RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 KTN1Q86UP2 1357 aaKnown RBP30.72■■■□□ 2.51
MCF2L2-209ENST00000475664 TNS3Q68CZ2 1445 aa30.69■■■□□ 2.5
MCF2L2-209ENST00000475664 SPATA31A3Q5VYP0 1347 aa30.68■■■□□ 2.5
MCF2L2-209ENST00000475664 EDC4Q6P2E9 1401 aaKnown RBP30.67■■■□□ 2.5
MCF2L2-209ENST00000475664 LRRC59Q96AG4 307 aaKnown RBP30.67■■■□□ 2.5
MCF2L2-209ENST00000475664 SHPRHQ149N8 1683 aa30.67■■■□□ 2.5
MCF2L2-209ENST00000475664 TTC21BQ7Z4L5 1316 aa30.64■■■□□ 2.5
MCF2L2-209ENST00000475664 PIK3C2AO00443 1686 aa30.64■■■□□ 2.5
MCF2L2-209ENST00000475664 COL22A1Q8NFW1 1626 aaPredicted RBP30.63■■■□□ 2.49
MCF2L2-209ENST00000475664 ILDR1Q86SU0 546 aaPredicted RBP30.63■■■□□ 2.49
MCF2L2-209ENST00000475664 ZNF316A6NFI3 1004 aaPredicted RBP30.62■■■□□ 2.49
MCF2L2-209ENST00000475664 PAK3O75914 559 aaPredicted RBP30.62■■■□□ 2.49
MCF2L2-209ENST00000475664 CARD14Q9BXL6 1004 aa30.62■■■□□ 2.49
MCF2L2-209ENST00000475664 PANK3Q9H999 370 aa30.62■■■□□ 2.49
MCF2L2-209ENST00000475664 PNPLA6Q8IY17 1366 aa30.62■■■□□ 2.49
MCF2L2-209ENST00000475664 TTC21AQ8NDW8 1320 aa30.61■■■□□ 2.49
MCF2L2-209ENST00000475664 ARHGEF10O15013 1369 aa30.61■■■□□ 2.49
MCF2L2-209ENST00000475664 JCADQ9P266 1359 aa30.61■■■□□ 2.49
MCF2L2-209ENST00000475664 NSD3Q9BZ95 1437 aa30.6■■■□□ 2.49
MCF2L2-209ENST00000475664 MED1Q15648 1581 aaPredicted RBP30.58■■■□□ 2.49
MCF2L2-209ENST00000475664 KIF20BQ96Q89 1820 aa30.57■■■□□ 2.48
MCF2L2-209ENST00000475664 CRYBG1Q9Y4K1 1723 aa30.57■■■□□ 2.48
MCF2L2-209ENST00000475664 USP54Q70EL1 1684 aa30.57■■■□□ 2.48
MCF2L2-209ENST00000475664 MARF1Q9Y4F3 1742 aaKnown RBP30.56■■■□□ 2.48
MCF2L2-209ENST00000475664 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.56■■■□□ 2.48
MCF2L2-209ENST00000475664 LMOD2Q6P5Q4 547 aa30.55■■■□□ 2.48
MCF2L2-209ENST00000475664 ABTB2Q8N961 1025 aa30.55■■■□□ 2.48
MCF2L2-209ENST00000475664 ABCA3Q99758 1704 aa30.55■■■□□ 2.48
MCF2L2-209ENST00000475664 NME9Q86XW9 330 aa30.52■■■□□ 2.48
MCF2L2-209ENST00000475664 PHRF1Q9P1Y6 1649 aaKnown RBP30.51■■■□□ 2.48
MCF2L2-209ENST00000475664 USP31Q70CQ4 1352 aa30.51■■■□□ 2.47
MCF2L2-209ENST00000475664 NUTM2GQ5VZR2 741 aa30.5■■■□□ 2.47
MCF2L2-209ENST00000475664 OVOS2A0A0J9YW53 1432 aa30.48■■■□□ 2.47
MCF2L2-209ENST00000475664 OVOS2Q6IE36 1432 aa30.48■■■□□ 2.47
MCF2L2-209ENST00000475664 PER1O15534 1290 aaPredicted RBP30.48■■■□□ 2.47
MCF2L2-209ENST00000475664 USP19O94966 1318 aa30.47■■■□□ 2.47
MCF2L2-209ENST00000475664 SPATA31A6Q5VVP1 1343 aa30.47■■■□□ 2.47
MCF2L2-209ENST00000475664 NLRP6P59044 892 aa30.47■■■□□ 2.47
MCF2L2-209ENST00000475664 NLRP13Q86W25 1043 aa30.47■■■□□ 2.47
MCF2L2-209ENST00000475664 ZRANB1Q9UGI0 708 aa30.47■■■□□ 2.47
MCF2L2-209ENST00000475664 ANKRD26Q9UPS8 1709 aa30.47■■■□□ 2.47
MCF2L2-209ENST00000475664 SLIT3O75094 1523 aa30.47■■■□□ 2.47
MCF2L2-209ENST00000475664 CGNL1Q0VF96 1302 aa30.47■■■□□ 2.47
MCF2L2-209ENST00000475664 FYB1O15117 783 aa30.46■■■□□ 2.47
MCF2L2-209ENST00000475664 KNSTRNQ9Y448 316 aa30.45■■■□□ 2.47
MCF2L2-209ENST00000475664 DDX10Q13206 875 aaKnown RBP30.44■■■□□ 2.46
MCF2L2-209ENST00000475664 CABLES1Q8TDN4 633 aa30.44■■■□□ 2.46
MCF2L2-209ENST00000475664 GGNBP2Q9H3C7 697 aa30.42■■■□□ 2.46
MCF2L2-209ENST00000475664 LRP6O75581 1613 aa30.42■■■□□ 2.46
MCF2L2-209ENST00000475664 PLEKHG5O94827 1062 aa30.41■■■□□ 2.46
MCF2L2-209ENST00000475664 AMER1Q5JTC6 1135 aaPredicted RBP30.41■■■□□ 2.46
MCF2L2-209ENST00000475664 NSD2O96028 1365 aa30.41■■■□□ 2.46
MCF2L2-209ENST00000475664 COG3Q96JB2 828 aa30.38■■■□□ 2.45
MCF2L2-209ENST00000475664 NFAT5O94916 1531 aa30.37■■■□□ 2.45
MCF2L2-209ENST00000475664 NUTM2BA6NNL0 878 aaPredicted RBP30.37■■■□□ 2.45
MCF2L2-209ENST00000475664 NUTM2EB1AL46 878 aaPredicted RBP30.37■■■□□ 2.45
MCF2L2-209ENST00000475664 NUTM2AQ8IVF1 878 aaPredicted RBP30.37■■■□□ 2.45
MCF2L2-209ENST00000475664 NPC1L1Q9UHC9 1359 aa30.37■■■□□ 2.45
MCF2L2-209ENST00000475664 GCP02774 474 aa30.35■■■□□ 2.45
MCF2L2-209ENST00000475664 HAP1P54257 671 aaPredicted RBP30.34■■■□□ 2.45
MCF2L2-209ENST00000475664 KCNH5Q8NCM2 988 aa30.32■■■□□ 2.44
MCF2L2-209ENST00000475664 CPDO75976 1380 aa30.29■■■□□ 2.44
MCF2L2-209ENST00000475664 LTN1O94822 1766 aa30.29■■■□□ 2.44
MCF2L2-209ENST00000475664 ADAMTS2O95450 1211 aa30.29■■■□□ 2.44
MCF2L2-209ENST00000475664 SOX12O15370 315 aa30.28■■■□□ 2.44
MCF2L2-209ENST00000475664 CC2D1BQ5T0F9 858 aaKnown RBP30.28■■■□□ 2.44
MCF2L2-209ENST00000475664 KIAA0232Q92628 1395 aa30.28■■■□□ 2.44
MCF2L2-209ENST00000475664 COL14A1Q05707 1796 aaKnown RBP30.26■■■□□ 2.44
MCF2L2-209ENST00000475664 ZC3H6P61129 1189 aaKnown RBP30.26■■■□□ 2.43
MCF2L2-209ENST00000475664 MORC1Q86VD1 984 aa30.24■■■□□ 2.43
MCF2L2-209ENST00000475664 PLCH1Q4KWH8 1693 aa30.23■■■□□ 2.43
MCF2L2-209ENST00000475664 COL18A1P39060 1754 aa30.23■■■□□ 2.43
MCF2L2-209ENST00000475664 ARHGEF25Q86VW2 580 aa30.23■■■□□ 2.43
MCF2L2-209ENST00000475664 LMO7Q8WWI1 1683 aa30.23■■■□□ 2.43
MCF2L2-209ENST00000475664 MAP2P11137 1827 aaKnown RBP30.22■■■□□ 2.43
MCF2L2-209ENST00000475664 FBLN1P23142 703 aa30.22■■■□□ 2.43
MCF2L2-209ENST00000475664 MEX3CQ5U5Q3 659 aaKnown RBP30.22■■■□□ 2.43
MCF2L2-209ENST00000475664 PRDM11Q9NQV5 511 aa30.22■■■□□ 2.43
MCF2L2-209ENST00000475664 AATKQ6ZMQ8 1374 aa30.22■■■□□ 2.43
MCF2L2-209ENST00000475664 FAM83GA6ND36 823 aa30.2■■■□□ 2.43
MCF2L2-209ENST00000475664 ABCC6O95255 1503 aa30.2■■■□□ 2.42
MCF2L2-209ENST00000475664 NWD2Q9ULI1 1742 aa30.19■■■□□ 2.42
MCF2L2-209ENST00000475664 CNGB1Q14028 1251 aaPredicted RBP30.19■■■□□ 2.42
MCF2L2-209ENST00000475664 C8orf37Q96NL8 207 aa30.19■■■□□ 2.42
MCF2L2-209ENST00000475664 CHRNA2Q15822 529 aa30.18■■■□□ 2.42
MCF2L2-209ENST00000475664 MAP3K19Q56UN5 1328 aa30.18■■■□□ 2.42
MCF2L2-209ENST00000475664 SLIT2O94813 1529 aa30.17■■■□□ 2.42
MCF2L2-209ENST00000475664 PEAK1Q9H792 1746 aa30.17■■■□□ 2.42
MCF2L2-209ENST00000475664 TNNT2P45379 298 aaPredicted RBP30.17■■■□□ 2.42
MCF2L2-209ENST00000475664 RGPD5Q99666 1765 aa30.16■■■□□ 2.42
MCF2L2-209ENST00000475664 RRS1Q15050 365 aaKnown RBP30.16■■■□□ 2.42
MCF2L2-209ENST00000475664 NRAPQ86VF7 1730 aa30.16■■■□□ 2.42
MCF2L2-209ENST00000475664 PARD3Q8TEW0 1356 aa30.15■■■□□ 2.42
MCF2L2-209ENST00000475664 ZBTB7CA1YPR0 619 aa30.15■■■□□ 2.42
MCF2L2-209ENST00000475664 NGLY1Q96IV0 654 aa30.15■■■□□ 2.42
MCF2L2-209ENST00000475664 CAMTA1Q9Y6Y1 1673 aa30.14■■■□□ 2.42
MCF2L2-209ENST00000475664 SMG6Q86US8 1419 aaKnown RBP30.13■■■□□ 2.41
MCF2L2-209ENST00000475664 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.13■■■□□ 2.41
MCF2L2-209ENST00000475664 FNBP4Q8N3X1 1017 aaPredicted RBP30.13■■■□□ 2.41
MCF2L2-209ENST00000475664 RTL1A6NKG5 1358 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms