RNA–Protein interactions for RNA: ENST00000473855.1

TNC-205, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 386 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-205ENST00000473855 NBPF1Q3BBV0 1214 aa9.87□□□□□ -0.83
TNC-205ENST00000473855 ESCO1Q5FWF5 840 aa9.87□□□□□ -0.83
TNC-205ENST00000473855 MEX3CQ5U5Q3 659 aaKnown RBP9.87□□□□□ -0.83
TNC-205ENST00000473855 JCADQ9P266 1359 aa9.87□□□□□ -0.83
TNC-205ENST00000473855 XIRP1Q702N8 1843 aaKnown RBP9.86□□□□□ -0.83
TNC-205ENST00000473855 SPATA31A6Q5VVP1 1343 aa9.86□□□□□ -0.83
TNC-205ENST00000473855 PSME1Q06323 249 aa9.86□□□□□ -0.83
TNC-205ENST00000473855 CARD11Q9BXL7 1154 aa9.86□□□□□ -0.83
TNC-205ENST00000473855 PLEKHH1Q9ULM0 1364 aa9.86□□□□□ -0.83
TNC-205ENST00000473855 PAK3O75914 559 aaPredicted RBP9.85□□□□□ -0.83
TNC-205ENST00000473855 POTEIP0CG38 1075 aa9.85□□□□□ -0.83
TNC-205ENST00000473855 FKBP8Q14318 412 aa9.85□□□□□ -0.83
TNC-205ENST00000473855 SBNO2Q9Y2G9 1366 aa9.85□□□□□ -0.83
TNC-205ENST00000473855 AHDC1Q5TGY3 1603 aaPredicted RBP9.85□□□□□ -0.83
TNC-205ENST00000473855 RALGAPBQ86X10 1494 aa9.85□□□□□ -0.83
TNC-205ENST00000473855 SOS2Q07890 1332 aaPredicted RBP9.84□□□□□ -0.83
TNC-205ENST00000473855 EVC2Q86UK5 1308 aa9.84□□□□□ -0.83
TNC-205ENST00000473855 ADGRB2O60241 1585 aa9.84□□□□□ -0.83
TNC-205ENST00000473855 ROBO1Q9Y6N7 1651 aa9.84□□□□□ -0.83
TNC-205ENST00000473855 SAFB2Q14151 953 aaKnown RBP eCLIP9.84□□□□□ -0.83
TNC-205ENST00000473855 MIER1Q8N108 512 aa9.84□□□□□ -0.83
TNC-205ENST00000473855 ZNF784Q8NCA9 323 aaPredicted RBP9.84□□□□□ -0.83
TNC-205ENST00000473855 PUS7Q96PZ0 661 aaKnown RBP9.84□□□□□ -0.83
TNC-205ENST00000473855 CCDC61Q9Y6R9 512 aa9.84□□□□□ -0.83
TNC-205ENST00000473855 MINK1Q8N4C8 1332 aaPredicted RBP9.83□□□□□ -0.84
TNC-205ENST00000473855 NALCNQ8IZF0 1738 aa9.83□□□□□ -0.84
TNC-205ENST00000473855 NBPF8Q3BBV2 869 aa9.83□□□□□ -0.84
TNC-205ENST00000473855 ORAI2Q96SN7 254 aa9.83□□□□□ -0.84
TNC-205ENST00000473855 PHF8Q9UPP1 1060 aa9.83□□□□□ -0.84
TNC-205ENST00000473855 ATAD2Q6PL18 1390 aa9.83□□□□□ -0.84
TNC-205ENST00000473855 RGS12O14924 1447 aa9.82□□□□□ -0.84
TNC-205ENST00000473855 CDK19Q9BWU1 502 aa9.82□□□□□ -0.84
TNC-205ENST00000473855 BRD4O60885 1362 aaPredicted RBP9.82□□□□□ -0.84
TNC-205ENST00000473855 EP400Q96L91 3159 aa9.82□□□□□ -0.84
TNC-205ENST00000473855 TULP4Q9NRJ4 1543 aa9.82□□□□□ -0.84
TNC-205ENST00000473855 FOXO3O43524 673 aa9.81□□□□□ -0.84
TNC-205ENST00000473855 SRPK2P78362 688 aaKnown RBP9.81□□□□□ -0.84
TNC-205ENST00000473855 CDCA8Q53HL2 280 aa9.81□□□□□ -0.84
TNC-205ENST00000473855 HIRIP3Q9BW71 556 aaPredicted RBP9.81□□□□□ -0.84
TNC-205ENST00000473855 TRPM1Q7Z4N2 1603 aa9.81□□□□□ -0.84
TNC-205ENST00000473855 SBNO1A3KN83 1393 aa9.8□□□□□ -0.84
TNC-205ENST00000473855 PLEKHG3A1L390 1219 aa9.8□□□□□ -0.84
TNC-205ENST00000473855 NUDT16Q96DE0 195 aaKnown RBP9.8□□□□□ -0.84
TNC-205ENST00000473855 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
TNC-205ENST00000473855 ARHGEF10O15013 1369 aa9.79□□□□□ -0.84
TNC-205ENST00000473855 NUTM2FA1L443 756 aa9.79□□□□□ -0.84
TNC-205ENST00000473855 GALR2O43603 387 aaPredicted RBP9.79□□□□□ -0.84
TNC-205ENST00000473855 PLEKHG5O94827 1062 aa9.79□□□□□ -0.84
TNC-205ENST00000473855 KRT28Q7Z3Y7 464 aa9.79□□□□□ -0.84
TNC-205ENST00000473855 NGDNQ8NEJ9 315 aaKnown RBP9.79□□□□□ -0.84
TNC-205ENST00000473855 PHF12Q96QT6 1004 aa9.79□□□□□ -0.84
TNC-205ENST00000473855 KIF1AQ12756 1690 aa9.79□□□□□ -0.84
TNC-205ENST00000473855 ARHGEF28Q8N1W1 1705 aaKnown RBP9.78□□□□□ -0.84
TNC-205ENST00000473855 FMN2Q9NZ56 1722 aa9.78□□□□□ -0.84
TNC-205ENST00000473855 POLR3AO14802 1390 aaPredicted RBP9.77□□□□□ -0.84
TNC-205ENST00000473855 NINLQ9Y2I6 1382 aa9.77□□□□□ -0.84
TNC-205ENST00000473855 PHLPP1O60346 1717 aa9.77□□□□□ -0.85
TNC-205ENST00000473855 TMF1P82094 1093 aa9.77□□□□□ -0.85
TNC-205ENST00000473855 LRP6O75581 1613 aa9.77□□□□□ -0.85
TNC-205ENST00000473855 COL16A1Q07092 1604 aaPredicted RBP9.77□□□□□ -0.85
TNC-205ENST00000473855 NHSL1Q5SYE7 1610 aa9.77□□□□□ -0.85
TNC-205ENST00000473855 SPATA31A3Q5VYP0 1347 aa9.77□□□□□ -0.85
TNC-205ENST00000473855 PNPLA6Q8IY17 1366 aa9.76□□□□□ -0.85
TNC-205ENST00000473855 LHX8Q68G74 356 aa9.76□□□□□ -0.85
TNC-205ENST00000473855 CCDC125Q86Z20 511 aa9.76□□□□□ -0.85
TNC-205ENST00000473855 ATP7BP35670 1465 aa9.76□□□□□ -0.85
TNC-205ENST00000473855 TNS3Q68CZ2 1445 aa9.75□□□□□ -0.85
TNC-205ENST00000473855 PXDNQ92626 1479 aa9.75□□□□□ -0.85
TNC-205ENST00000473855 ST20-MTHFSA0A0A6YYL1 179 aa9.75□□□□□ -0.85
TNC-205ENST00000473855 PSDA5PKW4 1024 aaPredicted RBP9.75□□□□□ -0.85
TNC-205ENST00000473855 EIF4G2P78344 907 aaKnown RBP eCLIP9.75□□□□□ -0.85
TNC-205ENST00000473855 PMFBP1Q8TBY8 1022 aa9.75□□□□□ -0.85
TNC-205ENST00000473855 TSPYL2Q9H2G4 693 aaPredicted RBP9.75□□□□□ -0.85
TNC-205ENST00000473855 PRR36Q9H6K5 1346 aa9.75□□□□□ -0.85
TNC-205ENST00000473855 USP47Q96K76 1375 aa9.75□□□□□ -0.85
TNC-205ENST00000473855 RBM6P78332 1123 aaKnown RBP9.74□□□□□ -0.85
TNC-205ENST00000473855 PLCD3Q8N3E9 789 aa9.74□□□□□ -0.85
TNC-205ENST00000473855 CABP2Q9NPB3 220 aa9.74□□□□□ -0.85
TNC-205ENST00000473855 TERF2IPQ9NYB0 399 aa9.74□□□□□ -0.85
TNC-205ENST00000473855 ACEP12821 1306 aa9.74□□□□□ -0.85
TNC-205ENST00000473855 PPIP5K1Q6PFW1 1433 aa9.73□□□□□ -0.85
TNC-205ENST00000473855 HAP1P54257 671 aaPredicted RBP9.73□□□□□ -0.85
TNC-205ENST00000473855 DDX17Q92841 729 aaKnown RBP9.73□□□□□ -0.85
TNC-205ENST00000473855 CABP1Q9NZU7 370 aa9.73□□□□□ -0.85
TNC-205ENST00000473855 SHPRHQ149N8 1683 aa9.73□□□□□ -0.85
TNC-205ENST00000473855 HDGFL2Q7Z4V5 671 aaPredicted RBP9.72□□□□□ -0.85
TNC-205ENST00000473855 NLRP13Q86W25 1043 aa9.72□□□□□ -0.85
TNC-205ENST00000473855 TESK2Q96S53 571 aa9.72□□□□□ -0.85
TNC-205ENST00000473855 TTC21AQ8NDW8 1320 aa9.72□□□□□ -0.85
TNC-205ENST00000473855 ITSN1Q15811 1721 aa9.71□□□□□ -0.85
TNC-205ENST00000473855 LMOD2Q6P5Q4 547 aa9.71□□□□□ -0.86
TNC-205ENST00000473855 QTRT2Q9H974 415 aaKnown RBP9.71□□□□□ -0.86
TNC-205ENST00000473855 QRICH2Q9H0J4 1663 aa9.71□□□□□ -0.86
TNC-205ENST00000473855 PRELPP51888 382 aa9.7□□□□□ -0.86
TNC-205ENST00000473855 XPCQ01831 940 aaPredicted RBP9.7□□□□□ -0.86
TNC-205ENST00000473855 ABTB2Q8N961 1025 aa9.7□□□□□ -0.86
TNC-205ENST00000473855 AFF2P51816 1311 aa9.7□□□□□ -0.86
TNC-205ENST00000473855 USP32Q8NFA0 1604 aa9.7□□□□□ -0.86
TNC-205ENST00000473855 USP6P35125 1406 aa9.69□□□□□ -0.86
TNC-205ENST00000473855 CPSF1Q10570 1443 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms