RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 COL22A1Q8NFW1 1626 aaPredicted RBP29.42■■■□□ 2.3
MAP1LC3A-204ENST00000476428 TMC1Q8TDI8 760 aa29.41■■■□□ 2.3
MAP1LC3A-204ENST00000476428 TRPM3Q9HCF6 1732 aaPredicted RBP29.4■■■□□ 2.3
MAP1LC3A-204ENST00000476428 HSPA5P11021 654 aaKnown RBP29.4■■■□□ 2.3
MAP1LC3A-204ENST00000476428 ZNF692Q9BU19 519 aaPredicted RBP29.4■■■□□ 2.3
MAP1LC3A-204ENST00000476428 SLC12A5Q9H2X9 1139 aa29.4■■■□□ 2.3
MAP1LC3A-204ENST00000476428 C8orf37Q96NL8 207 aa29.38■■■□□ 2.29
MAP1LC3A-204ENST00000476428 USP6P35125 1406 aa29.37■■■□□ 2.29
MAP1LC3A-204ENST00000476428 BRD4O60885 1362 aaPredicted RBP29.36■■■□□ 2.29
MAP1LC3A-204ENST00000476428 HAP1P54257 671 aaPredicted RBP29.35■■■□□ 2.29
MAP1LC3A-204ENST00000476428 NUTM2GQ5VZR2 741 aa29.35■■■□□ 2.29
MAP1LC3A-204ENST00000476428 CPSF1Q10570 1443 aaKnown RBP29.35■■■□□ 2.29
MAP1LC3A-204ENST00000476428 ABTB2Q8N961 1025 aa29.34■■■□□ 2.29
MAP1LC3A-204ENST00000476428 NGLY1Q96IV0 654 aa29.34■■■□□ 2.29
MAP1LC3A-204ENST00000476428 RXRBP28702 533 aa29.33■■■□□ 2.29
MAP1LC3A-204ENST00000476428 CDCA8Q53HL2 280 aa29.33■■■□□ 2.29
MAP1LC3A-204ENST00000476428 ALS2Q96Q42 1657 aa29.32■■■□□ 2.28
MAP1LC3A-204ENST00000476428 SSH2Q76I76 1423 aa29.32■■■□□ 2.28
MAP1LC3A-204ENST00000476428 AFF2P51816 1311 aa29.32■■■□□ 2.28
MAP1LC3A-204ENST00000476428 KTN1Q86UP2 1357 aaKnown RBP29.31■■■□□ 2.28
MAP1LC3A-204ENST00000476428 TTC21BQ7Z4L5 1316 aa29.3■■■□□ 2.28
MAP1LC3A-204ENST00000476428 HDGFL2Q7Z4V5 671 aaPredicted RBP29.3■■■□□ 2.28
MAP1LC3A-204ENST00000476428 CD163L1Q9NR16 1453 aa29.29■■■□□ 2.28
MAP1LC3A-204ENST00000476428 TERF2IPQ9NYB0 399 aa29.29■■■□□ 2.28
MAP1LC3A-204ENST00000476428 NINLQ9Y2I6 1382 aa29.27■■■□□ 2.28
MAP1LC3A-204ENST00000476428 FNBP4Q8N3X1 1017 aaPredicted RBP29.27■■■□□ 2.28
MAP1LC3A-204ENST00000476428 NLRP13Q86W25 1043 aa29.26■■■□□ 2.27
MAP1LC3A-204ENST00000476428 NLRP6P59044 892 aa29.24■■■□□ 2.27
MAP1LC3A-204ENST00000476428 A0A1W2PP64 1363 aa29.24■■■□□ 2.27
MAP1LC3A-204ENST00000476428 TTC21AQ8NDW8 1320 aa29.23■■■□□ 2.27
MAP1LC3A-204ENST00000476428 USP21Q9UK80 565 aa29.23■■■□□ 2.27
MAP1LC3A-204ENST00000476428 FAM83GA6ND36 823 aa29.22■■■□□ 2.27
MAP1LC3A-204ENST00000476428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.22■■■□□ 2.27
MAP1LC3A-204ENST00000476428 USP19O94966 1318 aa29.21■■■□□ 2.27
MAP1LC3A-204ENST00000476428 QTRT2Q9H974 415 aaKnown RBP29.2■■■□□ 2.26
MAP1LC3A-204ENST00000476428 AKAP12Q02952 1782 aa29.2■■■□□ 2.26
MAP1LC3A-204ENST00000476428 POLR3GLQ9BT43 218 aa29.19■■■□□ 2.26
MAP1LC3A-204ENST00000476428 C11orf95C9JLR9 678 aaPredicted RBP29.18■■■□□ 2.26
MAP1LC3A-204ENST00000476428 GCP02774 474 aa29.18■■■□□ 2.26
MAP1LC3A-204ENST00000476428 ANKRD36BQ8N2N9 1353 aa29.17■■■□□ 2.26
MAP1LC3A-204ENST00000476428 ZC3H6P61129 1189 aaKnown RBP29.17■■■□□ 2.26
MAP1LC3A-204ENST00000476428 EDC4Q6P2E9 1401 aaKnown RBP29.17■■■□□ 2.26
MAP1LC3A-204ENST00000476428 NME9Q86XW9 330 aa29.16■■■□□ 2.26
MAP1LC3A-204ENST00000476428 ZRANB1Q9UGI0 708 aa29.16■■■□□ 2.26
MAP1LC3A-204ENST00000476428 ABCA3Q99758 1704 aa29.16■■■□□ 2.26
MAP1LC3A-204ENST00000476428 BCL9LQ86UU0 1499 aa29.16■■■□□ 2.26
MAP1LC3A-204ENST00000476428 CDK12Q9NYV4 1490 aaPredicted RBP29.16■■■□□ 2.26
MAP1LC3A-204ENST00000476428 PRDM11Q9NQV5 511 aa29.15■■■□□ 2.26
MAP1LC3A-204ENST00000476428 SLIT2O94813 1529 aa29.15■■■□□ 2.26
MAP1LC3A-204ENST00000476428 UNC5CLQ8IV45 518 aa29.14■■■□□ 2.26
MAP1LC3A-204ENST00000476428 KIAA0232Q92628 1395 aa29.13■■■□□ 2.25
MAP1LC3A-204ENST00000476428 TRPC5Q9UL62 973 aaPredicted RBP29.13■■■□□ 2.25
MAP1LC3A-204ENST00000476428 MON2Q7Z3U7 1717 aa29.13■■■□□ 2.25
MAP1LC3A-204ENST00000476428 CRYBG1Q9Y4K1 1723 aa29.13■■■□□ 2.25
MAP1LC3A-204ENST00000476428 NRKQ7Z2Y5 1582 aa29.13■■■□□ 2.25
MAP1LC3A-204ENST00000476428 MARF1Q9Y4F3 1742 aaKnown RBP29.12■■■□□ 2.25
MAP1LC3A-204ENST00000476428 USP31Q70CQ4 1352 aa29.12■■■□□ 2.25
MAP1LC3A-204ENST00000476428 PIK3C2AO00443 1686 aa29.12■■■□□ 2.25
MAP1LC3A-204ENST00000476428 CHRNA2Q15822 529 aa29.11■■■□□ 2.25
MAP1LC3A-204ENST00000476428 BTG4Q9NY30 223 aa29.1■■■□□ 2.25
MAP1LC3A-204ENST00000476428 CARD14Q9BXL6 1004 aa29.09■■■□□ 2.25
MAP1LC3A-204ENST00000476428 ATRNO75882 1429 aa29.09■■■□□ 2.25
MAP1LC3A-204ENST00000476428 PHRF1Q9P1Y6 1649 aaKnown RBP29.09■■■□□ 2.25
MAP1LC3A-204ENST00000476428 RBM6P78332 1123 aaKnown RBP29.08■■■□□ 2.25
MAP1LC3A-204ENST00000476428 CPDO75976 1380 aa29.08■■■□□ 2.25
MAP1LC3A-204ENST00000476428 SLIT3O75094 1523 aa29.07■■■□□ 2.24
MAP1LC3A-204ENST00000476428 KCNH5Q8NCM2 988 aa29.07■■■□□ 2.24
MAP1LC3A-204ENST00000476428 SOX12O15370 315 aa29.06■■■□□ 2.24
MAP1LC3A-204ENST00000476428 KIF7Q2M1P5 1343 aa29.04■■■□□ 2.24
MAP1LC3A-204ENST00000476428 ZBTB7CA1YPR0 619 aa29.03■■■□□ 2.24
MAP1LC3A-204ENST00000476428 FYB1O15117 783 aa29.03■■■□□ 2.24
MAP1LC3A-204ENST00000476428 VPS72Q15906 364 aa29.03■■■□□ 2.24
MAP1LC3A-204ENST00000476428 GJD4Q96KN9 370 aaPredicted RBP29.03■■■□□ 2.24
MAP1LC3A-204ENST00000476428 ARHGEF25Q86VW2 580 aa29.02■■■□□ 2.24
MAP1LC3A-204ENST00000476428 MYOM1P52179 1685 aa29.02■■■□□ 2.24
MAP1LC3A-204ENST00000476428 RGS12O14924 1447 aa29.02■■■□□ 2.24
MAP1LC3A-204ENST00000476428 COL14A1Q05707 1796 aaKnown RBP29.01■■■□□ 2.23
MAP1LC3A-204ENST00000476428 COG3Q96JB2 828 aa29■■■□□ 2.23
MAP1LC3A-204ENST00000476428 PANK3Q9H999 370 aa29■■■□□ 2.23
MAP1LC3A-204ENST00000476428 GGNBP2Q9H3C7 697 aa28.99■■■□□ 2.23
MAP1LC3A-204ENST00000476428 OVOS2A0A0J9YW53 1432 aa28.99■■■□□ 2.23
MAP1LC3A-204ENST00000476428 OVOS2Q6IE36 1432 aa28.99■■■□□ 2.23
MAP1LC3A-204ENST00000476428 NSD3Q9BZ95 1437 aa28.99■■■□□ 2.23
MAP1LC3A-204ENST00000476428 CCDC9Q9Y3X0 531 aaKnown RBP28.98■■■□□ 2.23
MAP1LC3A-204ENST00000476428 PLCH1Q4KWH8 1693 aa28.98■■■□□ 2.23
MAP1LC3A-204ENST00000476428 AATKQ6ZMQ8 1374 aa28.97■■■□□ 2.23
MAP1LC3A-204ENST00000476428 SRCAPQ6ZRS2 3230 aa28.96■■■□□ 2.23
MAP1LC3A-204ENST00000476428 STRN4Q9NRL3 753 aa28.96■■■□□ 2.23
MAP1LC3A-204ENST00000476428 NWD2Q9ULI1 1742 aa28.96■■■□□ 2.23
MAP1LC3A-204ENST00000476428 EVA1CP58658 441 aa28.95■■■□□ 2.22
MAP1LC3A-204ENST00000476428 NFAT5O94916 1531 aa28.94■■■□□ 2.22
MAP1LC3A-204ENST00000476428 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.94■■■□□ 2.22
MAP1LC3A-204ENST00000476428 CAMTA1Q9Y6Y1 1673 aa28.94■■■□□ 2.22
MAP1LC3A-204ENST00000476428 AXIN2Q9Y2T1 843 aa28.94■■■□□ 2.22
MAP1LC3A-204ENST00000476428 WASHC2AQ641Q2 1341 aa28.93■■■□□ 2.22
MAP1LC3A-204ENST00000476428 USP54Q70EL1 1684 aa28.93■■■□□ 2.22
MAP1LC3A-204ENST00000476428 CCDC7Q96M83 1385 aa28.92■■■□□ 2.22
MAP1LC3A-204ENST00000476428 FBLN1P23142 703 aa28.91■■■□□ 2.22
MAP1LC3A-204ENST00000476428 ZEB1P37275 1124 aaPredicted RBP28.91■■■□□ 2.22
MAP1LC3A-204ENST00000476428 CGNL1Q0VF96 1302 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms