RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 MYO15BQ96JP2 1530 aa8.79□□□□□ -1
RTF1-203ENST00000473214 ZBTB24O43167 697 aaPredicted RBP8.78□□□□□ -1
RTF1-203ENST00000473214 SNRPBP14678 240 aaKnown RBP8.78□□□□□ -1
RTF1-203ENST00000473214 SMPD1P17405 629 aa8.78□□□□□ -1
RTF1-203ENST00000473214 PDE4CQ08493 712 aa8.78□□□□□ -1
RTF1-203ENST00000473214 KRI1Q8N9T8 703 aaKnown RBP8.78□□□□□ -1
RTF1-203ENST00000473214 ATP13A2Q9NQ11 1180 aa8.78□□□□□ -1
RTF1-203ENST00000473214 SERPINA10Q9UK55 444 aa8.78□□□□□ -1
RTF1-203ENST00000473214 SCRIBQ14160 1630 aa8.77□□□□□ -1.01
RTF1-203ENST00000473214 IRF5Q13568 498 aa8.77□□□□□ -1.01
RTF1-203ENST00000473214 GRIPAP1Q4V328 841 aa8.77□□□□□ -1.01
RTF1-203ENST00000473214 SNIP1Q8TAD8 396 aaKnown RBP8.77□□□□□ -1.01
RTF1-203ENST00000473214 ZNF777Q9ULD5 760 aaPredicted RBP8.77□□□□□ -1.01
RTF1-203ENST00000473214 WNT7AO00755 349 aa8.76□□□□□ -1.01
RTF1-203ENST00000473214 TERTO14746 1132 aaKnown RBP8.76□□□□□ -1.01
RTF1-203ENST00000473214 MMP16P51512 607 aa8.76□□□□□ -1.01
RTF1-203ENST00000473214 PDE4DQ08499 809 aa8.74□□□□□ -1.01
RTF1-203ENST00000473214 Q3C1V9 767 aa8.74□□□□□ -1.01
RTF1-203ENST00000473214 GPIHBP1Q8IV16 184 aa8.74□□□□□ -1.01
RTF1-203ENST00000473214 TRIM47Q96LD4 638 aa8.74□□□□□ -1.01
RTF1-203ENST00000473214 CUX2O14529 1486 aa8.74□□□□□ -1.01
RTF1-203ENST00000473214 CD46P15529 392 aa8.73□□□□□ -1.01
RTF1-203ENST00000473214 TRIM32Q13049 653 aa8.73□□□□□ -1.01
RTF1-203ENST00000473214 FAM117AQ9C073 453 aa8.73□□□□□ -1.01
RTF1-203ENST00000473214 SENP2Q9HC62 589 aa8.73□□□□□ -1.01
RTF1-203ENST00000473214 J3QL48 77 aa8.72□□□□□ -1.01
RTF1-203ENST00000473214 MRGPRX2Q96LB1 330 aa8.72□□□□□ -1.01
RTF1-203ENST00000473214 CWC22Q9HCG8 908 aaKnown RBP8.72□□□□□ -1.01
RTF1-203ENST00000473214 TRIM66O15016 1216 aa8.7□□□□□ -1.02
RTF1-203ENST00000473214 DXOO77932 396 aaKnown RBP8.7□□□□□ -1.02
RTF1-203ENST00000473214 CCDC125Q86Z20 511 aa8.7□□□□□ -1.02
RTF1-203ENST00000473214 HPS1Q92902 700 aa8.7□□□□□ -1.02
RTF1-203ENST00000473214 USB1Q9BQ65 265 aaKnown RBP8.7□□□□□ -1.02
RTF1-203ENST00000473214 AMOTL2Q9Y2J4 779 aa8.7□□□□□ -1.02
RTF1-203ENST00000473214 ARID4BQ4LE39 1312 aaPredicted RBP8.7□□□□□ -1.02
RTF1-203ENST00000473214 PATL2C9JE40 543 aaKnown RBP8.69□□□□□ -1.02
RTF1-203ENST00000473214 KDM4AO75164 1064 aa8.69□□□□□ -1.02
RTF1-203ENST00000473214 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
RTF1-203ENST00000473214 PROSER2Q86WR7 435 aaPredicted RBP8.68□□□□□ -1.02
RTF1-203ENST00000473214 KIFC2Q96AC6 838 aa8.67□□□□□ -1.02
RTF1-203ENST00000473214 USP46P62068 366 aa8.66□□□□□ -1.02
RTF1-203ENST00000473214 REPIN1Q9BWE0 567 aaKnown RBP8.66□□□□□ -1.02
RTF1-203ENST00000473214 BCCIPQ9P287 314 aaKnown RBP eCLIP8.66□□□□□ -1.02
RTF1-203ENST00000473214 PLEKHG3A1L390 1219 aa8.65□□□□□ -1.02
RTF1-203ENST00000473214 IRF6O14896 467 aa8.65□□□□□ -1.02
RTF1-203ENST00000473214 HLA-CQ95604 372 aa8.65□□□□□ -1.02
RTF1-203ENST00000473214 DDRGK1Q96HY6 314 aa8.65□□□□□ -1.02
RTF1-203ENST00000473214 SKOR1P84550 965 aa8.64□□□□□ -1.03
RTF1-203ENST00000473214 HOXA2O43364 376 aa8.63□□□□□ -1.03
RTF1-203ENST00000473214 WNT7BP56706 349 aa8.63□□□□□ -1.03
RTF1-203ENST00000473214 MDM2Q00987 491 aaPredicted RBP8.63□□□□□ -1.03
RTF1-203ENST00000473214 RC3H1Q5TC82 1133 aaKnown RBP8.63□□□□□ -1.03
RTF1-203ENST00000473214 CERS3Q8IU89 383 aa8.63□□□□□ -1.03
RTF1-203ENST00000473214 SLC16A10Q8TF71 515 aa8.63□□□□□ -1.03
RTF1-203ENST00000473214 ZNF592Q92610 1267 aa8.63□□□□□ -1.03
RTF1-203ENST00000473214 PSMD1Q99460 953 aa8.63□□□□□ -1.03
RTF1-203ENST00000473214 ERCC6Q03468 1493 aa8.63□□□□□ -1.03
RTF1-203ENST00000473214 CANXP27824 592 aaKnown RBP8.62□□□□□ -1.03
RTF1-203ENST00000473214 CCDC24Q8N4L8 307 aa8.62□□□□□ -1.03
RTF1-203ENST00000473214 MINK1Q8N4C8 1332 aaPredicted RBP8.61□□□□□ -1.03
RTF1-203ENST00000473214 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
RTF1-203ENST00000473214 NEFLP07196 543 aa8.61□□□□□ -1.03
RTF1-203ENST00000473214 CCDC27Q2M243 656 aa8.61□□□□□ -1.03
RTF1-203ENST00000473214 NXF1Q9UBU9 619 aaKnown RBP8.61□□□□□ -1.03
RTF1-203ENST00000473214 ZCCHC6Q5VYS8 1495 aaKnown RBP8.6□□□□□ -1.03
RTF1-203ENST00000473214 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
RTF1-203ENST00000473214 KCNA1Q09470 495 aa8.6□□□□□ -1.03
RTF1-203ENST00000473214 MCM6Q14566 821 aa8.6□□□□□ -1.03
RTF1-203ENST00000473214 JUNDP17535 347 aa8.59□□□□□ -1.03
RTF1-203ENST00000473214 GMPRP36959 345 aa8.59□□□□□ -1.03
RTF1-203ENST00000473214 GUCA2AQ02747 115 aa8.59□□□□□ -1.03
RTF1-203ENST00000473214 TICAM2Q86XR7 235 aa8.59□□□□□ -1.03
RTF1-203ENST00000473214 ALDH1A1P00352 501 aa8.58□□□□□ -1.04
RTF1-203ENST00000473214 ZSCAN1Q8NBB4 408 aa8.58□□□□□ -1.04
RTF1-203ENST00000473214 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
RTF1-203ENST00000473214 ACIN1Q9UKV3 1341 aaKnown RBP8.57□□□□□ -1.04
RTF1-203ENST00000473214 FNBP4Q8N3X1 1017 aaPredicted RBP8.57□□□□□ -1.04
RTF1-203ENST00000473214 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
RTF1-203ENST00000473214 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
RTF1-203ENST00000473214 GPCPD1Q9NPB8 672 aa8.57□□□□□ -1.04
RTF1-203ENST00000473214 FAM217BQ9NTX9 383 aaPredicted RBP8.57□□□□□ -1.04
RTF1-203ENST00000473214 NESP48681 1621 aa8.57□□□□□ -1.04
RTF1-203ENST00000473214 LOC100996750A0A140TA64 210 aa8.56□□□□□ -1.04
RTF1-203ENST00000473214 UNCXA6NJT0 531 aa8.56□□□□□ -1.04
RTF1-203ENST00000473214 SIAH2O43255 324 aa8.56□□□□□ -1.04
RTF1-203ENST00000473214 CLSTN1O94985 981 aa8.56□□□□□ -1.04
RTF1-203ENST00000473214 CC2D2BQ6DHV5 1058 aa8.56□□□□□ -1.04
RTF1-203ENST00000473214 PTCRAQ6ISU1 281 aaPredicted RBP8.56□□□□□ -1.04
RTF1-203ENST00000473214 NPAS3Q8IXF0 933 aa8.56□□□□□ -1.04
RTF1-203ENST00000473214 IRF7Q92985 503 aa8.56□□□□□ -1.04
RTF1-203ENST00000473214 KRTAP4-6Q9BYQ5 205 aa8.56□□□□□ -1.04
RTF1-203ENST00000473214 BRPF3Q9ULD4 1205 aa8.56□□□□□ -1.04
RTF1-203ENST00000473214 PPP1R15AO75807 674 aaPredicted RBP8.55□□□□□ -1.04
RTF1-203ENST00000473214 CLCN1P35523 988 aa8.55□□□□□ -1.04
RTF1-203ENST00000473214 TRIM46Q7Z4K8 759 aa8.55□□□□□ -1.04
RTF1-203ENST00000473214 RETREG3Q86VR2 466 aa8.55□□□□□ -1.04
RTF1-203ENST00000473214 POM121Q96HA1 1249 aa8.55□□□□□ -1.04
RTF1-203ENST00000473214 DCAF1Q9Y4B6 1507 aa8.54□□□□□ -1.04
RTF1-203ENST00000473214 SMARCA5O60264 1052 aaPredicted RBP8.54□□□□□ -1.04
RTF1-203ENST00000473214 BMP1P13497 986 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms