RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 NKTRP30414 1462 aaKnown RBP30.45■■■□□ 2.46
CCDC7-206ENST00000476558 RUNDC1Q96C34 613 aa30.45■■■□□ 2.46
CCDC7-206ENST00000476558 IQSEC2Q5JU85 1478 aa30.44■■■□□ 2.46
CCDC7-206ENST00000476558 GOLGA2Q08379 1002 aa30.43■■■□□ 2.46
CCDC7-206ENST00000476558 NME9Q86XW9 330 aa30.43■■■□□ 2.46
CCDC7-206ENST00000476558 RCAN3Q9UKA8 241 aa30.43■■■□□ 2.46
CCDC7-206ENST00000476558 ACEP12821 1306 aa30.42■■■□□ 2.46
CCDC7-206ENST00000476558 TRMT2AQ8IZ69 625 aaKnown RBP30.42■■■□□ 2.46
CCDC7-206ENST00000476558 DUSP27Q5VZP5 1158 aa30.41■■■□□ 2.46
CCDC7-206ENST00000476558 MAP2P11137 1827 aaKnown RBP30.4■■■□□ 2.46
CCDC7-206ENST00000476558 POLKQ9UBT6 870 aa30.4■■■□□ 2.46
CCDC7-206ENST00000476558 AATKQ6ZMQ8 1374 aa30.4■■■□□ 2.46
CCDC7-206ENST00000476558 SLFN5Q08AF3 891 aa30.39■■■□□ 2.46
CCDC7-206ENST00000476558 NPHP4O75161 1426 aaPredicted RBP30.39■■■□□ 2.45
CCDC7-206ENST00000476558 NCBP3Q53F19 620 aaKnown RBP30.38■■■□□ 2.45
CCDC7-206ENST00000476558 USP6P35125 1406 aa30.38■■■□□ 2.45
CCDC7-206ENST00000476558 SSH2Q76I76 1423 aa30.38■■■□□ 2.45
CCDC7-206ENST00000476558 RGPD8O14715 1765 aaPredicted RBP30.38■■■□□ 2.45
CCDC7-206ENST00000476558 NUTM2FA1L443 756 aa30.37■■■□□ 2.45
CCDC7-206ENST00000476558 PHF23Q9BUL5 403 aaPredicted RBP30.37■■■□□ 2.45
CCDC7-206ENST00000476558 PPP4R2Q9NY27 417 aa30.37■■■□□ 2.45
CCDC7-206ENST00000476558 ZRANB1Q9UGI0 708 aa30.37■■■□□ 2.45
CCDC7-206ENST00000476558 ANKARQ7Z5J8 1434 aa30.37■■■□□ 2.45
CCDC7-206ENST00000476558 TTC21BQ7Z4L5 1316 aa30.37■■■□□ 2.45
CCDC7-206ENST00000476558 FMN2Q9NZ56 1722 aa30.36■■■□□ 2.45
CCDC7-206ENST00000476558 U2AF1L5P0DN76 240 aaPredicted RBP30.36■■■□□ 2.45
CCDC7-206ENST00000476558 U2AF1Q01081 240 aaKnown RBP eCLIP30.36■■■□□ 2.45
CCDC7-206ENST00000476558 TCP11L2Q8N4U5 519 aa30.36■■■□□ 2.45
CCDC7-206ENST00000476558 RRP1P56182 461 aaKnown RBP30.34■■■□□ 2.45
CCDC7-206ENST00000476558 COG3Q96JB2 828 aa30.34■■■□□ 2.45
CCDC7-206ENST00000476558 FBLN1P23142 703 aa30.33■■■□□ 2.45
CCDC7-206ENST00000476558 WWC1Q8IX03 1113 aa30.33■■■□□ 2.45
CCDC7-206ENST00000476558 DIAPH1O60610 1272 aaKnown RBP30.33■■■□□ 2.45
CCDC7-206ENST00000476558 SPINK5Q9NQ38 1064 aaPredicted RBP30.32■■■□□ 2.44
CCDC7-206ENST00000476558 NALCNQ8IZF0 1738 aa30.32■■■□□ 2.44
CCDC7-206ENST00000476558 PLEKHF1Q96S99 279 aa30.31■■■□□ 2.44
CCDC7-206ENST00000476558 CCDC27Q2M243 656 aa30.31■■■□□ 2.44
CCDC7-206ENST00000476558 PELP1Q8IZL8 1130 aaKnown RBP30.3■■■□□ 2.44
CCDC7-206ENST00000476558 DMRT2Q9Y5R5 561 aa30.3■■■□□ 2.44
CCDC7-206ENST00000476558 OVOS2A0A0J9YW53 1432 aa30.3■■■□□ 2.44
CCDC7-206ENST00000476558 OVOS2Q6IE36 1432 aa30.3■■■□□ 2.44
CCDC7-206ENST00000476558 CDK12Q9NYV4 1490 aaPredicted RBP30.3■■■□□ 2.44
CCDC7-206ENST00000476558 E9PSI1 815 aa30.29■■■□□ 2.44
CCDC7-206ENST00000476558 U2SURPO15042 1029 aaKnown RBP30.27■■■□□ 2.44
CCDC7-206ENST00000476558 EMILIN1Q9Y6C2 1016 aa30.26■■■□□ 2.44
CCDC7-206ENST00000476558 TTC21AQ8NDW8 1320 aa30.26■■■□□ 2.43
CCDC7-206ENST00000476558 PMFBP1Q8TBY8 1022 aa30.25■■■□□ 2.43
CCDC7-206ENST00000476558 NWD1Q149M9 1564 aa30.25■■■□□ 2.43
CCDC7-206ENST00000476558 RRP7AQ9Y3A4 280 aaKnown RBP30.24■■■□□ 2.43
CCDC7-206ENST00000476558 WDR63Q8IWG1 891 aa30.24■■■□□ 2.43
CCDC7-206ENST00000476558 USP31Q70CQ4 1352 aa30.23■■■□□ 2.43
CCDC7-206ENST00000476558 ADGRL3Q9HAR2 1447 aa30.22■■■□□ 2.43
CCDC7-206ENST00000476558 PPM1GO15355 546 aaPredicted RBP30.21■■■□□ 2.43
CCDC7-206ENST00000476558 FCHSD2O94868 740 aa30.21■■■□□ 2.43
CCDC7-206ENST00000476558 IL13P35225 146 aa30.2■■■□□ 2.43
CCDC7-206ENST00000476558 NEUROD2Q15784 382 aa30.2■■■□□ 2.43
CCDC7-206ENST00000476558 NGDNQ8NEJ9 315 aaKnown RBP30.2■■■□□ 2.43
CCDC7-206ENST00000476558 PNNQ9H307 717 aaKnown RBP30.19■■■□□ 2.42
CCDC7-206ENST00000476558 RRS1Q15050 365 aaKnown RBP30.18■■■□□ 2.42
CCDC7-206ENST00000476558 LRRC7Q96NW7 1537 aa30.17■■■□□ 2.42
CCDC7-206ENST00000476558 TMPOP42166 694 aaKnown RBP30.16■■■□□ 2.42
CCDC7-206ENST00000476558 RSPH6AQ9H0K4 717 aa30.16■■■□□ 2.42
CCDC7-206ENST00000476558 PIK3C2AO00443 1686 aa30.15■■■□□ 2.42
CCDC7-206ENST00000476558 RBM33Q96EV2 1170 aaKnown RBP30.13■■■□□ 2.41
CCDC7-206ENST00000476558 MAPK8IP3Q9UPT6 1336 aa30.13■■■□□ 2.41
CCDC7-206ENST00000476558 USP54Q70EL1 1684 aa30.13■■■□□ 2.41
CCDC7-206ENST00000476558 B4GALNT3Q6L9W6 998 aa30.12■■■□□ 2.41
CCDC7-206ENST00000476558 TRIM35Q9UPQ4 493 aa30.12■■■□□ 2.41
CCDC7-206ENST00000476558 PEAK1Q9H792 1746 aa30.11■■■□□ 2.41
CCDC7-206ENST00000476558 PLIN1O60240 522 aa30.1■■■□□ 2.41
CCDC7-206ENST00000476558 PHF8Q9UPP1 1060 aa30.09■■■□□ 2.41
CCDC7-206ENST00000476558 MARF1Q9Y4F3 1742 aaKnown RBP30.09■■■□□ 2.41
CCDC7-206ENST00000476558 PRKAR2BP31323 418 aa30.08■■■□□ 2.41
CCDC7-206ENST00000476558 EXOC6Q8TAG9 804 aa30.08■■■□□ 2.41
CCDC7-206ENST00000476558 IL16Q14005 1332 aa30.04■■■□□ 2.4
CCDC7-206ENST00000476558 RIPK4P57078 832 aa30.03■■■□□ 2.4
CCDC7-206ENST00000476558 HMOX1P09601 288 aa30.03■■■□□ 2.4
CCDC7-206ENST00000476558 EIF4A2Q14240 407 aaKnown RBP30.03■■■□□ 2.4
CCDC7-206ENST00000476558 MYH16Q9H6N6 1097 aa30.03■■■□□ 2.4
CCDC7-206ENST00000476558 PHACTR3Q96KR7 559 aa30.02■■■□□ 2.4
CCDC7-206ENST00000476558 RGPD1P0DJD0 1748 aa30.02■■■□□ 2.4
CCDC7-206ENST00000476558 MAP3K19Q56UN5 1328 aa30.01■■■□□ 2.39
CCDC7-206ENST00000476558 PROSER2Q86WR7 435 aaPredicted RBP30.01■■■□□ 2.39
CCDC7-206ENST00000476558 GOLGA6L2Q8N9W4 650 aaPredicted RBP30■■■□□ 2.39
CCDC7-206ENST00000476558 CCDC136Q96JN2 1154 aa30■■■□□ 2.39
CCDC7-206ENST00000476558 KDM4FA0A1W2PPD8 638 aa29.99■■■□□ 2.39
CCDC7-206ENST00000476558 NLRP6P59044 892 aa29.99■■■□□ 2.39
CCDC7-206ENST00000476558 SBNO1A3KN83 1393 aa29.99■■■□□ 2.39
CCDC7-206ENST00000476558 NFE2L2Q16236 605 aa29.99■■■□□ 2.39
CCDC7-206ENST00000476558 HSP90AB2PQ58FF8 381 aa29.99■■■□□ 2.39
CCDC7-206ENST00000476558 C20orf194Q5TEA3 1177 aa29.99■■■□□ 2.39
CCDC7-206ENST00000476558 STRCP1A6NGW2 1772 aa29.98■■■□□ 2.39
CCDC7-206ENST00000476558 NEFMP07197 916 aa29.98■■■□□ 2.39
CCDC7-206ENST00000476558 BCAR3O75815 825 aa29.97■■■□□ 2.39
CCDC7-206ENST00000476558 C14orf37Q86TY3 774 aa29.97■■■□□ 2.39
CCDC7-206ENST00000476558 TSHZ2Q9NRE2 1034 aa29.97■■■□□ 2.39
CCDC7-206ENST00000476558 ESCO1Q5FWF5 840 aa29.96■■■□□ 2.39
CCDC7-206ENST00000476558 CRBNQ96SW2 442 aa29.96■■■□□ 2.39
CCDC7-206ENST00000476558 FLT4P35916 1363 aa29.96■■■□□ 2.39
CCDC7-206ENST00000476558 ABTB2Q8N961 1025 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms