RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 PSME1Q06323 249 aa12.81□□□□□ -0.36
TNFRSF9-202ENST00000474475 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
TNFRSF9-202ENST00000474475 ABCA3Q99758 1704 aa12.81□□□□□ -0.36
TNFRSF9-202ENST00000474475 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.81□□□□□ -0.36
TNFRSF9-202ENST00000474475 TULP4Q9NRJ4 1543 aa12.81□□□□□ -0.36
TNFRSF9-202ENST00000474475 PRR36Q9H6K5 1346 aa12.81□□□□□ -0.36
TNFRSF9-202ENST00000474475 TRPM3Q9HCF6 1732 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF9-202ENST00000474475 SLIT2O94813 1529 aa12.8□□□□□ -0.36
TNFRSF9-202ENST00000474475 CABLES1Q8TDN4 633 aa12.8□□□□□ -0.36
TNFRSF9-202ENST00000474475 WASLO00401 505 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF9-202ENST00000474475 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
TNFRSF9-202ENST00000474475 GJD4Q96KN9 370 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF9-202ENST00000474475 KIAA1210Q9ULL0 1709 aa12.78□□□□□ -0.36
TNFRSF9-202ENST00000474475 ARHGEF10O15013 1369 aa12.78□□□□□ -0.36
TNFRSF9-202ENST00000474475 EIF3AQ14152 1382 aaKnown RBP12.78□□□□□ -0.36
TNFRSF9-202ENST00000474475 GLI3P10071 1580 aa12.77□□□□□ -0.36
TNFRSF9-202ENST00000474475 PLCH1Q4KWH8 1693 aa12.77□□□□□ -0.36
TNFRSF9-202ENST00000474475 ALS2Q96Q42 1657 aa12.77□□□□□ -0.36
TNFRSF9-202ENST00000474475 LMOD2Q6P5Q4 547 aa12.77□□□□□ -0.37
TNFRSF9-202ENST00000474475 UNC5CLQ8IV45 518 aa12.77□□□□□ -0.37
TNFRSF9-202ENST00000474475 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
TNFRSF9-202ENST00000474475 ATAD2Q6PL18 1390 aa12.77□□□□□ -0.37
TNFRSF9-202ENST00000474475 HAP1P54257 671 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF9-202ENST00000474475 PROM2Q8N271 834 aa12.76□□□□□ -0.37
TNFRSF9-202ENST00000474475 ATP7BP35670 1465 aa12.76□□□□□ -0.37
TNFRSF9-202ENST00000474475 RALGAPBQ86X10 1494 aa12.76□□□□□ -0.37
TNFRSF9-202ENST00000474475 ITSN1Q15811 1721 aa12.75□□□□□ -0.37
TNFRSF9-202ENST00000474475 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
TNFRSF9-202ENST00000474475 NWD2Q9ULI1 1742 aa12.75□□□□□ -0.37
TNFRSF9-202ENST00000474475 GPRASP1Q5JY77 1395 aa12.74□□□□□ -0.37
TNFRSF9-202ENST00000474475 NBPF1Q3BBV0 1214 aa12.74□□□□□ -0.37
TNFRSF9-202ENST00000474475 CRYBG1Q9Y4K1 1723 aa12.74□□□□□ -0.37
TNFRSF9-202ENST00000474475 FAM83GA6ND36 823 aa12.73□□□□□ -0.37
TNFRSF9-202ENST00000474475 NGDNQ8NEJ9 315 aaKnown RBP12.73□□□□□ -0.37
TNFRSF9-202ENST00000474475 NUDT16Q96DE0 195 aaKnown RBP12.73□□□□□ -0.37
TNFRSF9-202ENST00000474475 TOPAZ1Q8N9V7 1692 aa12.73□□□□□ -0.37
TNFRSF9-202ENST00000474475 NRAPQ86VF7 1730 aa12.72□□□□□ -0.37
TNFRSF9-202ENST00000474475 VPS72Q15906 364 aa12.72□□□□□ -0.37
TNFRSF9-202ENST00000474475 CDK19Q9BWU1 502 aa12.72□□□□□ -0.37
TNFRSF9-202ENST00000474475 BRWD3Q6RI45 1802 aa12.71□□□□□ -0.38
TNFRSF9-202ENST00000474475 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF9-202ENST00000474475 COL14A1Q05707 1796 aaKnown RBP12.7□□□□□ -0.38
TNFRSF9-202ENST00000474475 L3MBTL2Q969R5 705 aa12.69□□□□□ -0.38
TNFRSF9-202ENST00000474475 POLR3AO14802 1390 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF9-202ENST00000474475 ONECUT3O60422 494 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF9-202ENST00000474475 SEPT12Q8IYM1 358 aa12.68□□□□□ -0.38
TNFRSF9-202ENST00000474475 SIN3AQ96ST3 1273 aa12.68□□□□□ -0.38
TNFRSF9-202ENST00000474475 CCDC9Q9Y3X0 531 aaKnown RBP12.68□□□□□ -0.38
TNFRSF9-202ENST00000474475 PHRF1Q9P1Y6 1649 aaKnown RBP12.68□□□□□ -0.38
TNFRSF9-202ENST00000474475 QRICH2Q9H0J4 1663 aa12.67□□□□□ -0.38
TNFRSF9-202ENST00000474475 ACEP12821 1306 aa12.67□□□□□ -0.38
TNFRSF9-202ENST00000474475 CENPJQ9HC77 1338 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF9-202ENST00000474475 PLEKHG3A1L390 1219 aa12.67□□□□□ -0.38
TNFRSF9-202ENST00000474475 BTG4Q9NY30 223 aa12.67□□□□□ -0.38
TNFRSF9-202ENST00000474475 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
TNFRSF9-202ENST00000474475 TRPM1Q7Z4N2 1603 aa12.66□□□□□ -0.38
TNFRSF9-202ENST00000474475 NBPF8Q3BBV2 869 aa12.66□□□□□ -0.38
TNFRSF9-202ENST00000474475 CCDC125Q86Z20 511 aa12.66□□□□□ -0.38
TNFRSF9-202ENST00000474475 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
TNFRSF9-202ENST00000474475 NUTM2GQ5VZR2 741 aa12.65□□□□□ -0.38
TNFRSF9-202ENST00000474475 BLMP54132 1417 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF9-202ENST00000474475 PPIP5K1Q6PFW1 1433 aa12.64□□□□□ -0.39
TNFRSF9-202ENST00000474475 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
TNFRSF9-202ENST00000474475 NEUROD1Q13562 356 aa12.64□□□□□ -0.39
TNFRSF9-202ENST00000474475 CABP2Q9NPB3 220 aa12.64□□□□□ -0.39
TNFRSF9-202ENST00000474475 PRDM11Q9NQV5 511 aa12.64□□□□□ -0.39
TNFRSF9-202ENST00000474475 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
TNFRSF9-202ENST00000474475 FAM98CQ17RN3 349 aaKnown RBP12.63□□□□□ -0.39
TNFRSF9-202ENST00000474475 NRKQ7Z2Y5 1582 aa12.63□□□□□ -0.39
TNFRSF9-202ENST00000474475 SPATA31A5Q5VU36 1347 aa12.62□□□□□ -0.39
TNFRSF9-202ENST00000474475 SPATA31A7Q8IWB4 1347 aa12.62□□□□□ -0.39
TNFRSF9-202ENST00000474475 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
TNFRSF9-202ENST00000474475 POTEHQ6S545 545 aa12.62□□□□□ -0.39
TNFRSF9-202ENST00000474475 KRT27Q7Z3Y8 459 aa12.62□□□□□ -0.39
TNFRSF9-202ENST00000474475 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
TNFRSF9-202ENST00000474475 A0A0G2JS52 829 aa12.61□□□□□ -0.39
TNFRSF9-202ENST00000474475 ZC3H6P61129 1189 aaKnown RBP12.61□□□□□ -0.39
TNFRSF9-202ENST00000474475 MYT1Q01538 1121 aa12.61□□□□□ -0.39
TNFRSF9-202ENST00000474475 ABTB2Q8N961 1025 aa12.61□□□□□ -0.39
TNFRSF9-202ENST00000474475 DEFB132Q7Z7B7 95 aa12.6□□□□□ -0.39
TNFRSF9-202ENST00000474475 USP19O94966 1318 aa12.6□□□□□ -0.39
TNFRSF9-202ENST00000474475 ROCK2O75116 1388 aaKnown RBP12.59□□□□□ -0.39
TNFRSF9-202ENST00000474475 LMO7Q8WWI1 1683 aa12.59□□□□□ -0.39
TNFRSF9-202ENST00000474475 CABP1Q9NZU7 370 aa12.59□□□□□ -0.39
TNFRSF9-202ENST00000474475 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
TNFRSF9-202ENST00000474475 SPATA31A1Q5TZJ5 1347 aa12.59□□□□□ -0.39
TNFRSF9-202ENST00000474475 CAMTA1Q9Y6Y1 1673 aa12.58□□□□□ -0.4
TNFRSF9-202ENST00000474475 USP6P35125 1406 aa12.58□□□□□ -0.4
TNFRSF9-202ENST00000474475 STRN4Q9NRL3 753 aa12.58□□□□□ -0.4
TNFRSF9-202ENST00000474475 EVC2Q86UK5 1308 aa12.58□□□□□ -0.4
TNFRSF9-202ENST00000474475 BRD4O60885 1362 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF9-202ENST00000474475 CPDO75976 1380 aa12.57□□□□□ -0.4
TNFRSF9-202ENST00000474475 EP400Q96L91 3159 aa12.57□□□□□ -0.4
TNFRSF9-202ENST00000474475 SSH2Q76I76 1423 aa12.57□□□□□ -0.4
TNFRSF9-202ENST00000474475 FAM182BQ5T319 152 aa12.57□□□□□ -0.4
TNFRSF9-202ENST00000474475 NLRP13Q86W25 1043 aa12.57□□□□□ -0.4
TNFRSF9-202ENST00000474475 GCP02774 474 aa12.56□□□□□ -0.4
TNFRSF9-202ENST00000474475 SF3B2Q13435 895 aaKnown RBP12.56□□□□□ -0.4
TNFRSF9-202ENST00000474475 PIK3C2AO00443 1686 aa12.56□□□□□ -0.4
TNFRSF9-202ENST00000474475 SLIT3O75094 1523 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms