RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 TRPM3Q9HCF6 1732 aaPredicted RBP14.39□□□□□ -0.11
CASC3-204ENST00000474190 ZNF692Q9BU19 519 aaPredicted RBP14.39□□□□□ -0.11
CASC3-204ENST00000474190 NRKQ7Z2Y5 1582 aa14.39□□□□□ -0.11
CASC3-204ENST00000474190 KTN1Q86UP2 1357 aaKnown RBP14.38□□□□□ -0.11
CASC3-204ENST00000474190 POLR3GLQ9BT43 218 aa14.38□□□□□ -0.11
CASC3-204ENST00000474190 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
CASC3-204ENST00000474190 EDC4Q6P2E9 1401 aaKnown RBP14.38□□□□□ -0.11
CASC3-204ENST00000474190 PHLPP1O60346 1717 aa14.38□□□□□ -0.11
CASC3-204ENST00000474190 PSME1Q06323 249 aa14.37□□□□□ -0.11
CASC3-204ENST00000474190 TERF2IPQ9NYB0 399 aa14.37□□□□□ -0.11
CASC3-204ENST00000474190 ITSN1Q15811 1721 aa14.37□□□□□ -0.11
CASC3-204ENST00000474190 BRD4O60885 1362 aaPredicted RBP14.36□□□□□ -0.11
CASC3-204ENST00000474190 PNPLA6Q8IY17 1366 aa14.36□□□□□ -0.11
CASC3-204ENST00000474190 TNS3Q68CZ2 1445 aa14.36□□□□□ -0.11
CASC3-204ENST00000474190 NSD3Q9BZ95 1437 aa14.36□□□□□ -0.11
CASC3-204ENST00000474190 FYB1O15117 783 aa14.36□□□□□ -0.11
CASC3-204ENST00000474190 AMER1Q5JTC6 1135 aaPredicted RBP14.36□□□□□ -0.11
CASC3-204ENST00000474190 AKAP12Q02952 1782 aa14.35□□□□□ -0.11
CASC3-204ENST00000474190 HDGFL2Q7Z4V5 671 aaPredicted RBP14.35□□□□□ -0.11
CASC3-204ENST00000474190 NME9Q86XW9 330 aa14.35□□□□□ -0.11
CASC3-204ENST00000474190 MON2Q7Z3U7 1717 aa14.35□□□□□ -0.11
CASC3-204ENST00000474190 USP31Q70CQ4 1352 aa14.34□□□□□ -0.11
CASC3-204ENST00000474190 LRP6O75581 1613 aa14.34□□□□□ -0.11
CASC3-204ENST00000474190 SRCAPQ6ZRS2 3230 aa14.34□□□□□ -0.11
CASC3-204ENST00000474190 USP19O94966 1318 aa14.34□□□□□ -0.11
CASC3-204ENST00000474190 OVOS2A0A0J9YW53 1432 aa14.33□□□□□ -0.11
CASC3-204ENST00000474190 OVOS2Q6IE36 1432 aa14.33□□□□□ -0.11
CASC3-204ENST00000474190 ALS2Q96Q42 1657 aa14.33□□□□□ -0.11
CASC3-204ENST00000474190 DDX10Q13206 875 aaKnown RBP14.33□□□□□ -0.12
CASC3-204ENST00000474190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.33□□□□□ -0.12
CASC3-204ENST00000474190 LRRC59Q96AG4 307 aaKnown RBP14.33□□□□□ -0.12
CASC3-204ENST00000474190 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.12
CASC3-204ENST00000474190 UPF1Q92900 1129 aaKnown RBP eCLIP14.32□□□□□ -0.12
CASC3-204ENST00000474190 PIK3C2AO00443 1686 aa14.32□□□□□ -0.12
CASC3-204ENST00000474190 NUTM2GQ5VZR2 741 aa14.31□□□□□ -0.12
CASC3-204ENST00000474190 CABLES1Q8TDN4 633 aa14.3□□□□□ -0.12
CASC3-204ENST00000474190 JCADQ9P266 1359 aa14.3□□□□□ -0.12
CASC3-204ENST00000474190 MARF1Q9Y4F3 1742 aaKnown RBP14.29□□□□□ -0.12
CASC3-204ENST00000474190 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
CASC3-204ENST00000474190 FBLN1P23142 703 aa14.29□□□□□ -0.12
CASC3-204ENST00000474190 ABTB2Q8N961 1025 aa14.29□□□□□ -0.12
CASC3-204ENST00000474190 GGNBP2Q9H3C7 697 aa14.29□□□□□ -0.12
CASC3-204ENST00000474190 ARHGEF10O15013 1369 aa14.29□□□□□ -0.12
CASC3-204ENST00000474190 NPC1L1Q9UHC9 1359 aa14.29□□□□□ -0.12
CASC3-204ENST00000474190 COL22A1Q8NFW1 1626 aaPredicted RBP14.29□□□□□ -0.12
CASC3-204ENST00000474190 SLIT3O75094 1523 aa14.28□□□□□ -0.12
CASC3-204ENST00000474190 CRYBG1Q9Y4K1 1723 aa14.27□□□□□ -0.12
CASC3-204ENST00000474190 USP54Q70EL1 1684 aa14.27□□□□□ -0.12
CASC3-204ENST00000474190 NLRP6P59044 892 aa14.27□□□□□ -0.13
CASC3-204ENST00000474190 CGNL1Q0VF96 1302 aa14.26□□□□□ -0.13
CASC3-204ENST00000474190 NFAT5O94916 1531 aa14.25□□□□□ -0.13
CASC3-204ENST00000474190 GCP02774 474 aa14.25□□□□□ -0.13
CASC3-204ENST00000474190 KNSTRNQ9Y448 316 aa14.25□□□□□ -0.13
CASC3-204ENST00000474190 SHPRHQ149N8 1683 aa14.25□□□□□ -0.13
CASC3-204ENST00000474190 LMOD2Q6P5Q4 547 aa14.24□□□□□ -0.13
CASC3-204ENST00000474190 NLRP13Q86W25 1043 aa14.24□□□□□ -0.13
CASC3-204ENST00000474190 NSD2O96028 1365 aa14.23□□□□□ -0.13
CASC3-204ENST00000474190 SPATA31A6Q5VVP1 1343 aa14.22□□□□□ -0.13
CASC3-204ENST00000474190 ARHGEF25Q86VW2 580 aa14.22□□□□□ -0.13
CASC3-204ENST00000474190 CPDO75976 1380 aa14.22□□□□□ -0.13
CASC3-204ENST00000474190 PARD3Q8TEW0 1356 aa14.22□□□□□ -0.13
CASC3-204ENST00000474190 FAM83GA6ND36 823 aa14.21□□□□□ -0.13
CASC3-204ENST00000474190 CC2D1BQ5T0F9 858 aaKnown RBP14.21□□□□□ -0.13
CASC3-204ENST00000474190 COG3Q96JB2 828 aa14.21□□□□□ -0.13
CASC3-204ENST00000474190 ABCA3Q99758 1704 aa14.21□□□□□ -0.14
CASC3-204ENST00000474190 AATKQ6ZMQ8 1374 aa14.21□□□□□ -0.14
CASC3-204ENST00000474190 CDK12Q9NYV4 1490 aaPredicted RBP14.2□□□□□ -0.14
CASC3-204ENST00000474190 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
CASC3-204ENST00000474190 KIAA0232Q92628 1395 aa14.2□□□□□ -0.14
CASC3-204ENST00000474190 PHRF1Q9P1Y6 1649 aaKnown RBP14.19□□□□□ -0.14
CASC3-204ENST00000474190 MAP3K19Q56UN5 1328 aa14.19□□□□□ -0.14
CASC3-204ENST00000474190 MEX3CQ5U5Q3 659 aaKnown RBP14.19□□□□□ -0.14
CASC3-204ENST00000474190 ZNF772Q68DY9 489 aaPredicted RBP14.19□□□□□ -0.14
CASC3-204ENST00000474190 POLKQ9UBT6 870 aa14.19□□□□□ -0.14
CASC3-204ENST00000474190 AXIN2Q9Y2T1 843 aa14.19□□□□□ -0.14
CASC3-204ENST00000474190 SMG6Q86US8 1419 aaKnown RBP14.18□□□□□ -0.14
CASC3-204ENST00000474190 ZC3H6P61129 1189 aaKnown RBP14.18□□□□□ -0.14
CASC3-204ENST00000474190 RRS1Q15050 365 aaKnown RBP14.18□□□□□ -0.14
CASC3-204ENST00000474190 EMILIN1Q9Y6C2 1016 aa14.18□□□□□ -0.14
CASC3-204ENST00000474190 RGS12O14924 1447 aa14.17□□□□□ -0.14
CASC3-204ENST00000474190 NUTM2BA6NNL0 878 aaPredicted RBP14.17□□□□□ -0.14
CASC3-204ENST00000474190 NUTM2EB1AL46 878 aaPredicted RBP14.17□□□□□ -0.14
CASC3-204ENST00000474190 SOX12O15370 315 aa14.17□□□□□ -0.14
CASC3-204ENST00000474190 NUTM2AQ8IVF1 878 aaPredicted RBP14.17□□□□□ -0.14
CASC3-204ENST00000474190 SLIT2O94813 1529 aa14.16□□□□□ -0.14
CASC3-204ENST00000474190 ADAMTS2O95450 1211 aa14.16□□□□□ -0.14
CASC3-204ENST00000474190 CHRNA2Q15822 529 aa14.16□□□□□ -0.14
CASC3-204ENST00000474190 MORC1Q86VD1 984 aa14.16□□□□□ -0.14
CASC3-204ENST00000474190 KCNH5Q8NCM2 988 aa14.16□□□□□ -0.14
CASC3-204ENST00000474190 PRKRIP1Q9H875 184 aaPredicted RBP14.16□□□□□ -0.14
CASC3-204ENST00000474190 KIF20BQ96Q89 1820 aa14.15□□□□□ -0.14
CASC3-204ENST00000474190 RXRBP28702 533 aa14.15□□□□□ -0.14
CASC3-204ENST00000474190 TNNT2P45379 298 aaPredicted RBP14.15□□□□□ -0.14
CASC3-204ENST00000474190 FNBP4Q8N3X1 1017 aaPredicted RBP14.15□□□□□ -0.14
CASC3-204ENST00000474190 PEAK1Q9H792 1746 aa14.15□□□□□ -0.14
CASC3-204ENST00000474190 COL18A1P39060 1754 aa14.14□□□□□ -0.15
CASC3-204ENST00000474190 LMO7Q8WWI1 1683 aa14.14□□□□□ -0.15
CASC3-204ENST00000474190 CAMTA1Q9Y6Y1 1673 aa14.14□□□□□ -0.15
CASC3-204ENST00000474190 BCL9LQ86UU0 1499 aa14.14□□□□□ -0.15
CASC3-204ENST00000474190 PPP2R1AP30153 589 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms