 1346 aa9.21□□□□□ -0.94
SETX-205ENST00000477049 TSPYL6Q8N831 410 aa9.21□□□□□ -0.94
SETX-205ENST00000477049 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.2□□□□□ -0.94
SETX-205ENST00000477049 ANO8Q9HCE9 1232 aaPredicted RBP9.2□□□□□ -0.94
SETX-205ENST00000477049 ZBTB40Q9NUA8 1239 aa9.2□□□□□ -0.94
SETX-205ENST00000477049 HDAC1Q13547 482 aaPredicted RBP9.2□□□□□ -0.94
SETX-205ENST00000477049 SLKQ9H2G2 1235 aaPredicted RBP9.2□□□□□ -0.94
SETX-205ENST00000477049 CCDC61Q9Y6R9 512 aa9.2□□□□□ -0.94
SETX-205ENST00000477049 KIF16BQ96L93 1317 aa9.19□□□□□ -0.94
SETX-205ENST00000477049 CDK12Q9NYV4 1490 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms