RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 MED1Q15648 1581 aaPredicted RBP14.59□□□□□ -0.07
VANGL1-205ENST00000474344 NINLQ9Y2I6 1382 aa14.59□□□□□ -0.07
VANGL1-205ENST00000474344 PIK3C2AO00443 1686 aa14.58□□□□□ -0.07
VANGL1-205ENST00000474344 USP54Q70EL1 1684 aa14.58□□□□□ -0.07
VANGL1-205ENST00000474344 CDCA8Q53HL2 280 aa14.58□□□□□ -0.08
VANGL1-205ENST00000474344 LRP6O75581 1613 aa14.58□□□□□ -0.08
VANGL1-205ENST00000474344 ZEB1P37275 1124 aaPredicted RBP14.56□□□□□ -0.08
VANGL1-205ENST00000474344 ARHGEF10O15013 1369 aa14.56□□□□□ -0.08
VANGL1-205ENST00000474344 PHRF1Q9P1Y6 1649 aaKnown RBP14.55□□□□□ -0.08
VANGL1-205ENST00000474344 A0A1W2PP64 1363 aa14.55□□□□□ -0.08
VANGL1-205ENST00000474344 TMC1Q8TDI8 760 aa14.54□□□□□ -0.08
VANGL1-205ENST00000474344 TTC21BQ7Z4L5 1316 aa14.54□□□□□ -0.08
VANGL1-205ENST00000474344 KTN1Q86UP2 1357 aaKnown RBP14.54□□□□□ -0.08
VANGL1-205ENST00000474344 ANKRD36BQ8N2N9 1353 aa14.54□□□□□ -0.08
VANGL1-205ENST00000474344 EDC4Q6P2E9 1401 aaKnown RBP14.53□□□□□ -0.08
VANGL1-205ENST00000474344 TERF2IPQ9NYB0 399 aa14.53□□□□□ -0.08
VANGL1-205ENST00000474344 USP19O94966 1318 aa14.51□□□□□ -0.09
VANGL1-205ENST00000474344 KIF7Q2M1P5 1343 aa14.51□□□□□ -0.09
VANGL1-205ENST00000474344 TTC21AQ8NDW8 1320 aa14.51□□□□□ -0.09
VANGL1-205ENST00000474344 KIF20BQ96Q89 1820 aa14.51□□□□□ -0.09
VANGL1-205ENST00000474344 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
VANGL1-205ENST00000474344 HDGFL2Q7Z4V5 671 aaPredicted RBP14.51□□□□□ -0.09
VANGL1-205ENST00000474344 CABLES1Q8TDN4 633 aa14.5□□□□□ -0.09
VANGL1-205ENST00000474344 CARD14Q9BXL6 1004 aa14.5□□□□□ -0.09
VANGL1-205ENST00000474344 SLIT3O75094 1523 aa14.5□□□□□ -0.09
VANGL1-205ENST00000474344 USP31Q70CQ4 1352 aa14.49□□□□□ -0.09
VANGL1-205ENST00000474344 ABTB2Q8N961 1025 aa14.49□□□□□ -0.09
VANGL1-205ENST00000474344 CCDC7Q96M83 1385 aa14.48□□□□□ -0.09
VANGL1-205ENST00000474344 WASHC2AQ641Q2 1341 aa14.48□□□□□ -0.09
VANGL1-205ENST00000474344 COL18A1P39060 1754 aa14.48□□□□□ -0.09
VANGL1-205ENST00000474344 NUTM2BA6NNL0 878 aaPredicted RBP14.48□□□□□ -0.09
VANGL1-205ENST00000474344 NUTM2EB1AL46 878 aaPredicted RBP14.48□□□□□ -0.09
VANGL1-205ENST00000474344 LMOD2Q6P5Q4 547 aa14.48□□□□□ -0.09
VANGL1-205ENST00000474344 NUTM2AQ8IVF1 878 aaPredicted RBP14.48□□□□□ -0.09
VANGL1-205ENST00000474344 RGS17Q9UGC6 210 aaPredicted RBP14.48□□□□□ -0.09
VANGL1-205ENST00000474344 NWD2Q9ULI1 1742 aa14.48□□□□□ -0.09
VANGL1-205ENST00000474344 RGPD5Q99666 1765 aa14.47□□□□□ -0.09
VANGL1-205ENST00000474344 ANKRD26Q9UPS8 1709 aa14.47□□□□□ -0.09
VANGL1-205ENST00000474344 PLCH1Q4KWH8 1693 aa14.47□□□□□ -0.09
VANGL1-205ENST00000474344 NUTM2GQ5VZR2 741 aa14.47□□□□□ -0.09
VANGL1-205ENST00000474344 NLRP13Q86W25 1043 aa14.47□□□□□ -0.09
VANGL1-205ENST00000474344 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.46□□□□□ -0.09
VANGL1-205ENST00000474344 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
VANGL1-205ENST00000474344 LTN1O94822 1766 aa14.46□□□□□ -0.09
VANGL1-205ENST00000474344 COL14A1Q05707 1796 aaKnown RBP14.46□□□□□ -0.09
VANGL1-205ENST00000474344 NFAT5O94916 1531 aa14.46□□□□□ -0.1
VANGL1-205ENST00000474344 MAP2P11137 1827 aaKnown RBP14.45□□□□□ -0.1
VANGL1-205ENST00000474344 OVOS2A0A0J9YW53 1432 aa14.45□□□□□ -0.1
VANGL1-205ENST00000474344 NLRP6P59044 892 aa14.45□□□□□ -0.1
VANGL1-205ENST00000474344 OVOS2Q6IE36 1432 aa14.45□□□□□ -0.1
VANGL1-205ENST00000474344 NME9Q86XW9 330 aa14.45□□□□□ -0.1
VANGL1-205ENST00000474344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.45□□□□□ -0.1
VANGL1-205ENST00000474344 SLIT2O94813 1529 aa14.45□□□□□ -0.1
VANGL1-205ENST00000474344 NRAPQ86VF7 1730 aa14.44□□□□□ -0.1
VANGL1-205ENST00000474344 FYB1O15117 783 aa14.44□□□□□ -0.1
VANGL1-205ENST00000474344 ADAMTS2O95450 1211 aa14.44□□□□□ -0.1
VANGL1-205ENST00000474344 GCP02774 474 aa14.44□□□□□ -0.1
VANGL1-205ENST00000474344 FNBP4Q8N3X1 1017 aaPredicted RBP14.44□□□□□ -0.1
VANGL1-205ENST00000474344 PANK3Q9H999 370 aa14.44□□□□□ -0.1
VANGL1-205ENST00000474344 LMO7Q8WWI1 1683 aa14.44□□□□□ -0.1
VANGL1-205ENST00000474344 NSD3Q9BZ95 1437 aa14.43□□□□□ -0.1
VANGL1-205ENST00000474344 FAM83GA6ND36 823 aa14.43□□□□□ -0.1
VANGL1-205ENST00000474344 POLR3GLQ9BT43 218 aa14.43□□□□□ -0.1
VANGL1-205ENST00000474344 CPDO75976 1380 aa14.43□□□□□ -0.1
VANGL1-205ENST00000474344 BCL9LQ86UU0 1499 aa14.43□□□□□ -0.1
VANGL1-205ENST00000474344 PER1O15534 1290 aaPredicted RBP14.42□□□□□ -0.1
VANGL1-205ENST00000474344 C8orf37Q96NL8 207 aa14.41□□□□□ -0.1
VANGL1-205ENST00000474344 AFF2P51816 1311 aa14.41□□□□□ -0.1
VANGL1-205ENST00000474344 KIAA0232Q92628 1395 aa14.4□□□□□ -0.1
VANGL1-205ENST00000474344 PLEKHG5O94827 1062 aa14.4□□□□□ -0.1
VANGL1-205ENST00000474344 MEX3CQ5U5Q3 659 aaKnown RBP14.4□□□□□ -0.1
VANGL1-205ENST00000474344 NGLY1Q96IV0 654 aa14.4□□□□□ -0.1
VANGL1-205ENST00000474344 CAMTA1Q9Y6Y1 1673 aa14.39□□□□□ -0.11
VANGL1-205ENST00000474344 ZC3H6P61129 1189 aaKnown RBP14.39□□□□□ -0.11
VANGL1-205ENST00000474344 ARHGEF25Q86VW2 580 aa14.39□□□□□ -0.11
VANGL1-205ENST00000474344 HAP1P54257 671 aaPredicted RBP14.38□□□□□ -0.11
VANGL1-205ENST00000474344 POTEAQ6S8J7 498 aa14.38□□□□□ -0.11
VANGL1-205ENST00000474344 KCNH5Q8NCM2 988 aa14.38□□□□□ -0.11
VANGL1-205ENST00000474344 ABCC6O95255 1503 aa14.37□□□□□ -0.11
VANGL1-205ENST00000474344 AMER1Q5JTC6 1135 aaPredicted RBP14.37□□□□□ -0.11
VANGL1-205ENST00000474344 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
VANGL1-205ENST00000474344 ATRNO75882 1429 aa14.37□□□□□ -0.11
VANGL1-205ENST00000474344 CGNL1Q0VF96 1302 aa14.37□□□□□ -0.11
VANGL1-205ENST00000474344 AATKQ6ZMQ8 1374 aa14.36□□□□□ -0.11
VANGL1-205ENST00000474344 CHRNA2Q15822 529 aa14.36□□□□□ -0.11
VANGL1-205ENST00000474344 ZNF772Q68DY9 489 aaPredicted RBP14.36□□□□□ -0.11
VANGL1-205ENST00000474344 COG3Q96JB2 828 aa14.36□□□□□ -0.11
VANGL1-205ENST00000474344 UNC5CLQ8IV45 518 aa14.35□□□□□ -0.11
VANGL1-205ENST00000474344 PHF23Q9BUL5 403 aaPredicted RBP14.35□□□□□ -0.11
VANGL1-205ENST00000474344 PRDM11Q9NQV5 511 aa14.35□□□□□ -0.11
VANGL1-205ENST00000474344 USP21Q9UK80 565 aa14.35□□□□□ -0.11
VANGL1-205ENST00000474344 PEAK1Q9H792 1746 aa14.35□□□□□ -0.11
VANGL1-205ENST00000474344 RGPD2P0DJD1 1756 aa14.34□□□□□ -0.11
VANGL1-205ENST00000474344 FBLN1P23142 703 aa14.34□□□□□ -0.11
VANGL1-205ENST00000474344 BTG4Q9NY30 223 aa14.34□□□□□ -0.11
VANGL1-205ENST00000474344 AXIN2Q9Y2T1 843 aa14.34□□□□□ -0.11
VANGL1-205ENST00000474344 GLI3P10071 1580 aa14.34□□□□□ -0.11
VANGL1-205ENST00000474344 EP400Q96L91 3159 aa14.34□□□□□ -0.11
VANGL1-205ENST00000474344 NSD2O96028 1365 aa14.34□□□□□ -0.11
VANGL1-205ENST00000474344 NPC1L1Q9UHC9 1359 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms