RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 CABP2Q9NPB3 220 aa5.76□□□□□ -1.49
GAPVD1-216ENST00000474637 ARHGEF10O15013 1369 aa5.75□□□□□ -1.49
GAPVD1-216ENST00000474637 TNS3Q68CZ2 1445 aa5.75□□□□□ -1.49
GAPVD1-216ENST00000474637 PMFBP1Q8TBY8 1022 aa5.75□□□□□ -1.49
GAPVD1-216ENST00000474637 TESK2Q96S53 571 aa5.75□□□□□ -1.49
GAPVD1-216ENST00000474637 PNPLA6Q8IY17 1366 aa5.75□□□□□ -1.49
GAPVD1-216ENST00000474637 TRPM3Q9HCF6 1732 aaPredicted RBP5.75□□□□□ -1.49
GAPVD1-216ENST00000474637 MED1Q15648 1581 aaPredicted RBP5.75□□□□□ -1.49
GAPVD1-216ENST00000474637 CACNB1Q02641 598 aaPredicted RBP5.75□□□□□ -1.49
GAPVD1-216ENST00000474637 DDX17Q92841 729 aaKnown RBP5.75□□□□□ -1.49
GAPVD1-216ENST00000474637 ZNF692Q9BU19 519 aaPredicted RBP5.75□□□□□ -1.49
GAPVD1-216ENST00000474637 ACEP12821 1306 aa5.74□□□□□ -1.49
GAPVD1-216ENST00000474637 SPATA31A3Q5VYP0 1347 aa5.74□□□□□ -1.49
GAPVD1-216ENST00000474637 CABP1Q9NZU7 370 aa5.74□□□□□ -1.49
GAPVD1-216ENST00000474637 SUPT16HQ9Y5B9 1047 aaKnown RBP5.74□□□□□ -1.49
GAPVD1-216ENST00000474637 ALS2Q96Q42 1657 aa5.73□□□□□ -1.49
GAPVD1-216ENST00000474637 AKAP12Q02952 1782 aa5.73□□□□□ -1.49
GAPVD1-216ENST00000474637 HSPA5P11021 654 aaKnown RBP5.73□□□□□ -1.49
GAPVD1-216ENST00000474637 HDGFL2Q7Z4V5 671 aaPredicted RBP5.73□□□□□ -1.49
GAPVD1-216ENST00000474637 XPCQ01831 940 aaPredicted RBP5.73□□□□□ -1.49
GAPVD1-216ENST00000474637 MEX3CQ5U5Q3 659 aaKnown RBP5.73□□□□□ -1.49
GAPVD1-216ENST00000474637 TERF2IPQ9NYB0 399 aa5.73□□□□□ -1.49
GAPVD1-216ENST00000474637 DISP3Q9P2K9 1392 aa5.72□□□□□ -1.49
GAPVD1-216ENST00000474637 ANP32CO43423 234 aa5.72□□□□□ -1.49
GAPVD1-216ENST00000474637 PAK3O75914 559 aaPredicted RBP5.72□□□□□ -1.49
GAPVD1-216ENST00000474637 USP6P35125 1406 aa5.72□□□□□ -1.49
GAPVD1-216ENST00000474637 CPSF1Q10570 1443 aaKnown RBP5.72□□□□□ -1.49
GAPVD1-216ENST00000474637 TTC21AQ8NDW8 1320 aa5.72□□□□□ -1.49
GAPVD1-216ENST00000474637 MON2Q7Z3U7 1717 aa5.72□□□□□ -1.49
GAPVD1-216ENST00000474637 TMC1Q8TDI8 760 aa5.72□□□□□ -1.49
GAPVD1-216ENST00000474637 MARF1Q9Y4F3 1742 aaKnown RBP5.71□□□□□ -1.49
GAPVD1-216ENST00000474637 KTN1Q86UP2 1357 aaKnown RBP5.71□□□□□ -1.49
GAPVD1-216ENST00000474637 LMOD2Q6P5Q4 547 aa5.71□□□□□ -1.5
GAPVD1-216ENST00000474637 TSHZ2Q9NRE2 1034 aa5.71□□□□□ -1.5
GAPVD1-216ENST00000474637 LRP6O75581 1613 aa5.71□□□□□ -1.5
GAPVD1-216ENST00000474637 ABCA3Q99758 1704 aa5.71□□□□□ -1.5
GAPVD1-216ENST00000474637 NRKQ7Z2Y5 1582 aa5.71□□□□□ -1.5
GAPVD1-216ENST00000474637 EDC4Q6P2E9 1401 aaKnown RBP5.71□□□□□ -1.5
GAPVD1-216ENST00000474637 NUTM2BA6NNL0 878 aaPredicted RBP5.71□□□□□ -1.5
GAPVD1-216ENST00000474637 NUTM2EB1AL46 878 aaPredicted RBP5.71□□□□□ -1.5
GAPVD1-216ENST00000474637 HAP1P54257 671 aaPredicted RBP5.71□□□□□ -1.5
GAPVD1-216ENST00000474637 NUTM2AQ8IVF1 878 aaPredicted RBP5.71□□□□□ -1.5
GAPVD1-216ENST00000474637 ANKRD36BQ8N2N9 1353 aa5.7□□□□□ -1.5
GAPVD1-216ENST00000474637 SSH2Q76I76 1423 aa5.7□□□□□ -1.5
GAPVD1-216ENST00000474637 NLRP13Q86W25 1043 aa5.7□□□□□ -1.5
GAPVD1-216ENST00000474637 CD163L1Q9NR16 1453 aa5.7□□□□□ -1.5
GAPVD1-216ENST00000474637 TTC21BQ7Z4L5 1316 aa5.7□□□□□ -1.5
GAPVD1-216ENST00000474637 CRYBG1Q9Y4K1 1723 aa5.7□□□□□ -1.5
GAPVD1-216ENST00000474637 USP54Q70EL1 1684 aa5.7□□□□□ -1.5
GAPVD1-216ENST00000474637 CCER2I3L3R5 266 aa5.7□□□□□ -1.5
GAPVD1-216ENST00000474637 ZNF772Q68DY9 489 aaPredicted RBP5.7□□□□□ -1.5
GAPVD1-216ENST00000474637 ABTB2Q8N961 1025 aa5.7□□□□□ -1.5
GAPVD1-216ENST00000474637 SLC12A5Q9H2X9 1139 aa5.7□□□□□ -1.5
GAPVD1-216ENST00000474637 PHRF1Q9P1Y6 1649 aaKnown RBP5.69□□□□□ -1.5
GAPVD1-216ENST00000474637 MYOM1P52179 1685 aa5.69□□□□□ -1.5
GAPVD1-216ENST00000474637 USP19O94966 1318 aa5.69□□□□□ -1.5
GAPVD1-216ENST00000474637 A0A1W2PP64 1363 aa5.69□□□□□ -1.5
GAPVD1-216ENST00000474637 PIK3C2AO00443 1686 aa5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 USP31Q70CQ4 1352 aa5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 COL14A1Q05707 1796 aaKnown RBP5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 ADAMTS2O95450 1211 aa5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 NGLY1Q96IV0 654 aa5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 C8orf37Q96NL8 207 aa5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 NWD2Q9ULI1 1742 aa5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 SLIT3O75094 1523 aa5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 NLRP6P59044 892 aa5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 KCNH5Q8NCM2 988 aa5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 AFF2P51816 1311 aa5.68□□□□□ -1.5
GAPVD1-216ENST00000474637 FKBP8Q14318 412 aa5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 FNBP4Q8N3X1 1017 aaPredicted RBP5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 CPDO75976 1380 aa5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 PLCH1Q4KWH8 1693 aa5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 KIF20BQ96Q89 1820 aa5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 SLIT2O94813 1529 aa5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 ABCC6O95255 1503 aa5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 SLC4A2P04920 1241 aa5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 NUTM2GQ5VZR2 741 aa5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 CABLES1Q8TDN4 633 aa5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 POLR3GLQ9BT43 218 aa5.67□□□□□ -1.5
GAPVD1-216ENST00000474637 KIF7Q2M1P5 1343 aa5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 WASHC2AQ641Q2 1341 aa5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 GCP02774 474 aa5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 PRKCSHP14314 528 aaPredicted RBP5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 PRDM11Q9NQV5 511 aa5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 FOXD4L1Q9NU39 408 aa5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 USP21Q9UK80 565 aa5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 TRPC5Q9UL62 973 aaPredicted RBP5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 ATRNO75882 1429 aa5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 NSD3Q9BZ95 1437 aa5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 CGNL1Q0VF96 1302 aa5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 UNC5CLQ8IV45 518 aa5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 COG3Q96JB2 828 aa5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 RGS17Q9UGC6 210 aaPredicted RBP5.66□□□□□ -1.5
GAPVD1-216ENST00000474637 OVOS2A0A0J9YW53 1432 aa5.65□□□□□ -1.5
GAPVD1-216ENST00000474637 OVOS2Q6IE36 1432 aa5.65□□□□□ -1.5
GAPVD1-216ENST00000474637 KIAA0232Q92628 1395 aa5.65□□□□□ -1.5
GAPVD1-216ENST00000474637 CCDC7Q96M83 1385 aa5.65□□□□□ -1.5
GAPVD1-216ENST00000474637 FAM83GA6ND36 823 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms