RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 USP17L2Q6R6M4 530 aa7.79□□□□□ -1.16
SRGAP3-205ENST00000475560 USP17L1Q7RTZ2 530 aa7.79□□□□□ -1.16
SRGAP3-205ENST00000475560 PLEKHM2Q8IWE5 1019 aa7.79□□□□□ -1.16
SRGAP3-205ENST00000475560 FAM177A1Q8N128 213 aaPredicted RBP7.79□□□□□ -1.16
SRGAP3-205ENST00000475560 PER1O15534 1290 aaPredicted RBP7.78□□□□□ -1.16
SRGAP3-205ENST00000475560 TCF3P15923 654 aa7.78□□□□□ -1.16
SRGAP3-205ENST00000475560 FAM69CQ0P6D2 419 aa7.78□□□□□ -1.16
SRGAP3-205ENST00000475560 GRIPAP1Q4V328 841 aa7.78□□□□□ -1.16
SRGAP3-205ENST00000475560 CLP1Q92989 425 aaKnown RBP7.78□□□□□ -1.16
SRGAP3-205ENST00000475560 CDCA7Q9BWT1 371 aaPredicted RBP7.78□□□□□ -1.16
SRGAP3-205ENST00000475560 PPP4R3BQ5MIZ7 849 aa7.77□□□□□ -1.17
SRGAP3-205ENST00000475560 LARP1Q6PKG0 1096 aaKnown RBP7.77□□□□□ -1.17
SRGAP3-205ENST00000475560 FAM200AQ8TCP9 573 aa7.77□□□□□ -1.17
SRGAP3-205ENST00000475560 GIPC2Q8TF65 315 aa7.77□□□□□ -1.17
SRGAP3-205ENST00000475560 SYMPKQ92797 1274 aaKnown RBP7.77□□□□□ -1.17
SRGAP3-205ENST00000475560 MKRN1Q9UHC7 482 aaKnown RBP7.77□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L5A8MUK1 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L15C9J2P7 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L10C9JJH3 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L13C9JLJ4 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L12C9JPN9 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L11C9JVI0 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L21D6R901 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L18D6R9N7 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L22D6RA61 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L17D6RBQ6 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L19D6RCP7 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L20D6RJB6 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 SERPINB4P48594 390 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 USP17L24Q0WX57 530 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 PTK7Q13308 1070 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 CRTC2Q53ET0 693 aaPredicted RBP7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 GPR153Q6NV75 609 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 ERBB3P21860 1342 aa7.76□□□□□ -1.17
SRGAP3-205ENST00000475560 ANKRD33BA6NCL7 494 aa7.75□□□□□ -1.17
SRGAP3-205ENST00000475560 ZBBXA8MT70 800 aa7.75□□□□□ -1.17
SRGAP3-205ENST00000475560 FBXO45P0C2W1 286 aa7.75□□□□□ -1.17
SRGAP3-205ENST00000475560 ZNF326Q5BKZ1 582 aaKnown RBP7.75□□□□□ -1.17
SRGAP3-205ENST00000475560 DEPDC4Q8N2C3 294 aa7.75□□□□□ -1.17
SRGAP3-205ENST00000475560 BIN2Q9UBW5 565 aaPredicted RBP7.75□□□□□ -1.17
SRGAP3-205ENST00000475560 LHX6Q9UPM6 363 aa7.75□□□□□ -1.17
SRGAP3-205ENST00000475560 RASA1P20936 1047 aa7.74□□□□□ -1.17
SRGAP3-205ENST00000475560 ATP2B4P23634 1241 aa7.74□□□□□ -1.17
SRGAP3-205ENST00000475560 FUT2Q10981 343 aa7.74□□□□□ -1.17
SRGAP3-205ENST00000475560 SWT1Q5T5J6 900 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-205ENST00000475560 NPAS4Q8IUM7 802 aa7.74□□□□□ -1.17
SRGAP3-205ENST00000475560 DRC1Q96MC2 740 aa7.74□□□□□ -1.17
SRGAP3-205ENST00000475560 PSDA5PKW4 1024 aaPredicted RBP7.73□□□□□ -1.17
SRGAP3-205ENST00000475560 VAMP1P23763 118 aa7.73□□□□□ -1.17
SRGAP3-205ENST00000475560 ATP6V1AP38606 617 aa7.73□□□□□ -1.17
SRGAP3-205ENST00000475560 DESI1Q6ICB0 168 aa7.73□□□□□ -1.17
SRGAP3-205ENST00000475560 FAM174AQ8TBP5 190 aa7.73□□□□□ -1.17
SRGAP3-205ENST00000475560 C8orf37Q96NL8 207 aa7.73□□□□□ -1.17
SRGAP3-205ENST00000475560 ATP5J2-PTCD1G3V325 749 aa7.72□□□□□ -1.17
SRGAP3-205ENST00000475560 PROX2Q3B8N5 592 aa7.72□□□□□ -1.17
SRGAP3-205ENST00000475560 LYPD8Q6UX82 237 aa7.72□□□□□ -1.17
SRGAP3-205ENST00000475560 CCDC125Q86Z20 511 aa7.72□□□□□ -1.17
SRGAP3-205ENST00000475560 ANKMY2Q8IV38 441 aa7.72□□□□□ -1.17
SRGAP3-205ENST00000475560 VARS2Q5ST30 1063 aaKnown RBP7.71□□□□□ -1.18
SRGAP3-205ENST00000475560 RETREG3Q86VR2 466 aa7.71□□□□□ -1.18
SRGAP3-205ENST00000475560 KIAA1468Q9P260 1216 aa7.71□□□□□ -1.18
SRGAP3-205ENST00000475560 LZTS3O60299 673 aaPredicted RBP7.7□□□□□ -1.18
SRGAP3-205ENST00000475560 SCNN1AP37088 669 aa7.7□□□□□ -1.18
SRGAP3-205ENST00000475560 HDGFP51858 240 aaKnown RBP7.7□□□□□ -1.18
SRGAP3-205ENST00000475560 NCOA4Q13772 614 aa7.7□□□□□ -1.18
SRGAP3-205ENST00000475560 SWI5Q1ZZU3 235 aa7.7□□□□□ -1.18
SRGAP3-205ENST00000475560 C1orf216Q8TAB5 229 aa7.7□□□□□ -1.18
SRGAP3-205ENST00000475560 SREK1Q8WXA9 508 aaKnown RBP7.7□□□□□ -1.18
SRGAP3-205ENST00000475560 CEP126Q9P2H0 1117 aa7.7□□□□□ -1.18
SRGAP3-205ENST00000475560 FKBPLQ9UIM3 349 aa7.7□□□□□ -1.18
SRGAP3-205ENST00000475560 ZNF687Q8N1G0 1237 aa7.69□□□□□ -1.18
SRGAP3-205ENST00000475560 PHTF2Q8N3S3 785 aa7.69□□□□□ -1.18
SRGAP3-205ENST00000475560 DPYDQ12882 1025 aa7.68□□□□□ -1.18
SRGAP3-205ENST00000475560 SLFNL1Q499Z3 407 aa7.68□□□□□ -1.18
SRGAP3-205ENST00000475560 CANXP27824 592 aaKnown RBP7.67□□□□□ -1.18
SRGAP3-205ENST00000475560 SLC4A3P48751 1232 aa7.67□□□□□ -1.18
SRGAP3-205ENST00000475560 ZC3H6P61129 1189 aaKnown RBP7.67□□□□□ -1.18
SRGAP3-205ENST00000475560 FBXO33Q7Z6M2 555 aa7.67□□□□□ -1.18
SRGAP3-205ENST00000475560 EGFL7Q9UHF1 273 aa7.67□□□□□ -1.18
SRGAP3-205ENST00000475560 CFHP08603 1231 aa7.66□□□□□ -1.18
SRGAP3-205ENST00000475560 MCCD1P59942 119 aaPredicted RBP7.66□□□□□ -1.18
SRGAP3-205ENST00000475560 TAGLNQ01995 201 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-205ENST00000475560 RNF135Q8IUD6 432 aa7.66□□□□□ -1.18
SRGAP3-205ENST00000475560 OGFOD1Q8N543 542 aa7.66□□□□□ -1.18
SRGAP3-205ENST00000475560 ZC3H4Q9UPT8 1303 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-205ENST00000475560 KCNH2Q12809 1159 aa7.65□□□□□ -1.18
SRGAP3-205ENST00000475560 MAP7D1Q3KQU3 841 aa7.65□□□□□ -1.18
SRGAP3-205ENST00000475560 TAS1R3Q7RTX0 852 aa7.65□□□□□ -1.18
SRGAP3-205ENST00000475560 PLPP7Q8NBV4 271 aa7.65□□□□□ -1.18
SRGAP3-205ENST00000475560 ICMTO60725 284 aa7.64□□□□□ -1.19
SRGAP3-205ENST00000475560 EML3Q32P44 896 aa7.64□□□□□ -1.19
SRGAP3-205ENST00000475560 Q3C1V9 767 aa7.64□□□□□ -1.19
SRGAP3-205ENST00000475560 MORN1Q5T089 497 aa7.64□□□□□ -1.19
SRGAP3-205ENST00000475560 ZNF592Q92610 1267 aa7.64□□□□□ -1.19
SRGAP3-205ENST00000475560 KCNH8Q96L42 1107 aa7.64□□□□□ -1.19
SRGAP3-205ENST00000475560 CHIC2Q9UKJ5 165 aa7.64□□□□□ -1.19
SRGAP3-205ENST00000475560 ABL1P00519 1130 aa7.63□□□□□ -1.19
SRGAP3-205ENST00000475560 F12P00748 615 aaPredicted RBP7.63□□□□□ -1.19
SRGAP3-205ENST00000475560 CLDN10P78369 228 aa7.63□□□□□ -1.19
SRGAP3-205ENST00000475560 NAALADL2Q58DX5 795 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms