RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 NPC1L1Q9UHC9 1359 aa28.04■■■□□ 2.08
NPM3-204ENST00000474993 MON2Q7Z3U7 1717 aa28.04■■■□□ 2.08
NPM3-204ENST00000474993 SSH2Q76I76 1423 aa28.03■■■□□ 2.08
NPM3-204ENST00000474993 SBNO1A3KN83 1393 aa28.03■■■□□ 2.08
NPM3-204ENST00000474993 ROBO1Q9Y6N7 1651 aa28.03■■■□□ 2.08
NPM3-204ENST00000474993 SOS2Q07890 1332 aaPredicted RBP28.02■■■□□ 2.08
NPM3-204ENST00000474993 XPCQ01831 940 aaPredicted RBP28.01■■■□□ 2.07
NPM3-204ENST00000474993 AMER1Q5JTC6 1135 aaPredicted RBP28.01■■■□□ 2.07
NPM3-204ENST00000474993 ABTB2Q8N961 1025 aa27.99■■■□□ 2.07
NPM3-204ENST00000474993 DDX17Q92841 729 aaKnown RBP27.99■■■□□ 2.07
NPM3-204ENST00000474993 PXDNQ92626 1479 aa27.98■■■□□ 2.07
NPM3-204ENST00000474993 FYB1O15117 783 aa27.98■■■□□ 2.07
NPM3-204ENST00000474993 ANP32CO43423 234 aa27.98■■■□□ 2.07
NPM3-204ENST00000474993 AHDC1Q5TGY3 1603 aaPredicted RBP27.97■■■□□ 2.07
NPM3-204ENST00000474993 NHSL1Q5SYE7 1610 aa27.96■■■□□ 2.07
NPM3-204ENST00000474993 LRRC59Q96AG4 307 aaKnown RBP27.96■■■□□ 2.07
NPM3-204ENST00000474993 COG3Q96JB2 828 aa27.96■■■□□ 2.07
NPM3-204ENST00000474993 NRKQ7Z2Y5 1582 aa27.95■■■□□ 2.07
NPM3-204ENST00000474993 CC2D1BQ5T0F9 858 aaKnown RBP27.95■■■□□ 2.06
NPM3-204ENST00000474993 LMOD2Q6P5Q4 547 aa27.95■■■□□ 2.06
NPM3-204ENST00000474993 NLRP13Q86W25 1043 aa27.95■■■□□ 2.06
NPM3-204ENST00000474993 NME9Q86XW9 330 aa27.95■■■□□ 2.06
NPM3-204ENST00000474993 ARHGEF10O15013 1369 aa27.95■■■□□ 2.06
NPM3-204ENST00000474993 SPATA31A3Q5VYP0 1347 aa27.94■■■□□ 2.06
NPM3-204ENST00000474993 TNS3Q68CZ2 1445 aa27.93■■■□□ 2.06
NPM3-204ENST00000474993 NLRP6P59044 892 aa27.93■■■□□ 2.06
NPM3-204ENST00000474993 RALBP1Q15311 655 aa27.93■■■□□ 2.06
NPM3-204ENST00000474993 MORC1Q86VD1 984 aa27.93■■■□□ 2.06
NPM3-204ENST00000474993 GGNBP2Q9H3C7 697 aa27.93■■■□□ 2.06
NPM3-204ENST00000474993 USP31Q70CQ4 1352 aa27.93■■■□□ 2.06
NPM3-204ENST00000474993 TRPM3Q9HCF6 1732 aaPredicted RBP27.89■■■□□ 2.06
NPM3-204ENST00000474993 CNGB1Q14028 1251 aaPredicted RBP27.89■■■□□ 2.06
NPM3-204ENST00000474993 PRKRIP1Q9H875 184 aaPredicted RBP27.87■■■□□ 2.05
NPM3-204ENST00000474993 KIF20BQ96Q89 1820 aa27.87■■■□□ 2.05
NPM3-204ENST00000474993 PHLPP1O60346 1717 aa27.85■■■□□ 2.05
NPM3-204ENST00000474993 NUTM2GQ5VZR2 741 aa27.85■■■□□ 2.05
NPM3-204ENST00000474993 OVOS2A0A0J9YW53 1432 aa27.84■■■□□ 2.05
NPM3-204ENST00000474993 OVOS2Q6IE36 1432 aa27.84■■■□□ 2.05
NPM3-204ENST00000474993 KCNH5Q8NCM2 988 aa27.84■■■□□ 2.05
NPM3-204ENST00000474993 ZRANB1Q9UGI0 708 aa27.84■■■□□ 2.05
NPM3-204ENST00000474993 PARD3Q8TEW0 1356 aa27.84■■■□□ 2.05
NPM3-204ENST00000474993 PIK3C2AO00443 1686 aa27.83■■■□□ 2.05
NPM3-204ENST00000474993 ALS2Q96Q42 1657 aa27.82■■■□□ 2.04
NPM3-204ENST00000474993 FBXO41Q8TF61 875 aa27.81■■■□□ 2.04
NPM3-204ENST00000474993 USP19O94966 1318 aa27.8■■■□□ 2.04
NPM3-204ENST00000474993 ANKRD26Q9UPS8 1709 aa27.79■■■□□ 2.04
NPM3-204ENST00000474993 COL16A1Q07092 1604 aaPredicted RBP27.79■■■□□ 2.04
NPM3-204ENST00000474993 USP54Q70EL1 1684 aa27.78■■■□□ 2.04
NPM3-204ENST00000474993 AATKQ6ZMQ8 1374 aa27.77■■■□□ 2.04
NPM3-204ENST00000474993 MYBBP1AQ9BQG0 1328 aaKnown RBP27.77■■■□□ 2.04
NPM3-204ENST00000474993 TNNT2P45379 298 aaPredicted RBP27.77■■■□□ 2.04
NPM3-204ENST00000474993 HAP1P54257 671 aaPredicted RBP27.77■■■□□ 2.04
NPM3-204ENST00000474993 GCP02774 474 aa27.76■■■□□ 2.03
NPM3-204ENST00000474993 HSPA1LP34931 641 aa27.76■■■□□ 2.03
NPM3-204ENST00000474993 PNPLA6Q8IY17 1366 aa27.75■■■□□ 2.03
NPM3-204ENST00000474993 JCADQ9P266 1359 aa27.75■■■□□ 2.03
NPM3-204ENST00000474993 MED1Q15648 1581 aaPredicted RBP27.75■■■□□ 2.03
NPM3-204ENST00000474993 PPP2R1AP30153 589 aa27.73■■■□□ 2.03
NPM3-204ENST00000474993 SLIT3O75094 1523 aa27.72■■■□□ 2.03
NPM3-204ENST00000474993 SOX12O15370 315 aa27.72■■■□□ 2.03
NPM3-204ENST00000474993 PLEKHG5O94827 1062 aa27.71■■■□□ 2.03
NPM3-204ENST00000474993 CABLES1Q8TDN4 633 aa27.69■■■□□ 2.02
NPM3-204ENST00000474993 COL22A1Q8NFW1 1626 aaPredicted RBP27.68■■■□□ 2.02
NPM3-204ENST00000474993 MIER1Q8N108 512 aa27.67■■■□□ 2.02
NPM3-204ENST00000474993 CFAP53Q96M91 514 aa27.67■■■□□ 2.02
NPM3-204ENST00000474993 POLKQ9UBT6 870 aa27.67■■■□□ 2.02
NPM3-204ENST00000474993 KIF24Q5T7B8 1368 aa27.67■■■□□ 2.02
NPM3-204ENST00000474993 SPATA31A6Q5VVP1 1343 aa27.67■■■□□ 2.02
NPM3-204ENST00000474993 AMPHP49418 695 aa27.66■■■□□ 2.02
NPM3-204ENST00000474993 MTHFSP49914 203 aa27.66■■■□□ 2.02
NPM3-204ENST00000474993 MARF1Q9Y4F3 1742 aaKnown RBP27.65■■■□□ 2.02
NPM3-204ENST00000474993 CCER2I3L3R5 266 aa27.65■■■□□ 2.02
NPM3-204ENST00000474993 RRS1Q15050 365 aaKnown RBP27.65■■■□□ 2.02
NPM3-204ENST00000474993 CPDO75976 1380 aa27.64■■■□□ 2.02
NPM3-204ENST00000474993 PPM1GO15355 546 aaPredicted RBP27.64■■■□□ 2.02
NPM3-204ENST00000474993 ARHGEF25Q86VW2 580 aa27.64■■■□□ 2.02
NPM3-204ENST00000474993 SHPRHQ149N8 1683 aa27.64■■■□□ 2.02
NPM3-204ENST00000474993 MAP3K19Q56UN5 1328 aa27.64■■■□□ 2.01
NPM3-204ENST00000474993 NFAT5O94916 1531 aa27.63■■■□□ 2.01
NPM3-204ENST00000474993 FBLN1P23142 703 aa27.63■■■□□ 2.01
NPM3-204ENST00000474993 ZC3H6P61129 1189 aaKnown RBP27.63■■■□□ 2.01
NPM3-204ENST00000474993 RTL1A6NKG5 1358 aa27.62■■■□□ 2.01
NPM3-204ENST00000474993 EMILIN1Q9Y6C2 1016 aa27.62■■■□□ 2.01
NPM3-204ENST00000474993 PHRF1Q9P1Y6 1649 aaKnown RBP27.62■■■□□ 2.01
NPM3-204ENST00000474993 SMG6Q86US8 1419 aaKnown RBP27.61■■■□□ 2.01
NPM3-204ENST00000474993 ZBTB7CA1YPR0 619 aa27.6■■■□□ 2.01
NPM3-204ENST00000474993 PRDM11Q9NQV5 511 aa27.6■■■□□ 2.01
NPM3-204ENST00000474993 FLT4P35916 1363 aa27.6■■■□□ 2.01
NPM3-204ENST00000474993 CRYBG1Q9Y4K1 1723 aa27.59■■■□□ 2.01
NPM3-204ENST00000474993 IP6K1Q92551 441 aa27.59■■■□□ 2.01
NPM3-204ENST00000474993 NUTM2BA6NNL0 878 aaPredicted RBP27.58■■■□□ 2.01
NPM3-204ENST00000474993 NUTM2EB1AL46 878 aaPredicted RBP27.58■■■□□ 2.01
NPM3-204ENST00000474993 NUTM2AQ8IVF1 878 aaPredicted RBP27.58■■■□□ 2.01
NPM3-204ENST00000474993 KIAA0232Q92628 1395 aa27.58■■■□□ 2.01
NPM3-204ENST00000474993 MRS2Q9HD23 443 aa27.57■■■□□ 2
NPM3-204ENST00000474993 INSRP06213 1382 aa27.57■■■□□ 2
NPM3-204ENST00000474993 CDK12Q9NYV4 1490 aaPredicted RBP27.57■■■□□ 2
NPM3-204ENST00000474993 MAP2P11137 1827 aaKnown RBP27.56■■■□□ 2
NPM3-204ENST00000474993 HOXC9P31274 260 aa27.56■■■□□ 2
NPM3-204ENST00000474993 ABCC6O95255 1503 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms