RNA–Protein interactions for RNA: ENST00000476300.1

RPL13A-207, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-207ENST00000476300 PSME1Q06323 249 aa13.66□□□□□ -0.22
RPL13A-207ENST00000476300 ESCO1Q5FWF5 840 aa13.66□□□□□ -0.22
RPL13A-207ENST00000476300 NME9Q86XW9 330 aa13.66□□□□□ -0.22
RPL13A-207ENST00000476300 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
RPL13A-207ENST00000476300 PDE3BQ13370 1112 aa13.65□□□□□ -0.22
RPL13A-207ENST00000476300 CADPS2Q86UW7 1296 aa13.65□□□□□ -0.22
RPL13A-207ENST00000476300 PNNQ9H307 717 aaKnown RBP13.65□□□□□ -0.22
RPL13A-207ENST00000476300 NWD1Q149M9 1564 aa13.64□□□□□ -0.23
RPL13A-207ENST00000476300 USP6P35125 1406 aa13.64□□□□□ -0.23
RPL13A-207ENST00000476300 AATKQ6ZMQ8 1374 aa13.63□□□□□ -0.23
RPL13A-207ENST00000476300 ITSN1Q15811 1721 aa13.62□□□□□ -0.23
RPL13A-207ENST00000476300 TMEM94Q12767 1356 aa13.62□□□□□ -0.23
RPL13A-207ENST00000476300 DIAPH1O60610 1272 aaKnown RBP13.62□□□□□ -0.23
RPL13A-207ENST00000476300 POLKQ9UBT6 870 aa13.62□□□□□ -0.23
RPL13A-207ENST00000476300 AKAP12Q02952 1782 aa13.61□□□□□ -0.23
RPL13A-207ENST00000476300 SSH2Q76I76 1423 aa13.61□□□□□ -0.23
RPL13A-207ENST00000476300 USP31Q70CQ4 1352 aa13.6□□□□□ -0.23
RPL13A-207ENST00000476300 PPM1GO15355 546 aaPredicted RBP13.6□□□□□ -0.23
RPL13A-207ENST00000476300 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
RPL13A-207ENST00000476300 U2AF1L5P0DN76 240 aaPredicted RBP13.6□□□□□ -0.23
RPL13A-207ENST00000476300 NLRP6P59044 892 aa13.6□□□□□ -0.23
RPL13A-207ENST00000476300 U2AF1Q01081 240 aaKnown RBP eCLIP13.6□□□□□ -0.23
RPL13A-207ENST00000476300 ABTB2Q8N961 1025 aa13.6□□□□□ -0.23
RPL13A-207ENST00000476300 RUNDC1Q96C34 613 aa13.6□□□□□ -0.23
RPL13A-207ENST00000476300 FMN2Q9NZ56 1722 aa13.6□□□□□ -0.23
RPL13A-207ENST00000476300 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
RPL13A-207ENST00000476300 TOPAZ1Q8N9V7 1692 aa13.59□□□□□ -0.23
RPL13A-207ENST00000476300 MSH6P52701 1360 aa13.59□□□□□ -0.23
RPL13A-207ENST00000476300 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
RPL13A-207ENST00000476300 BLMP54132 1417 aaPredicted RBP13.59□□□□□ -0.23
RPL13A-207ENST00000476300 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
RPL13A-207ENST00000476300 ANKRD26Q9UPS8 1709 aa13.59□□□□□ -0.23
RPL13A-207ENST00000476300 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.23
RPL13A-207ENST00000476300 DCCP43146 1447 aa13.58□□□□□ -0.24
RPL13A-207ENST00000476300 KIF20BQ96Q89 1820 aa13.58□□□□□ -0.24
RPL13A-207ENST00000476300 ORAI2Q96SN7 254 aa13.58□□□□□ -0.24
RPL13A-207ENST00000476300 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
RPL13A-207ENST00000476300 FOXO3O43524 673 aa13.57□□□□□ -0.24
RPL13A-207ENST00000476300 NEFMP07197 916 aa13.57□□□□□ -0.24
RPL13A-207ENST00000476300 KRT28Q7Z3Y7 464 aa13.57□□□□□ -0.24
RPL13A-207ENST00000476300 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
RPL13A-207ENST00000476300 STRCQ7RTU9 1775 aa13.57□□□□□ -0.24
RPL13A-207ENST00000476300 APAF1O14727 1248 aa13.56□□□□□ -0.24
RPL13A-207ENST00000476300 FCHSD2O94868 740 aa13.56□□□□□ -0.24
RPL13A-207ENST00000476300 SALL2Q9Y467 1007 aaPredicted RBP13.56□□□□□ -0.24
RPL13A-207ENST00000476300 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
RPL13A-207ENST00000476300 NALCNQ8IZF0 1738 aa13.56□□□□□ -0.24
RPL13A-207ENST00000476300 C1orf167Q5SNV9 1468 aa13.55□□□□□ -0.24
RPL13A-207ENST00000476300 FBLN1P23142 703 aa13.55□□□□□ -0.24
RPL13A-207ENST00000476300 CCDC146Q8IYE0 955 aa13.55□□□□□ -0.24
RPL13A-207ENST00000476300 KCNH5Q8NCM2 988 aa13.55□□□□□ -0.24
RPL13A-207ENST00000476300 RRS1Q15050 365 aaKnown RBP13.54□□□□□ -0.24
RPL13A-207ENST00000476300 EMILIN1Q9Y6C2 1016 aa13.54□□□□□ -0.24
RPL13A-207ENST00000476300 ZNF335Q9H4Z2 1342 aaPredicted RBP13.54□□□□□ -0.24
RPL13A-207ENST00000476300 MAP2P11137 1827 aaKnown RBP13.53□□□□□ -0.24
RPL13A-207ENST00000476300 IL13P35225 146 aa13.53□□□□□ -0.24
RPL13A-207ENST00000476300 AMPHP49418 695 aa13.53□□□□□ -0.24
RPL13A-207ENST00000476300 OVOS2A0A0J9YW53 1432 aa13.53□□□□□ -0.24
RPL13A-207ENST00000476300 OVOS2Q6IE36 1432 aa13.53□□□□□ -0.24
RPL13A-207ENST00000476300 NEFLP07196 543 aa13.52□□□□□ -0.25
RPL13A-207ENST00000476300 GOLGA2Q08379 1002 aa13.52□□□□□ -0.25
RPL13A-207ENST00000476300 TCP11L2Q8N4U5 519 aa13.52□□□□□ -0.25
RPL13A-207ENST00000476300 SLAIN2Q9P270 581 aa13.52□□□□□ -0.25
RPL13A-207ENST00000476300 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
RPL13A-207ENST00000476300 SMG6Q86US8 1419 aaKnown RBP13.52□□□□□ -0.25
RPL13A-207ENST00000476300 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
RPL13A-207ENST00000476300 MAPK8IP3Q9UPT6 1336 aa13.51□□□□□ -0.25
RPL13A-207ENST00000476300 CCDC27Q2M243 656 aa13.51□□□□□ -0.25
RPL13A-207ENST00000476300 LRRC7Q96NW7 1537 aa13.5□□□□□ -0.25
RPL13A-207ENST00000476300 MST1RQ04912 1400 aa13.5□□□□□ -0.25
RPL13A-207ENST00000476300 SENP3-EIF4A1A0A087X0R7 540 aa13.5□□□□□ -0.25
RPL13A-207ENST00000476300 NUTM2GQ5VZR2 741 aa13.5□□□□□ -0.25
RPL13A-207ENST00000476300 LMOD2Q6P5Q4 547 aa13.5□□□□□ -0.25
RPL13A-207ENST00000476300 STRCP1A6NGW2 1772 aa13.5□□□□□ -0.25
RPL13A-207ENST00000476300 CDK12Q9NYV4 1490 aaPredicted RBP13.49□□□□□ -0.25
RPL13A-207ENST00000476300 SOX12O15370 315 aa13.49□□□□□ -0.25
RPL13A-207ENST00000476300 WDR63Q8IWG1 891 aa13.49□□□□□ -0.25
RPL13A-207ENST00000476300 PLEKHF1Q96S99 279 aa13.49□□□□□ -0.25
RPL13A-207ENST00000476300 NRKQ7Z2Y5 1582 aa13.49□□□□□ -0.25
RPL13A-207ENST00000476300 SBNO1A3KN83 1393 aa13.48□□□□□ -0.25
RPL13A-207ENST00000476300 MAP3K19Q56UN5 1328 aa13.48□□□□□ -0.25
RPL13A-207ENST00000476300 SUPT16HQ9Y5B9 1047 aaKnown RBP13.48□□□□□ -0.25
RPL13A-207ENST00000476300 COL3A1P02461 1466 aaPredicted RBP13.48□□□□□ -0.25
RPL13A-207ENST00000476300 FLT4P35916 1363 aa13.47□□□□□ -0.25
RPL13A-207ENST00000476300 ZNF521Q96K83 1311 aa13.47□□□□□ -0.25
RPL13A-207ENST00000476300 E9PSI1 815 aa13.47□□□□□ -0.25
RPL13A-207ENST00000476300 XPCQ01831 940 aaPredicted RBP13.47□□□□□ -0.25
RPL13A-207ENST00000476300 SLFN5Q08AF3 891 aa13.47□□□□□ -0.25
RPL13A-207ENST00000476300 EIF4A2Q14240 407 aaKnown RBP13.47□□□□□ -0.25
RPL13A-207ENST00000476300 NEUROD2Q15784 382 aa13.47□□□□□ -0.25
RPL13A-207ENST00000476300 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
RPL13A-207ENST00000476300 WWC1Q8IX03 1113 aa13.47□□□□□ -0.25
RPL13A-207ENST00000476300 KIF1AQ12756 1690 aa13.47□□□□□ -0.25
RPL13A-207ENST00000476300 GCP02774 474 aa13.46□□□□□ -0.25
RPL13A-207ENST00000476300 TMPOP42166 694 aaKnown RBP13.46□□□□□ -0.25
RPL13A-207ENST00000476300 ILDR1Q86SU0 546 aaPredicted RBP13.46□□□□□ -0.25
RPL13A-207ENST00000476300 IP6K1Q92551 441 aa13.46□□□□□ -0.25
RPL13A-207ENST00000476300 CDCA7LQ96GN5 454 aa13.46□□□□□ -0.25
RPL13A-207ENST00000476300 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.25
RPL13A-207ENST00000476300 HOXC9P31274 260 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms