RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 TSR2Q969E8 191 aaKnown RBP11.54□□□□□ -0.56
CCDC66-216ENST00000476142 WASLO00401 505 aaPredicted RBP11.54□□□□□ -0.56
CCDC66-216ENST00000476142 NLRP1Q9C000 1473 aa11.53□□□□□ -0.56
CCDC66-216ENST00000476142 KIF13AQ9H1H9 1805 aa11.53□□□□□ -0.56
CCDC66-216ENST00000476142 TMPOP42166 694 aaKnown RBP11.53□□□□□ -0.56
CCDC66-216ENST00000476142 PDE3AQ14432 1141 aa11.53□□□□□ -0.56
CCDC66-216ENST00000476142 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
CCDC66-216ENST00000476142 NCKAP5LQ9HCH0 1330 aa11.53□□□□□ -0.56
CCDC66-216ENST00000476142 DLC1Q96QB1 1528 aa11.53□□□□□ -0.56
CCDC66-216ENST00000476142 PLEKHF1Q96S99 279 aa11.53□□□□□ -0.56
CCDC66-216ENST00000476142 CLUAP1Q96AJ1 413 aa11.52□□□□□ -0.56
CCDC66-216ENST00000476142 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.56
CCDC66-216ENST00000476142 RIPK4P57078 832 aa11.52□□□□□ -0.57
CCDC66-216ENST00000476142 NME9Q86XW9 330 aa11.52□□□□□ -0.57
CCDC66-216ENST00000476142 NUDT16Q96DE0 195 aaKnown RBP11.52□□□□□ -0.57
CCDC66-216ENST00000476142 TNNQ9UQP3 1299 aa11.52□□□□□ -0.57
CCDC66-216ENST00000476142 MED14O60244 1454 aa11.52□□□□□ -0.57
CCDC66-216ENST00000476142 COL3A1P02461 1466 aaPredicted RBP11.52□□□□□ -0.57
CCDC66-216ENST00000476142 CEBPAP49715 358 aaPredicted RBP11.51□□□□□ -0.57
CCDC66-216ENST00000476142 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
CCDC66-216ENST00000476142 IGHDP01880 384 aa11.5□□□□□ -0.57
CCDC66-216ENST00000476142 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
CCDC66-216ENST00000476142 TRIM35Q9UPQ4 493 aa11.5□□□□□ -0.57
CCDC66-216ENST00000476142 ATP7BP35670 1465 aa11.5□□□□□ -0.57
CCDC66-216ENST00000476142 NUTM2FA1L443 756 aa11.5□□□□□ -0.57
CCDC66-216ENST00000476142 NEFMP07197 916 aa11.5□□□□□ -0.57
CCDC66-216ENST00000476142 EXOSC9Q06265 439 aaKnown RBP11.5□□□□□ -0.57
CCDC66-216ENST00000476142 HMOX1P09601 288 aa11.5□□□□□ -0.57
CCDC66-216ENST00000476142 RLBP1P12271 317 aa11.5□□□□□ -0.57
CCDC66-216ENST00000476142 PNNQ9H307 717 aaKnown RBP11.5□□□□□ -0.57
CCDC66-216ENST00000476142 EMILIN1Q9Y6C2 1016 aa11.5□□□□□ -0.57
CCDC66-216ENST00000476142 TMEM2Q9UHN6 1383 aa11.49□□□□□ -0.57
CCDC66-216ENST00000476142 NRXN3Q9Y4C0 1643 aa11.49□□□□□ -0.57
CCDC66-216ENST00000476142 SETD1AO15047 1707 aaKnown RBP11.49□□□□□ -0.57
CCDC66-216ENST00000476142 PRKAR2BP31323 418 aa11.49□□□□□ -0.57
CCDC66-216ENST00000476142 NBR1Q14596 966 aa11.49□□□□□ -0.57
CCDC66-216ENST00000476142 SMC4Q9NTJ3 1288 aa11.49□□□□□ -0.57
CCDC66-216ENST00000476142 ADGRB2O60241 1585 aa11.49□□□□□ -0.57
CCDC66-216ENST00000476142 FTSJ3Q8IY81 847 aaKnown RBP11.48□□□□□ -0.57
CCDC66-216ENST00000476142 ANKRD26Q9UPS8 1709 aa11.48□□□□□ -0.57
CCDC66-216ENST00000476142 LAS1LQ9Y4W2 734 aaKnown RBP11.48□□□□□ -0.57
CCDC66-216ENST00000476142 CCDC61Q9Y6R9 512 aa11.48□□□□□ -0.57
CCDC66-216ENST00000476142 PNPLA6Q8IY17 1366 aa11.48□□□□□ -0.57
CCDC66-216ENST00000476142 NCBP3Q53F19 620 aaKnown RBP11.48□□□□□ -0.57
CCDC66-216ENST00000476142 COG3Q96JB2 828 aa11.48□□□□□ -0.57
CCDC66-216ENST00000476142 KIF20BQ96Q89 1820 aa11.48□□□□□ -0.57
CCDC66-216ENST00000476142 EDC4Q6P2E9 1401 aaKnown RBP11.47□□□□□ -0.57
CCDC66-216ENST00000476142 SLC26A8Q96RN1 970 aa11.47□□□□□ -0.57
CCDC66-216ENST00000476142 FCHSD2O94868 740 aa11.47□□□□□ -0.57
CCDC66-216ENST00000476142 RRS1Q15050 365 aaKnown RBP11.47□□□□□ -0.57
CCDC66-216ENST00000476142 ROBO2Q9HCK4 1378 aa11.46□□□□□ -0.57
CCDC66-216ENST00000476142 LTKP29376 864 aa11.46□□□□□ -0.57
CCDC66-216ENST00000476142 FAM161AQ3B820 660 aa11.46□□□□□ -0.57
CCDC66-216ENST00000476142 ZKSCAN2Q63HK3 967 aa11.46□□□□□ -0.57
CCDC66-216ENST00000476142 RSPH6AQ9H0K4 717 aa11.46□□□□□ -0.58
CCDC66-216ENST00000476142 CPSF1Q10570 1443 aaKnown RBP11.46□□□□□ -0.58
CCDC66-216ENST00000476142 FAM135BQ49AJ0 1406 aa11.46□□□□□ -0.58
CCDC66-216ENST00000476142 PRR36Q9H6K5 1346 aa11.45□□□□□ -0.58
CCDC66-216ENST00000476142 SSH1Q8WYL5 1049 aa11.45□□□□□ -0.58
CCDC66-216ENST00000476142 DZIP1LQ8IYY4 767 aaKnown RBP11.45□□□□□ -0.58
CCDC66-216ENST00000476142 PHACTR3Q96KR7 559 aa11.45□□□□□ -0.58
CCDC66-216ENST00000476142 PCDHB15Q9Y5E8 787 aa11.45□□□□□ -0.58
CCDC66-216ENST00000476142 EID1Q9Y6B2 187 aa11.45□□□□□ -0.58
CCDC66-216ENST00000476142 C8orf34Q49A92 452 aa11.44□□□□□ -0.58
CCDC66-216ENST00000476142 SIRT1Q96EB6 747 aa11.44□□□□□ -0.58
CCDC66-216ENST00000476142 THUMPD2Q9BTF0 503 aaKnown RBP11.44□□□□□ -0.58
CCDC66-216ENST00000476142 LRRC7Q96NW7 1537 aa11.44□□□□□ -0.58
CCDC66-216ENST00000476142 IL16Q14005 1332 aa11.44□□□□□ -0.58
CCDC66-216ENST00000476142 CT47B1P0C2W7 299 aaPredicted RBP11.44□□□□□ -0.58
CCDC66-216ENST00000476142 PMFBP1Q8TBY8 1022 aa11.44□□□□□ -0.58
CCDC66-216ENST00000476142 TECPR2O15040 1411 aa11.43□□□□□ -0.58
CCDC66-216ENST00000476142 ADAMTS13Q76LX8 1427 aa11.43□□□□□ -0.58
CCDC66-216ENST00000476142 SOX12O15370 315 aa11.43□□□□□ -0.58
CCDC66-216ENST00000476142 MVPQ14764 893 aaKnown RBP11.43□□□□□ -0.58
CCDC66-216ENST00000476142 ITPRIPQ8IWB1 547 aa11.43□□□□□ -0.58
CCDC66-216ENST00000476142 CPS1P31327 1500 aa11.43□□□□□ -0.58
CCDC66-216ENST00000476142 UBR1Q8IWV7 1749 aa11.43□□□□□ -0.58
CCDC66-216ENST00000476142 IL13P35225 146 aa11.43□□□□□ -0.58
CCDC66-216ENST00000476142 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
CCDC66-216ENST00000476142 NOB1Q9ULX3 412 aaKnown RBP11.43□□□□□ -0.58
CCDC66-216ENST00000476142 CDC42BPGQ6DT37 1551 aa11.42□□□□□ -0.58
CCDC66-216ENST00000476142 NFE2L2Q16236 605 aa11.42□□□□□ -0.58
CCDC66-216ENST00000476142 PLEKHG1Q9ULL1 1385 aa11.42□□□□□ -0.58
CCDC66-216ENST00000476142 TRIM27P14373 513 aa11.42□□□□□ -0.58
CCDC66-216ENST00000476142 ACEP12821 1306 aa11.41□□□□□ -0.58
CCDC66-216ENST00000476142 TRHP20396 242 aaPredicted RBP11.41□□□□□ -0.58
CCDC66-216ENST00000476142 AAMPQ13685 434 aa11.41□□□□□ -0.58
CCDC66-216ENST00000476142 DDRGK1Q96HY6 314 aa11.41□□□□□ -0.58
CCDC66-216ENST00000476142 RWDD1Q9H446 243 aaPredicted RBP11.41□□□□□ -0.58
CCDC66-216ENST00000476142 ATF7IPQ6VMQ6 1270 aa11.4□□□□□ -0.58
CCDC66-216ENST00000476142 AMOTL2Q9Y2J4 779 aa11.4□□□□□ -0.58
CCDC66-216ENST00000476142 KNDC1Q76NI1 1749 aa11.4□□□□□ -0.58
CCDC66-216ENST00000476142 AATKQ6ZMQ8 1374 aa11.4□□□□□ -0.59
CCDC66-216ENST00000476142 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
CCDC66-216ENST00000476142 DAXXQ9UER7 740 aaPredicted RBP11.39□□□□□ -0.59
CCDC66-216ENST00000476142 CDK12Q9NYV4 1490 aaPredicted RBP11.39□□□□□ -0.59
CCDC66-216ENST00000476142 TTC21BQ7Z4L5 1316 aa11.39□□□□□ -0.59
CCDC66-216ENST00000476142 MAP2P11137 1827 aaKnown RBP11.39□□□□□ -0.59
CCDC66-216ENST00000476142 SLC4A3P48751 1232 aa11.39□□□□□ -0.59
CCDC66-216ENST00000476142 PDZRN3Q9UPQ7 1066 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms