RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 WWC1Q8IX03 1113 aa27.53■■■□□ 2
RNF220-209ENST00000474064 FAM135BQ49AJ0 1406 aa27.53■■■□□ 2
RNF220-209ENST00000474064 NUTM2FA1L443 756 aa27.52■■■□□ 2
RNF220-209ENST00000474064 TECPR2O15040 1411 aa27.52■■■□□ 2
RNF220-209ENST00000474064 SIRT1Q96EB6 747 aa27.51■■□□□ 1.99
RNF220-209ENST00000474064 E9PSI1 815 aa27.5■■□□□ 1.99
RNF220-209ENST00000474064 PPM1GO15355 546 aaPredicted RBP27.5■■□□□ 1.99
RNF220-209ENST00000474064 TRMT2AQ8IZ69 625 aaKnown RBP27.5■■□□□ 1.99
RNF220-209ENST00000474064 ATP7BP35670 1465 aa27.49■■□□□ 1.99
RNF220-209ENST00000474064 C20orf194Q5TEA3 1177 aa27.48■■□□□ 1.99
RNF220-209ENST00000474064 CCDC61Q9Y6R9 512 aa27.48■■□□□ 1.99
RNF220-209ENST00000474064 CPS1P31327 1500 aa27.48■■□□□ 1.99
RNF220-209ENST00000474064 NGEFQ8N5V2 710 aa27.47■■□□□ 1.99
RNF220-209ENST00000474064 KNDC1Q76NI1 1749 aa27.47■■□□□ 1.99
RNF220-209ENST00000474064 MED14O60244 1454 aa27.47■■□□□ 1.99
RNF220-209ENST00000474064 NME9Q86XW9 330 aa27.47■■□□□ 1.99
RNF220-209ENST00000474064 THEMISQ8N1K5 641 aaPredicted RBP27.47■■□□□ 1.99
RNF220-209ENST00000474064 CRBNQ96SW2 442 aa27.47■■□□□ 1.99
RNF220-209ENST00000474064 USP35Q9P2H5 1018 aa27.47■■□□□ 1.99
RNF220-209ENST00000474064 ZRANB1Q9UGI0 708 aa27.47■■□□□ 1.99
RNF220-209ENST00000474064 PRR36Q9H6K5 1346 aa27.46■■□□□ 1.99
RNF220-209ENST00000474064 PTPRUQ92729 1446 aa27.44■■□□□ 1.98
RNF220-209ENST00000474064 ANKRD26Q9UPS8 1709 aa27.44■■□□□ 1.98
RNF220-209ENST00000474064 AMOTL2Q9Y2J4 779 aa27.44■■□□□ 1.98
RNF220-209ENST00000474064 NKTRP30414 1462 aaKnown RBP27.43■■□□□ 1.98
RNF220-209ENST00000474064 CPSF1Q10570 1443 aaKnown RBP27.43■■□□□ 1.98
RNF220-209ENST00000474064 KIF20BQ96Q89 1820 aa27.43■■□□□ 1.98
RNF220-209ENST00000474064 IQSEC2Q5JU85 1478 aa27.43■■□□□ 1.98
RNF220-209ENST00000474064 DIAPH1O60610 1272 aaKnown RBP27.41■■□□□ 1.98
RNF220-209ENST00000474064 EDC4Q6P2E9 1401 aaKnown RBP27.4■■□□□ 1.98
RNF220-209ENST00000474064 COL3A1P02461 1466 aaPredicted RBP27.4■■□□□ 1.98
RNF220-209ENST00000474064 POLKQ9UBT6 870 aa27.4■■□□□ 1.98
RNF220-209ENST00000474064 SLIT1O75093 1534 aa27.4■■□□□ 1.98
RNF220-209ENST00000474064 BCAR3O75815 825 aa27.4■■□□□ 1.98
RNF220-209ENST00000474064 ARHGAP23Q9P227 1491 aa27.39■■□□□ 1.98
RNF220-209ENST00000474064 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.38■■□□□ 1.97
RNF220-209ENST00000474064 TBX22Q9Y458 520 aa27.37■■□□□ 1.97
RNF220-209ENST00000474064 EMILIN1Q9Y6C2 1016 aa27.37■■□□□ 1.97
RNF220-209ENST00000474064 PDE4AP27815 886 aa27.36■■□□□ 1.97
RNF220-209ENST00000474064 PLEKHF1Q96S99 279 aa27.36■■□□□ 1.97
RNF220-209ENST00000474064 PHF23Q9BUL5 403 aaPredicted RBP27.36■■□□□ 1.97
RNF220-209ENST00000474064 CDC42BPGQ6DT37 1551 aa27.35■■□□□ 1.97
RNF220-209ENST00000474064 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.35■■□□□ 1.97
RNF220-209ENST00000474064 MAPK8IP3Q9UPT6 1336 aa27.35■■□□□ 1.97
RNF220-209ENST00000474064 COG3Q96JB2 828 aa27.34■■□□□ 1.97
RNF220-209ENST00000474064 PNPLA6Q8IY17 1366 aa27.33■■□□□ 1.97
RNF220-209ENST00000474064 TCERG1O14776 1098 aaKnown RBP27.33■■□□□ 1.97
RNF220-209ENST00000474064 WDR63Q8IWG1 891 aa27.33■■□□□ 1.97
RNF220-209ENST00000474064 ACEP12821 1306 aa27.32■■□□□ 1.96
RNF220-209ENST00000474064 UBE2Q2Q8WVN8 375 aa27.32■■□□□ 1.96
RNF220-209ENST00000474064 ZNF692Q9BU19 519 aaPredicted RBP27.32■■□□□ 1.96
RNF220-209ENST00000474064 BRPF3Q9ULD4 1205 aa27.32■■□□□ 1.96
RNF220-209ENST00000474064 RRS1Q15050 365 aaKnown RBP27.32■■□□□ 1.96
RNF220-209ENST00000474064 CCDC27Q2M243 656 aa27.32■■□□□ 1.96
RNF220-209ENST00000474064 RIMS1Q86UR5 1692 aaKnown RBP27.3■■□□□ 1.96
RNF220-209ENST00000474064 TMPOP42166 694 aaKnown RBP27.3■■□□□ 1.96
RNF220-209ENST00000474064 BACH2Q9BYV9 841 aa27.29■■□□□ 1.96
RNF220-209ENST00000474064 PMFBP1Q8TBY8 1022 aa27.29■■□□□ 1.96
RNF220-209ENST00000474064 HMOX1P09601 288 aa27.27■■□□□ 1.96
RNF220-209ENST00000474064 MAP2P11137 1827 aaKnown RBP27.27■■□□□ 1.96
RNF220-209ENST00000474064 KCNA6P17658 529 aa27.26■■□□□ 1.96
RNF220-209ENST00000474064 ADGRB2O60241 1585 aa27.26■■□□□ 1.96
RNF220-209ENST00000474064 CEP170BQ9Y4F5 1589 aaPredicted RBP27.26■■□□□ 1.95
RNF220-209ENST00000474064 MON2Q7Z3U7 1717 aa27.26■■□□□ 1.95
RNF220-209ENST00000474064 ITSN1Q15811 1721 aa27.26■■□□□ 1.95
RNF220-209ENST00000474064 RIPK4P57078 832 aa27.25■■□□□ 1.95
RNF220-209ENST00000474064 TTC21BQ7Z4L5 1316 aa27.25■■□□□ 1.95
RNF220-209ENST00000474064 PRKAR2BP31323 418 aa27.25■■□□□ 1.95
RNF220-209ENST00000474064 TRIM35Q9UPQ4 493 aa27.25■■□□□ 1.95
RNF220-209ENST00000474064 CANXP27824 592 aaKnown RBP27.24■■□□□ 1.95
RNF220-209ENST00000474064 TSR2Q969E8 191 aaKnown RBP27.24■■□□□ 1.95
RNF220-209ENST00000474064 PLEKHG3A1L390 1219 aa27.24■■□□□ 1.95
RNF220-209ENST00000474064 MYH16Q9H6N6 1097 aa27.24■■□□□ 1.95
RNF220-209ENST00000474064 FRAT1Q92837 279 aaPredicted RBP27.23■■□□□ 1.95
RNF220-209ENST00000474064 BCL2L13Q9BXK5 485 aa27.23■■□□□ 1.95
RNF220-209ENST00000474064 AKAP12Q02952 1782 aa27.23■■□□□ 1.95
RNF220-209ENST00000474064 SOX12O15370 315 aa27.23■■□□□ 1.95
RNF220-209ENST00000474064 FCHSD2O94868 740 aa27.22■■□□□ 1.95
RNF220-209ENST00000474064 GSE1Q14687 1217 aa27.22■■□□□ 1.95
RNF220-209ENST00000474064 PTCH1Q13635 1447 aa27.22■■□□□ 1.95
RNF220-209ENST00000474064 RSPH6AQ9H0K4 717 aa27.21■■□□□ 1.95
RNF220-209ENST00000474064 PNNQ9H307 717 aaKnown RBP27.21■■□□□ 1.95
RNF220-209ENST00000474064 EIF5BO60841 1220 aaKnown RBP27.2■■□□□ 1.95
RNF220-209ENST00000474064 RARSP54136 660 aaKnown RBP27.2■■□□□ 1.95
RNF220-209ENST00000474064 IL13P35225 146 aa27.2■■□□□ 1.94
RNF220-209ENST00000474064 AATKQ6ZMQ8 1374 aa27.19■■□□□ 1.94
RNF220-209ENST00000474064 ANKLE2Q86XL3 938 aa27.19■■□□□ 1.94
RNF220-209ENST00000474064 NCBP3Q53F19 620 aaKnown RBP27.19■■□□□ 1.94
RNF220-209ENST00000474064 RBM33Q96EV2 1170 aaKnown RBP27.19■■□□□ 1.94
RNF220-209ENST00000474064 NGDNQ8NEJ9 315 aaKnown RBP27.18■■□□□ 1.94
RNF220-209ENST00000474064 LRRC7Q96NW7 1537 aa27.18■■□□□ 1.94
RNF220-209ENST00000474064 USP6P35125 1406 aa27.18■■□□□ 1.94
RNF220-209ENST00000474064 MS4A1P11836 297 aa27.18■■□□□ 1.94
RNF220-209ENST00000474064 SKAP1Q86WV1 359 aa27.18■■□□□ 1.94
RNF220-209ENST00000474064 PHACTR3Q96KR7 559 aa27.18■■□□□ 1.94
RNF220-209ENST00000474064 DIP2AQ14689 1571 aa27.17■■□□□ 1.94
RNF220-209ENST00000474064 TOPAZ1Q8N9V7 1692 aa27.17■■□□□ 1.94
RNF220-209ENST00000474064 PANK1Q8TE04 598 aa27.17■■□□□ 1.94
RNF220-209ENST00000474064 CDK12Q9NYV4 1490 aaPredicted RBP27.15■■□□□ 1.94
RNF220-209ENST00000474064 EXOSC9Q06265 439 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms