RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 NPHP3Q7Z494 1330 aa9.43□□□□□ -0.9
HDAC1-205ENST00000472928 XPCQ01831 940 aaPredicted RBP9.43□□□□□ -0.9
HDAC1-205ENST00000472928 UNC5CLQ8IV45 518 aa9.43□□□□□ -0.9
HDAC1-205ENST00000472928 BRWD3Q6RI45 1802 aa9.42□□□□□ -0.9
HDAC1-205ENST00000472928 CLTCL1P53675 1640 aa9.42□□□□□ -0.9
HDAC1-205ENST00000472928 HFM1A2PYH4 1435 aa9.42□□□□□ -0.9
HDAC1-205ENST00000472928 NKX1-1Q15270 411 aaPredicted RBP9.42□□□□□ -0.9
HDAC1-205ENST00000472928 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
HDAC1-205ENST00000472928 FOXO3O43524 673 aa9.41□□□□□ -0.9
HDAC1-205ENST00000472928 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
HDAC1-205ENST00000472928 SEPT12Q8IYM1 358 aa9.41□□□□□ -0.9
HDAC1-205ENST00000472928 RAB3GAP2Q9H2M9 1393 aa9.4□□□□□ -0.9
HDAC1-205ENST00000472928 PSDA5PKW4 1024 aaPredicted RBP9.4□□□□□ -0.9
HDAC1-205ENST00000472928 STK25O00506 426 aa9.4□□□□□ -0.9
HDAC1-205ENST00000472928 HRCP23327 699 aa9.4□□□□□ -0.9
HDAC1-205ENST00000472928 SGIP1Q9BQI5 828 aa9.4□□□□□ -0.9
HDAC1-205ENST00000472928 NAIPQ13075 1403 aa9.39□□□□□ -0.91
HDAC1-205ENST00000472928 SPATA31A3Q5VYP0 1347 aa9.39□□□□□ -0.91
HDAC1-205ENST00000472928 ONECUT3O60422 494 aaPredicted RBP9.39□□□□□ -0.91
HDAC1-205ENST00000472928 PYGBP11216 843 aa9.39□□□□□ -0.91
HDAC1-205ENST00000472928 CHADLQ6NUI6 762 aa9.39□□□□□ -0.91
HDAC1-205ENST00000472928 USP32Q8NFA0 1604 aa9.38□□□□□ -0.91
HDAC1-205ENST00000472928 SF3B2Q13435 895 aaKnown RBP9.38□□□□□ -0.91
HDAC1-205ENST00000472928 VPS72Q15906 364 aa9.38□□□□□ -0.91
HDAC1-205ENST00000472928 LRPPRCP42704 1394 aaKnown RBP9.37□□□□□ -0.91
HDAC1-205ENST00000472928 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.36□□□□□ -0.91
HDAC1-205ENST00000472928 NUTM2FA1L443 756 aa9.36□□□□□ -0.91
HDAC1-205ENST00000472928 GTPBP6O43824 516 aaPredicted RBP9.36□□□□□ -0.91
HDAC1-205ENST00000472928 KRT27Q7Z3Y8 459 aa9.36□□□□□ -0.91
HDAC1-205ENST00000472928 ZFP91Q96JP5 570 aaPredicted RBP9.36□□□□□ -0.91
HDAC1-205ENST00000472928 TECPR2O15040 1411 aa9.36□□□□□ -0.91
HDAC1-205ENST00000472928 KIF1BO60333 1816 aa9.35□□□□□ -0.91
HDAC1-205ENST00000472928 WAPLQ7Z5K2 1190 aa9.35□□□□□ -0.91
HDAC1-205ENST00000472928 CCER1Q8TC90 406 aaPredicted RBP9.35□□□□□ -0.91
HDAC1-205ENST00000472928 FARP1Q9Y4F1 1045 aaPredicted RBP9.35□□□□□ -0.91
HDAC1-205ENST00000472928 PLEKHH1Q9ULM0 1364 aa9.35□□□□□ -0.91
HDAC1-205ENST00000472928 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
HDAC1-205ENST00000472928 CCDC144AA2RUR9 1427 aa9.34□□□□□ -0.91
HDAC1-205ENST00000472928 TNS3Q68CZ2 1445 aa9.34□□□□□ -0.91
HDAC1-205ENST00000472928 BAG6P46379 1132 aa9.34□□□□□ -0.91
HDAC1-205ENST00000472928 CABLES1Q8TDN4 633 aa9.34□□□□□ -0.91
HDAC1-205ENST00000472928 BCL11BQ9C0K0 894 aaPredicted RBP9.34□□□□□ -0.91
HDAC1-205ENST00000472928 PLCH1Q4KWH8 1693 aa9.34□□□□□ -0.91
HDAC1-205ENST00000472928 DHX57Q6P158 1386 aaKnown RBP9.34□□□□□ -0.91
HDAC1-205ENST00000472928 NWD2Q9ULI1 1742 aa9.34□□□□□ -0.92
HDAC1-205ENST00000472928 PPLO60437 1756 aa9.33□□□□□ -0.92
HDAC1-205ENST00000472928 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
HDAC1-205ENST00000472928 R3HDM1Q15032 1099 aaKnown RBP9.33□□□□□ -0.92
HDAC1-205ENST00000472928 KRT28Q7Z3Y7 464 aa9.33□□□□□ -0.92
HDAC1-205ENST00000472928 KIF1AQ12756 1690 aa9.32□□□□□ -0.92
HDAC1-205ENST00000472928 DISP2A7MBM2 1401 aa9.32□□□□□ -0.92
HDAC1-205ENST00000472928 FMN2Q9NZ56 1722 aa9.32□□□□□ -0.92
HDAC1-205ENST00000472928 FAM83GA6ND36 823 aa9.32□□□□□ -0.92
HDAC1-205ENST00000472928 STK24Q9Y6E0 443 aa9.32□□□□□ -0.92
HDAC1-205ENST00000472928 ABCC11Q96J66 1382 aa9.32□□□□□ -0.92
HDAC1-205ENST00000472928 ADGRF5Q8IZF2 1346 aa9.31□□□□□ -0.92
HDAC1-205ENST00000472928 ABCA3Q99758 1704 aa9.31□□□□□ -0.92
HDAC1-205ENST00000472928 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
HDAC1-205ENST00000472928 STK26Q9P289 416 aa9.31□□□□□ -0.92
HDAC1-205ENST00000472928 CCDC9Q9Y3X0 531 aaKnown RBP9.31□□□□□ -0.92
HDAC1-205ENST00000472928 SBNO1A3KN83 1393 aa9.3□□□□□ -0.92
HDAC1-205ENST00000472928 FAM98CQ17RN3 349 aaKnown RBP9.3□□□□□ -0.92
HDAC1-205ENST00000472928 PELP1Q8IZL8 1130 aaKnown RBP9.3□□□□□ -0.92
HDAC1-205ENST00000472928 NRAPQ86VF7 1730 aa9.3□□□□□ -0.92
HDAC1-205ENST00000472928 NRXN1Q9ULB1 1477 aa9.29□□□□□ -0.92
HDAC1-205ENST00000472928 RGPD1P0DJD0 1748 aa9.29□□□□□ -0.92
HDAC1-205ENST00000472928 KNDC1Q76NI1 1749 aa9.29□□□□□ -0.92
HDAC1-205ENST00000472928 PRKAR2AP13861 404 aaKnown RBP9.29□□□□□ -0.92
HDAC1-205ENST00000472928 FAM182BQ5T319 152 aa9.29□□□□□ -0.92
HDAC1-205ENST00000472928 PHF8Q9UPP1 1060 aa9.29□□□□□ -0.92
HDAC1-205ENST00000472928 TNS1Q9HBL0 1735 aaKnown RBP9.28□□□□□ -0.92
HDAC1-205ENST00000472928 ARHGEF10O15013 1369 aa9.28□□□□□ -0.92
HDAC1-205ENST00000472928 A0A0G2JS52 829 aa9.28□□□□□ -0.92
HDAC1-205ENST00000472928 YY1P25490 414 aa9.28□□□□□ -0.92
HDAC1-205ENST00000472928 FXR2P51116 673 aaKnown RBP eCLIP9.28□□□□□ -0.923e-6■□□□□ 8
HDAC1-205ENST00000472928 MYT1Q01538 1121 aa9.28□□□□□ -0.92
HDAC1-205ENST00000472928 EZH2Q15910 746 aaKnown RBP9.28□□□□□ -0.92
HDAC1-205ENST00000472928 TMEM132EQ6IEE7 984 aa9.28□□□□□ -0.92
HDAC1-205ENST00000472928 ZNF467Q7Z7K2 595 aaPredicted RBP9.28□□□□□ -0.92
HDAC1-205ENST00000472928 CAMKK2Q96RR4 588 aa9.28□□□□□ -0.92
HDAC1-205ENST00000472928 THSD7AQ9UPZ6 1657 aa9.27□□□□□ -0.93
HDAC1-205ENST00000472928 PSME1Q06323 249 aa9.27□□□□□ -0.93
HDAC1-205ENST00000472928 BTG4Q9NY30 223 aa9.27□□□□□ -0.93
HDAC1-205ENST00000472928 SPATA31E1Q6ZUB1 1445 aa9.27□□□□□ -0.93
HDAC1-205ENST00000472928 YTHDC2Q9H6S0 1430 aaKnown RBP9.27□□□□□ -0.93
HDAC1-205ENST00000472928 SPATA31A5Q5VU36 1347 aa9.27□□□□□ -0.93
HDAC1-205ENST00000472928 SPATA31A7Q8IWB4 1347 aa9.27□□□□□ -0.93
HDAC1-205ENST00000472928 PIK3C2GO75747 1445 aa9.26□□□□□ -0.93
HDAC1-205ENST00000472928 ZEB1P37275 1124 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-205ENST00000472928 RGPD8O14715 1765 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-205ENST00000472928 IFT172Q9UG01 1749 aa9.25□□□□□ -0.93
HDAC1-205ENST00000472928 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
HDAC1-205ENST00000472928 LMOD2Q6P5Q4 547 aa9.25□□□□□ -0.93
HDAC1-205ENST00000472928 SIRT1Q96EB6 747 aa9.25□□□□□ -0.93
HDAC1-205ENST00000472928 RYDENQ9NUL5 291 aaKnown RBP9.25□□□□□ -0.93
HDAC1-205ENST00000472928 CCDC61Q9Y6R9 512 aa9.25□□□□□ -0.93
HDAC1-205ENST00000472928 ANKRD30BQ9BXX2 1392 aa9.24□□□□□ -0.93
HDAC1-205ENST00000472928 PDAP1Q13442 181 aaKnown RBP9.24□□□□□ -0.93
HDAC1-205ENST00000472928 TRPM3Q9HCF6 1732 aaPredicted RBP9.24□□□□□ -0.93
HDAC1-205ENST00000472928 CLSPNQ9HAW4 1339 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms