RNA–Protein interactions for RNA: ENST00000473515.5

SCML4-209, Transcript of Scm polycomb group protein like 4, human

TSL 2

Gene SCML4, Length 4,297 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCML4-209	ENST00000473515	DDX49	Q9Y6V7	483 aa	Known RBP	11.6	□□□□□ -0.55
SCML4-209	ENST00000473515	ZNF428	Q96B54	188 aa		11.59	□□□□□ -0.55
SCML4-209	ENST00000473515	ARID3A	Q99856	593 aa		11.59	□□□□□ -0.55
SCML4-209	ENST00000473515	WDR7	Q9Y4E6	1490 aa		11.59	□□□□□ -0.55
SCML4-209	ENST00000473515	AIMP1	Q12904	312 aa	Known RBP	11.59	□□□□□ -0.55
SCML4-209	ENST00000473515	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.59	□□□□□ -0.55
SCML4-209	ENST00000473515	TAF7L	Q5H9L4	462 aa		11.59	□□□□□ -0.55
SCML4-209	ENST00000473515	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.59	□□□□□ -0.55
SCML4-209	ENST00000473515	HDAC5	Q9UQL6	1122 aa		11.59	□□□□□ -0.55
SCML4-209	ENST00000473515	ATF3	P18847	181 aa		11.58	□□□□□ -0.56
SCML4-209	ENST00000473515	PROSER2	Q86WR7	435 aa	Predicted RBP	11.58	□□□□□ -0.56
SCML4-209	ENST00000473515	ZMYM4	Q5VZL5	1548 aa		11.58	□□□□□ -0.56
SCML4-209	ENST00000473515	TTC5	Q8N0Z6	440 aa		11.58	□□□□□ -0.56
SCML4-209	ENST00000473515	RAPGEF4	Q8WZA2	1011 aa		11.58	□□□□□ -0.56
SCML4-209	ENST00000473515	GPATCH3	Q96I76	525 aa		11.58	□□□□□ -0.56
SCML4-209	ENST00000473515	RSPH6A	Q9H0K4	717 aa		11.58	□□□□□ -0.56
SCML4-209	ENST00000473515	A2M	P01023	1474 aa		11.58	□□□□□ -0.56
SCML4-209	ENST00000473515	FCHSD2	O94868	740 aa		11.58	□□□□□ -0.56
SCML4-209	ENST00000473515	EVA1C	P58658	441 aa		11.58	□□□□□ -0.56
SCML4-209	ENST00000473515	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.58	□□□□□ -0.56
SCML4-209	ENST00000473515	ST18	O60284	1047 aa		11.57	□□□□□ -0.56
SCML4-209	ENST00000473515	SLC4A2	P04920	1241 aa		11.57	□□□□□ -0.56
SCML4-209	ENST00000473515	KDM2B	Q8NHM5	1336 aa		11.57	□□□□□ -0.56
SCML4-209	ENST00000473515	MVP	Q14764	893 aa	Known RBP	11.57	□□□□□ -0.56
SCML4-209	ENST00000473515	MIS18A	Q9NYP9	233 aa		11.57	□□□□□ -0.56
SCML4-209	ENST00000473515	RARS	P54136	660 aa	Known RBP	11.56	□□□□□ -0.56
SCML4-209	ENST00000473515	SSH1	Q8WYL5	1049 aa		11.56	□□□□□ -0.56
SCML4-209	ENST00000473515	CROCC2	H7BZ55	1655 aa		11.56	□□□□□ -0.56
SCML4-209	ENST00000473515	IGHD	P01880	384 aa		11.56	□□□□□ -0.56
SCML4-209	ENST00000473515	C8orf34	Q49A92	452 aa		11.56	□□□□□ -0.56
SCML4-209	ENST00000473515	GAS2L2	Q8NHY3	880 aa		11.56	□□□□□ -0.56
SCML4-209	ENST00000473515	PTMS	P20962	102 aa		11.56	□□□□□ -0.56
SCML4-209	ENST00000473515	NEXN	Q0ZGT2	675 aa		11.56	□□□□□ -0.56
SCML4-209	ENST00000473515	GPRASP1	Q5JY77	1395 aa		11.55	□□□□□ -0.56
SCML4-209	ENST00000473515	TRAK2	O60296	914 aa		11.55	□□□□□ -0.56
SCML4-209	ENST00000473515	AAMP	Q13685	434 aa		11.55	□□□□□ -0.56
SCML4-209	ENST00000473515	WASL	O00401	505 aa	Predicted RBP	11.55	□□□□□ -0.56
SCML4-209	ENST00000473515	NFE2L2	Q16236	605 aa		11.55	□□□□□ -0.56
SCML4-209	ENST00000473515	MCM10	Q7L590	875 aa		11.55	□□□□□ -0.56
SCML4-209	ENST00000473515	ANO2	Q9NQ90	1003 aa		11.55	□□□□□ -0.56
SCML4-209	ENST00000473515	ABCC2	Q92887	1545 aa		11.55	□□□□□ -0.56
SCML4-209	ENST00000473515	FAM43A	Q8N2R8	423 aa		11.55	□□□□□ -0.56
SCML4-209	ENST00000473515	TMEM57	Q8N5G2	664 aa		11.55	□□□□□ -0.56
SCML4-209	ENST00000473515	CFAP65	Q6ZU64	1925 aa	Known RBP	11.54	□□□□□ -0.56
SCML4-209	ENST00000473515	SYTL4	Q96C24	671 aa	Predicted RBP	11.54	□□□□□ -0.56
SCML4-209	ENST00000473515	CARD14	Q9BXL6	1004 aa		11.54	□□□□□ -0.56
SCML4-209	ENST00000473515	KDM5D	Q9BY66	1539 aa		11.54	□□□□□ -0.56
SCML4-209	ENST00000473515	ANKLE2	Q86XL3	938 aa		11.54	□□□□□ -0.56
SCML4-209	ENST00000473515	AMOTL2	Q9Y2J4	779 aa		11.54	□□□□□ -0.56
SCML4-209	ENST00000473515	ZNF518A	Q6AHZ1	1483 aa		11.53	□□□□□ -0.56
SCML4-209	ENST00000473515	UBTFL1	P0CB47	393 aa	Predicted RBP	11.53	□□□□□ -0.56
SCML4-209	ENST00000473515	HDGFL1	Q5TGJ6	251 aa		11.53	□□□□□ -0.56
SCML4-209	ENST00000473515	REC8	O95072	547 aa		11.52	□□□□□ -0.56
SCML4-209	ENST00000473515	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.52	□□□□□ -0.56
SCML4-209	ENST00000473515		E9PCH4	1651 aa		11.52	□□□□□ -0.57
SCML4-209	ENST00000473515	DIAPH3	Q9NSV4	1193 aa		11.52	□□□□□ -0.57
SCML4-209	ENST00000473515	NKTR	P30414	1462 aa	Known RBP	11.52	□□□□□ -0.57
SCML4-209	ENST00000473515	PLEKHH1	Q9ULM0	1364 aa		11.52	□□□□□ -0.57
SCML4-209	ENST00000473515	FYB1	O15117	783 aa		11.52	□□□□□ -0.57
SCML4-209	ENST00000473515	CCDC30	Q5VVM6	783 aa		11.52	□□□□□ -0.57
SCML4-209	ENST00000473515	ADCY10	Q96PN6	1610 aa		11.52	□□□□□ -0.57
SCML4-209	ENST00000473515	IFIT2	P09913	472 aa	Known RBP	11.51	□□□□□ -0.57
SCML4-209	ENST00000473515	HSP90B1	P14625	803 aa	Known RBP	11.51	□□□□□ -0.57
SCML4-209	ENST00000473515	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.51	□□□□□ -0.57
SCML4-209	ENST00000473515	SURF6	O75683	361 aa	Known RBP	11.51	□□□□□ -0.57
SCML4-209	ENST00000473515	DDX58	O95786	925 aa	Known RBP	11.51	□□□□□ -0.57
SCML4-209	ENST00000473515	CT47B1	P0C2W7	299 aa	Predicted RBP	11.51	□□□□□ -0.57
SCML4-209	ENST00000473515	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.51	□□□□□ -0.57
SCML4-209	ENST00000473515	RIC3	Q7Z5B4	369 aa		11.51	□□□□□ -0.57
SCML4-209	ENST00000473515	ZC3H6	P61129	1189 aa	Known RBP	11.51	□□□□□ -0.57
SCML4-209	ENST00000473515	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.5	□□□□□ -0.57
SCML4-209	ENST00000473515	USHBP1	Q8N6Y0	703 aa		11.5	□□□□□ -0.57
SCML4-209	ENST00000473515	NINL	Q9Y2I6	1382 aa		11.5	□□□□□ -0.57
SCML4-209	ENST00000473515	FAM83G	A6ND36	823 aa		11.5	□□□□□ -0.57
SCML4-209	ENST00000473515	INTS3	Q68E01	1043 aa	Known RBP	11.5	□□□□□ -0.57
SCML4-209	ENST00000473515	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.5	□□□□□ -0.57
SCML4-209	ENST00000473515	MCM4	P33991	863 aa		11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	ZRANB1	Q9UGI0	708 aa		11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	TRPM1	Q7Z4N2	1603 aa		11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	POGZ	Q7Z3K3	1410 aa		11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	ABCC10	Q5T3U5	1492 aa		11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	FOXO3	O43524	673 aa		11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	CDC45	O75419	566 aa		11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	GNAI3	P08754	354 aa		11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	MRE11	P49959	708 aa		11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	GTF2E1	P29083	439 aa	Predicted RBP	11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	MCTP1	Q6DN14	999 aa		11.49	□□□□□ -0.57
SCML4-209	ENST00000473515	TRIM27	P14373	513 aa		11.48	□□□□□ -0.57
SCML4-209	ENST00000473515	TBC1D2	Q9BYX2	928 aa		11.48	□□□□□ -0.57
SCML4-209	ENST00000473515	ASXL1	Q8IXJ9	1541 aa		11.48	□□□□□ -0.57
SCML4-209	ENST00000473515	TNN	Q9UQP3	1299 aa		11.48	□□□□□ -0.57
SCML4-209	ENST00000473515	NCKAP5L	Q9HCH0	1330 aa		11.48	□□□□□ -0.57
SCML4-209	ENST00000473515	GNL2	Q13823	731 aa	Known RBP	11.47	□□□□□ -0.57
SCML4-209	ENST00000473515	PCDHB15	Q9Y5E8	787 aa		11.47	□□□□□ -0.57
SCML4-209	ENST00000473515	GCC1	Q96CN9	775 aa		11.47	□□□□□ -0.57
SCML4-209	ENST00000473515	STRN4	Q9NRL3	753 aa		11.47	□□□□□ -0.57
SCML4-209	ENST00000473515	CHD1L	Q86WJ1	897 aa		11.47	□□□□□ -0.57
SCML4-209	ENST00000473515	ARHGEF5	Q12774	1597 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms