RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 RNF25Q96BH1 459 aaPredicted RBP11.25□□□□□ -0.61
HLA-DMA-207ENST00000475627 CDK19Q9BWU1 502 aa11.25□□□□□ -0.61
HLA-DMA-207ENST00000475627 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.25□□□□□ -0.61
HLA-DMA-207ENST00000475627 FMN2Q9NZ56 1722 aa11.24□□□□□ -0.61
HLA-DMA-207ENST00000475627 POLR3GLQ9BT43 218 aa11.24□□□□□ -0.61
HLA-DMA-207ENST00000475627 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
HLA-DMA-207ENST00000475627 CCDC7Q96M83 1385 aa11.24□□□□□ -0.61
HLA-DMA-207ENST00000475627 DISP3Q9P2K9 1392 aa11.24□□□□□ -0.61
HLA-DMA-207ENST00000475627 TOM1O60784 492 aa11.23□□□□□ -0.61
HLA-DMA-207ENST00000475627 NPM2Q86SE8 214 aaKnown RBP11.23□□□□□ -0.61
HLA-DMA-207ENST00000475627 TERF2IPQ9NYB0 399 aa11.23□□□□□ -0.61
HLA-DMA-207ENST00000475627 ATP7BP35670 1465 aa11.22□□□□□ -0.61
HLA-DMA-207ENST00000475627 KIF1AQ12756 1690 aa11.22□□□□□ -0.61
HLA-DMA-207ENST00000475627 KIF7Q2M1P5 1343 aa11.22□□□□□ -0.61
HLA-DMA-207ENST00000475627 HDGFL2Q7Z4V5 671 aaPredicted RBP11.22□□□□□ -0.61
HLA-DMA-207ENST00000475627 MIER1Q8N108 512 aa11.22□□□□□ -0.61
HLA-DMA-207ENST00000475627 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
HLA-DMA-207ENST00000475627 PPIP5K1Q6PFW1 1433 aa11.21□□□□□ -0.61
HLA-DMA-207ENST00000475627 NUDT16Q96DE0 195 aaKnown RBP11.21□□□□□ -0.61
HLA-DMA-207ENST00000475627 CABP2Q9NPB3 220 aa11.21□□□□□ -0.61
HLA-DMA-207ENST00000475627 BRD4O60885 1362 aaPredicted RBP11.2□□□□□ -0.62
HLA-DMA-207ENST00000475627 POLA2Q14181 598 aa11.2□□□□□ -0.62
HLA-DMA-207ENST00000475627 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
HLA-DMA-207ENST00000475627 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
HLA-DMA-207ENST00000475627 ZNF692Q9BU19 519 aaPredicted RBP11.2□□□□□ -0.62
HLA-DMA-207ENST00000475627 XIRP1Q702N8 1843 aaKnown RBP11.2□□□□□ -0.62
HLA-DMA-207ENST00000475627 C1orf167Q5SNV9 1468 aa11.19□□□□□ -0.62
HLA-DMA-207ENST00000475627 MST1RQ04912 1400 aa11.19□□□□□ -0.62
HLA-DMA-207ENST00000475627 ANKRD36BQ8N2N9 1353 aa11.19□□□□□ -0.62
HLA-DMA-207ENST00000475627 WASHC2AQ641Q2 1341 aa11.19□□□□□ -0.62
HLA-DMA-207ENST00000475627 TOPAZ1Q8N9V7 1692 aa11.19□□□□□ -0.62
HLA-DMA-207ENST00000475627 NPHP3Q7Z494 1330 aa11.18□□□□□ -0.62
HLA-DMA-207ENST00000475627 ESCO1Q5FWF5 840 aa11.18□□□□□ -0.62
HLA-DMA-207ENST00000475627 NGDNQ8NEJ9 315 aaKnown RBP11.18□□□□□ -0.62
HLA-DMA-207ENST00000475627 SLAIN2Q9P270 581 aa11.18□□□□□ -0.62
HLA-DMA-207ENST00000475627 PHF8Q9UPP1 1060 aa11.18□□□□□ -0.62
HLA-DMA-207ENST00000475627 PLEKHG3A1L390 1219 aa11.17□□□□□ -0.62
HLA-DMA-207ENST00000475627 NUTM2FA1L443 756 aa11.16□□□□□ -0.62
HLA-DMA-207ENST00000475627 UBAP1LF5GYI3 381 aa11.16□□□□□ -0.62
HLA-DMA-207ENST00000475627 PSME1Q06323 249 aa11.16□□□□□ -0.62
HLA-DMA-207ENST00000475627 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
HLA-DMA-207ENST00000475627 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
HLA-DMA-207ENST00000475627 USP32Q8NFA0 1604 aa11.16□□□□□ -0.62
HLA-DMA-207ENST00000475627 POLR3AO14802 1390 aaPredicted RBP11.16□□□□□ -0.62
HLA-DMA-207ENST00000475627 MYOM1P52179 1685 aa11.15□□□□□ -0.62
HLA-DMA-207ENST00000475627 ZBTB47Q9UFB7 747 aaPredicted RBP11.15□□□□□ -0.62
HLA-DMA-207ENST00000475627 KNSTRNQ9Y448 316 aa11.15□□□□□ -0.62
HLA-DMA-207ENST00000475627 EDC4Q6P2E9 1401 aaKnown RBP11.15□□□□□ -0.62
HLA-DMA-207ENST00000475627 KTN1Q86UP2 1357 aaKnown RBP11.15□□□□□ -0.63
HLA-DMA-207ENST00000475627 PRR36Q9H6K5 1346 aa11.14□□□□□ -0.63
HLA-DMA-207ENST00000475627 A0A1W2PP64 1363 aa11.14□□□□□ -0.63
HLA-DMA-207ENST00000475627 NSD2O96028 1365 aa11.14□□□□□ -0.63
HLA-DMA-207ENST00000475627 ACEP12821 1306 aa11.13□□□□□ -0.63
HLA-DMA-207ENST00000475627 CGNL1Q0VF96 1302 aa11.13□□□□□ -0.63
HLA-DMA-207ENST00000475627 TTC21AQ8NDW8 1320 aa11.13□□□□□ -0.63
HLA-DMA-207ENST00000475627 C11orf95C9JLR9 678 aaPredicted RBP11.13□□□□□ -0.63
HLA-DMA-207ENST00000475627 SLC12A5Q9H2X9 1139 aa11.13□□□□□ -0.63
HLA-DMA-207ENST00000475627 USP6P35125 1406 aa11.12□□□□□ -0.63
HLA-DMA-207ENST00000475627 CPSF1Q10570 1443 aaKnown RBP11.12□□□□□ -0.63
HLA-DMA-207ENST00000475627 BRINP3Q76B58 766 aa11.12□□□□□ -0.63
HLA-DMA-207ENST00000475627 PMFBP1Q8TBY8 1022 aa11.12□□□□□ -0.63
HLA-DMA-207ENST00000475627 PANK3Q9H999 370 aa11.12□□□□□ -0.63
HLA-DMA-207ENST00000475627 NSD3Q9BZ95 1437 aa11.11□□□□□ -0.63
HLA-DMA-207ENST00000475627 AKAP12Q02952 1782 aa11.11□□□□□ -0.63
HLA-DMA-207ENST00000475627 DDX10Q13206 875 aaKnown RBP11.11□□□□□ -0.63
HLA-DMA-207ENST00000475627 ORAI2Q96SN7 254 aa11.11□□□□□ -0.63
HLA-DMA-207ENST00000475627 MON2Q7Z3U7 1717 aa11.11□□□□□ -0.63
HLA-DMA-207ENST00000475627 ARHGEF10O15013 1369 aa11.11□□□□□ -0.63
HLA-DMA-207ENST00000475627 ROBO1Q9Y6N7 1651 aa11.11□□□□□ -0.63
HLA-DMA-207ENST00000475627 AHDC1Q5TGY3 1603 aaPredicted RBP11.1□□□□□ -0.63
HLA-DMA-207ENST00000475627 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
HLA-DMA-207ENST00000475627 ZBTB12Q9Y330 459 aaPredicted RBP11.1□□□□□ -0.63
HLA-DMA-207ENST00000475627 SBNO1A3KN83 1393 aa11.1□□□□□ -0.63
HLA-DMA-207ENST00000475627 NPC1L1Q9UHC9 1359 aa11.1□□□□□ -0.63
HLA-DMA-207ENST00000475627 RGPD8O14715 1765 aaPredicted RBP11.1□□□□□ -0.63
HLA-DMA-207ENST00000475627 NHSL1Q5SYE7 1610 aa11.09□□□□□ -0.63
HLA-DMA-207ENST00000475627 FOXO3O43524 673 aa11.09□□□□□ -0.63
HLA-DMA-207ENST00000475627 PIP4K2BP78356 416 aa11.09□□□□□ -0.63
HLA-DMA-207ENST00000475627 CD163L1Q9NR16 1453 aa11.08□□□□□ -0.64
HLA-DMA-207ENST00000475627 RIOK3O14730 519 aaKnown RBP11.08□□□□□ -0.64
HLA-DMA-207ENST00000475627 PAK3O75914 559 aaPredicted RBP11.08□□□□□ -0.64
HLA-DMA-207ENST00000475627 KRT28Q7Z3Y7 464 aa11.08□□□□□ -0.64
HLA-DMA-207ENST00000475627 TNS3Q68CZ2 1445 aa11.08□□□□□ -0.64
HLA-DMA-207ENST00000475627 NRKQ7Z2Y5 1582 aa11.07□□□□□ -0.64
HLA-DMA-207ENST00000475627 ANP32CO43423 234 aa11.07□□□□□ -0.64
HLA-DMA-207ENST00000475627 ZC3H15Q8WU90 426 aaKnown RBP11.07□□□□□ -0.64
HLA-DMA-207ENST00000475627 LRRC59Q96AG4 307 aaKnown RBP11.07□□□□□ -0.64
HLA-DMA-207ENST00000475627 SOS2Q07890 1332 aaPredicted RBP11.07□□□□□ -0.64
HLA-DMA-207ENST00000475627 TTC21BQ7Z4L5 1316 aa11.07□□□□□ -0.64
HLA-DMA-207ENST00000475627 PXDNQ92626 1479 aa11.06□□□□□ -0.64
HLA-DMA-207ENST00000475627 NLRP13Q86W25 1043 aa11.06□□□□□ -0.64
HLA-DMA-207ENST00000475627 COG3Q96JB2 828 aa11.06□□□□□ -0.64
HLA-DMA-207ENST00000475627 ZMYND15Q9H091 742 aa11.06□□□□□ -0.64
HLA-DMA-207ENST00000475627 RYDENQ9NUL5 291 aaKnown RBP11.06□□□□□ -0.64
HLA-DMA-207ENST00000475627 KIF20BQ96Q89 1820 aa11.05□□□□□ -0.64
HLA-DMA-207ENST00000475627 PHLPP1O60346 1717 aa11.05□□□□□ -0.64
HLA-DMA-207ENST00000475627 SSH2Q76I76 1423 aa11.05□□□□□ -0.64
HLA-DMA-207ENST00000475627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.05□□□□□ -0.64
HLA-DMA-207ENST00000475627 ABTB2Q8N961 1025 aa11.05□□□□□ -0.64
HLA-DMA-207ENST00000475627 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms