RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 NGDNQ8NEJ9 315 aaKnown RBP26.3■■□□□ 1.8
SSR1-204ENST00000474597 COG3Q96JB2 828 aa26.3■■□□□ 1.8
SSR1-204ENST00000474597 RBM33Q96EV2 1170 aaKnown RBP26.3■■□□□ 1.8
SSR1-204ENST00000474597 TTC21BQ7Z4L5 1316 aa26.28■■□□□ 1.8
SSR1-204ENST00000474597 MAP2P11137 1827 aaKnown RBP26.27■■□□□ 1.8
SSR1-204ENST00000474597 SMG6Q86US8 1419 aaKnown RBP26.27■■□□□ 1.8
SSR1-204ENST00000474597 PROSER2Q86WR7 435 aaPredicted RBP26.26■■□□□ 1.79
SSR1-204ENST00000474597 NEFLP07196 543 aa26.25■■□□□ 1.79
SSR1-204ENST00000474597 CCDC146Q8IYE0 955 aa26.25■■□□□ 1.79
SSR1-204ENST00000474597 PDE3BQ13370 1112 aa26.25■■□□□ 1.79
SSR1-204ENST00000474597 NUDCQ9Y266 331 aa26.25■■□□□ 1.79
SSR1-204ENST00000474597 LMTK3Q96Q04 1460 aa26.25■■□□□ 1.79
SSR1-204ENST00000474597 ZRANB1Q9UGI0 708 aa26.23■■□□□ 1.79
SSR1-204ENST00000474597 TTC21AQ8NDW8 1320 aa26.23■■□□□ 1.79
SSR1-204ENST00000474597 SUPT16HQ9Y5B9 1047 aaKnown RBP26.21■■□□□ 1.79
SSR1-204ENST00000474597 AATKQ6ZMQ8 1374 aa26.2■■□□□ 1.79
SSR1-204ENST00000474597 PPM1GO15355 546 aaPredicted RBP26.2■■□□□ 1.78
SSR1-204ENST00000474597 POLKQ9UBT6 870 aa26.2■■□□□ 1.78
SSR1-204ENST00000474597 SSH2Q76I76 1423 aa26.19■■□□□ 1.78
SSR1-204ENST00000474597 COL3A1P02461 1466 aaPredicted RBP26.19■■□□□ 1.78
SSR1-204ENST00000474597 U2AF1L5P0DN76 240 aaPredicted RBP26.18■■□□□ 1.78
SSR1-204ENST00000474597 U2AF1Q01081 240 aaKnown RBP eCLIP26.18■■□□□ 1.781e-7■□□□□ 8.3
SSR1-204ENST00000474597 PHF8Q9UPP1 1060 aa26.18■■□□□ 1.78
SSR1-204ENST00000474597 APAF1O14727 1248 aa26.17■■□□□ 1.78
SSR1-204ENST00000474597 DIAPH1O60610 1272 aaKnown RBP26.17■■□□□ 1.78
SSR1-204ENST00000474597 PNPLA6Q8IY17 1366 aa26.17■■□□□ 1.78
SSR1-204ENST00000474597 U2SURPO15042 1029 aaKnown RBP26.16■■□□□ 1.78
SSR1-204ENST00000474597 FBLN1P23142 703 aa26.16■■□□□ 1.78
SSR1-204ENST00000474597 NGEFQ8N5V2 710 aa26.16■■□□□ 1.78
SSR1-204ENST00000474597 RUNDC1Q96C34 613 aa26.16■■□□□ 1.78
SSR1-204ENST00000474597 OVOS2A0A0J9YW53 1432 aa26.16■■□□□ 1.78
SSR1-204ENST00000474597 OVOS2Q6IE36 1432 aa26.16■■□□□ 1.78
SSR1-204ENST00000474597 STRCQ7RTU9 1775 aa26.16■■□□□ 1.78
SSR1-204ENST00000474597 STRCP1A6NGW2 1772 aa26.15■■□□□ 1.78
SSR1-204ENST00000474597 ESCO1Q5FWF5 840 aa26.15■■□□□ 1.78
SSR1-204ENST00000474597 FKBP8Q14318 412 aa26.14■■□□□ 1.77
SSR1-204ENST00000474597 C19orf44Q9H6X5 657 aa26.13■■□□□ 1.77
SSR1-204ENST00000474597 EMILIN1Q9Y6C2 1016 aa26.13■■□□□ 1.77
SSR1-204ENST00000474597 CDK12Q9NYV4 1490 aaPredicted RBP26.12■■□□□ 1.77
SSR1-204ENST00000474597 RRS1Q15050 365 aaKnown RBP26.11■■□□□ 1.77
SSR1-204ENST00000474597 PIK3C2AO00443 1686 aa26.1■■□□□ 1.77
SSR1-204ENST00000474597 NCOA3Q9Y6Q9 1424 aa26.1■■□□□ 1.77
SSR1-204ENST00000474597 TMEM94Q12767 1356 aa26.09■■□□□ 1.77
SSR1-204ENST00000474597 PAK3O75914 559 aaPredicted RBP26.09■■□□□ 1.77
SSR1-204ENST00000474597 CDCA7LQ96GN5 454 aa26.09■■□□□ 1.77
SSR1-204ENST00000474597 USP31Q70CQ4 1352 aa26.09■■□□□ 1.77
SSR1-204ENST00000474597 PNNQ9H307 717 aaKnown RBP26.09■■□□□ 1.77
SSR1-204ENST00000474597 GOLGA2Q08379 1002 aa26.08■■□□□ 1.77
SSR1-204ENST00000474597 ATF3P18847 181 aa26.07■■□□□ 1.76
SSR1-204ENST00000474597 PSME1Q06323 249 aa26.07■■□□□ 1.76
SSR1-204ENST00000474597 ZNF521Q96K83 1311 aa26.07■■□□□ 1.76
SSR1-204ENST00000474597 NLRP6P59044 892 aa26.06■■□□□ 1.76
SSR1-204ENST00000474597 TCP11L2Q8N4U5 519 aa26.06■■□□□ 1.76
SSR1-204ENST00000474597 IQSEC2Q5JU85 1478 aa26.05■■□□□ 1.76
SSR1-204ENST00000474597 ABTB2Q8N961 1025 aa26.05■■□□□ 1.76
SSR1-204ENST00000474597 SOX12O15370 315 aa26.04■■□□□ 1.76
SSR1-204ENST00000474597 DCCP43146 1447 aa26.04■■□□□ 1.76
SSR1-204ENST00000474597 ORAI2Q96SN7 254 aa26.04■■□□□ 1.76
SSR1-204ENST00000474597 MAPK8IP3Q9UPT6 1336 aa26.04■■□□□ 1.76
SSR1-204ENST00000474597 KIF1AQ12756 1690 aa26.03■■□□□ 1.76
SSR1-204ENST00000474597 NEUROD2Q15784 382 aa26.03■■□□□ 1.76
SSR1-204ENST00000474597 C1orf167Q5SNV9 1468 aa26.03■■□□□ 1.76
SSR1-204ENST00000474597 USP54Q70EL1 1684 aa26.03■■□□□ 1.76
SSR1-204ENST00000474597 NEFMP07197 916 aa26.01■■□□□ 1.75
SSR1-204ENST00000474597 RRP7AQ9Y3A4 280 aaKnown RBP26.01■■□□□ 1.75
SSR1-204ENST00000474597 MSH6P52701 1360 aa26■■□□□ 1.75
SSR1-204ENST00000474597 IL13P35225 146 aa26■■□□□ 1.75
SSR1-204ENST00000474597 FCHSD2O94868 740 aa26■■□□□ 1.75
SSR1-204ENST00000474597 NUTM2GQ5VZR2 741 aa26■■□□□ 1.75
SSR1-204ENST00000474597 PLEKHF1Q96S99 279 aa26■■□□□ 1.75
SSR1-204ENST00000474597 CADPS2Q86UW7 1296 aa25.99■■□□□ 1.75
SSR1-204ENST00000474597 FOXO3O43524 673 aa25.98■■□□□ 1.75
SSR1-204ENST00000474597 NCBP3Q53F19 620 aaKnown RBP25.98■■□□□ 1.75
SSR1-204ENST00000474597 WWC1Q8IX03 1113 aa25.98■■□□□ 1.75
SSR1-204ENST00000474597 RCAN3Q9UKA8 241 aa25.98■■□□□ 1.75
SSR1-204ENST00000474597 LRRC7Q96NW7 1537 aa25.98■■□□□ 1.75
SSR1-204ENST00000474597 MARF1Q9Y4F3 1742 aaKnown RBP25.98■■□□□ 1.75
SSR1-204ENST00000474597 SLFN5Q08AF3 891 aa25.97■■□□□ 1.75
SSR1-204ENST00000474597 PEAK1Q9H792 1746 aa25.96■■□□□ 1.75
SSR1-204ENST00000474597 E9PSI1 815 aa25.96■■□□□ 1.75
SSR1-204ENST00000474597 IRX6P78412 446 aaPredicted RBP25.96■■□□□ 1.75
SSR1-204ENST00000474597 CCDC27Q2M243 656 aa25.96■■□□□ 1.75
SSR1-204ENST00000474597 MST1RQ04912 1400 aa25.96■■□□□ 1.75
SSR1-204ENST00000474597 XIRP1Q702N8 1843 aaKnown RBP25.96■■□□□ 1.75
SSR1-204ENST00000474597 MAP3K19Q56UN5 1328 aa25.96■■□□□ 1.75
SSR1-204ENST00000474597 DUSP27Q5VZP5 1158 aa25.95■■□□□ 1.75
SSR1-204ENST00000474597 AMPHP49418 695 aa25.95■■□□□ 1.74
SSR1-204ENST00000474597 SBNO1A3KN83 1393 aa25.95■■□□□ 1.74
SSR1-204ENST00000474597 RSPH6AQ9H0K4 717 aa25.94■■□□□ 1.74
SSR1-204ENST00000474597 ZNF335Q9H4Z2 1342 aaPredicted RBP25.94■■□□□ 1.74
SSR1-204ENST00000474597 HMOX1P09601 288 aa25.93■■□□□ 1.74
SSR1-204ENST00000474597 PRKAR2BP31323 418 aa25.93■■□□□ 1.74
SSR1-204ENST00000474597 DMRT2Q9Y5R5 561 aa25.93■■□□□ 1.74
SSR1-204ENST00000474597 FLT4P35916 1363 aa25.93■■□□□ 1.74
SSR1-204ENST00000474597 TMPOP42166 694 aaKnown RBP25.93■■□□□ 1.74
SSR1-204ENST00000474597 XPCQ01831 940 aaPredicted RBP25.92■■□□□ 1.74
SSR1-204ENST00000474597 EIF4A2Q14240 407 aaKnown RBP25.92■■□□□ 1.74
SSR1-204ENST00000474597 RNF123Q5XPI4 1314 aa25.92■■□□□ 1.74
SSR1-204ENST00000474597 HSP90AB2PQ58FF8 381 aa25.91■■□□□ 1.74
SSR1-204ENST00000474597 KRT28Q7Z3Y7 464 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms