RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 CDCA8Q53HL2 280 aa14.67□□□□□ -0.06
SMARCD3-208ENST00000472789 TOPAZ1Q8N9V7 1692 aa14.66□□□□□ -0.06
SMARCD3-208ENST00000472789 PNPLA6Q8IY17 1366 aa14.66□□□□□ -0.06
SMARCD3-208ENST00000472789 RGS12O14924 1447 aa14.66□□□□□ -0.06
SMARCD3-208ENST00000472789 SPATA31A3Q5VYP0 1347 aa14.66□□□□□ -0.06
SMARCD3-208ENST00000472789 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
SMARCD3-208ENST00000472789 SLC12A5Q9H2X9 1139 aa14.65□□□□□ -0.06
SMARCD3-208ENST00000472789 TNS3Q68CZ2 1445 aa14.65□□□□□ -0.06
SMARCD3-208ENST00000472789 SBNO1A3KN83 1393 aa14.64□□□□□ -0.07
SMARCD3-208ENST00000472789 POLR3AO14802 1390 aaPredicted RBP14.64□□□□□ -0.07
SMARCD3-208ENST00000472789 PUS7Q96PZ0 661 aaKnown RBP14.64□□□□□ -0.07
SMARCD3-208ENST00000472789 NUTM2GQ5VZR2 741 aa14.63□□□□□ -0.07
SMARCD3-208ENST00000472789 HDGFL2Q7Z4V5 671 aaPredicted RBP14.63□□□□□ -0.07
SMARCD3-208ENST00000472789 C8orf37Q96NL8 207 aa14.63□□□□□ -0.07
SMARCD3-208ENST00000472789 ARHGEF10O15013 1369 aa14.62□□□□□ -0.07
SMARCD3-208ENST00000472789 ADAMTS2O95450 1211 aa14.62□□□□□ -0.07
SMARCD3-208ENST00000472789 QTRT2Q9H974 415 aaKnown RBP14.62□□□□□ -0.07
SMARCD3-208ENST00000472789 TERF2IPQ9NYB0 399 aa14.62□□□□□ -0.07
SMARCD3-208ENST00000472789 KTN1Q86UP2 1357 aaKnown RBP14.61□□□□□ -0.07
SMARCD3-208ENST00000472789 RBM6P78332 1123 aaKnown RBP14.61□□□□□ -0.07
SMARCD3-208ENST00000472789 CABLES1Q8TDN4 633 aa14.61□□□□□ -0.07
SMARCD3-208ENST00000472789 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
SMARCD3-208ENST00000472789 USP6P35125 1406 aa14.6□□□□□ -0.07
SMARCD3-208ENST00000472789 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.6□□□□□ -0.07
SMARCD3-208ENST00000472789 ABTB2Q8N961 1025 aa14.6□□□□□ -0.07
SMARCD3-208ENST00000472789 NINLQ9Y2I6 1382 aa14.6□□□□□ -0.07
SMARCD3-208ENST00000472789 TRPM3Q9HCF6 1732 aaPredicted RBP14.58□□□□□ -0.07
SMARCD3-208ENST00000472789 TTC21BQ7Z4L5 1316 aa14.57□□□□□ -0.08
SMARCD3-208ENST00000472789 A0A1W2PP64 1363 aa14.57□□□□□ -0.08
SMARCD3-208ENST00000472789 CPSF1Q10570 1443 aaKnown RBP14.57□□□□□ -0.08
SMARCD3-208ENST00000472789 NLRP6P59044 892 aa14.56□□□□□ -0.08
SMARCD3-208ENST00000472789 NGLY1Q96IV0 654 aa14.56□□□□□ -0.08
SMARCD3-208ENST00000472789 BRD4O60885 1362 aaPredicted RBP14.56□□□□□ -0.08
SMARCD3-208ENST00000472789 COL22A1Q8NFW1 1626 aaPredicted RBP14.55□□□□□ -0.08
SMARCD3-208ENST00000472789 C11orf95C9JLR9 678 aaPredicted RBP14.55□□□□□ -0.08
SMARCD3-208ENST00000472789 NLRP13Q86W25 1043 aa14.55□□□□□ -0.08
SMARCD3-208ENST00000472789 CD163L1Q9NR16 1453 aa14.55□□□□□ -0.08
SMARCD3-208ENST00000472789 AKAP12Q02952 1782 aa14.55□□□□□ -0.08
SMARCD3-208ENST00000472789 TTC21AQ8NDW8 1320 aa14.54□□□□□ -0.08
SMARCD3-208ENST00000472789 ANKRD36BQ8N2N9 1353 aa14.54□□□□□ -0.08
SMARCD3-208ENST00000472789 ALS2Q96Q42 1657 aa14.54□□□□□ -0.08
SMARCD3-208ENST00000472789 EDC4Q6P2E9 1401 aaKnown RBP14.53□□□□□ -0.08
SMARCD3-208ENST00000472789 ZBTB7CA1YPR0 619 aa14.53□□□□□ -0.08
SMARCD3-208ENST00000472789 SOX12O15370 315 aa14.53□□□□□ -0.08
SMARCD3-208ENST00000472789 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
SMARCD3-208ENST00000472789 NME9Q86XW9 330 aa14.53□□□□□ -0.08
SMARCD3-208ENST00000472789 SSH2Q76I76 1423 aa14.52□□□□□ -0.08
SMARCD3-208ENST00000472789 KIF7Q2M1P5 1343 aa14.52□□□□□ -0.08
SMARCD3-208ENST00000472789 USP21Q9UK80 565 aa14.52□□□□□ -0.09
SMARCD3-208ENST00000472789 ZC3H6P61129 1189 aaKnown RBP14.51□□□□□ -0.09
SMARCD3-208ENST00000472789 FNBP4Q8N3X1 1017 aaPredicted RBP14.51□□□□□ -0.09
SMARCD3-208ENST00000472789 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
SMARCD3-208ENST00000472789 MON2Q7Z3U7 1717 aa14.51□□□□□ -0.09
SMARCD3-208ENST00000472789 PRDM11Q9NQV5 511 aa14.5□□□□□ -0.09
SMARCD3-208ENST00000472789 ATRNO75882 1429 aa14.49□□□□□ -0.09
SMARCD3-208ENST00000472789 PANK3Q9H999 370 aa14.49□□□□□ -0.09
SMARCD3-208ENST00000472789 TRPC5Q9UL62 973 aaPredicted RBP14.49□□□□□ -0.09
SMARCD3-208ENST00000472789 NSD3Q9BZ95 1437 aa14.49□□□□□ -0.09
SMARCD3-208ENST00000472789 MYOM1P52179 1685 aa14.49□□□□□ -0.09
SMARCD3-208ENST00000472789 CCDC7Q96M83 1385 aa14.48□□□□□ -0.09
SMARCD3-208ENST00000472789 NRKQ7Z2Y5 1582 aa14.48□□□□□ -0.09
SMARCD3-208ENST00000472789 USP19O94966 1318 aa14.48□□□□□ -0.09
SMARCD3-208ENST00000472789 GCP02774 474 aa14.48□□□□□ -0.09
SMARCD3-208ENST00000472789 CHRNA2Q15822 529 aa14.48□□□□□ -0.09
SMARCD3-208ENST00000472789 PIK3C2AO00443 1686 aa14.48□□□□□ -0.09
SMARCD3-208ENST00000472789 ABCA3Q99758 1704 aa14.47□□□□□ -0.09
SMARCD3-208ENST00000472789 FAM83GA6ND36 823 aa14.47□□□□□ -0.09
SMARCD3-208ENST00000472789 COG3Q96JB2 828 aa14.47□□□□□ -0.09
SMARCD3-208ENST00000472789 CARD14Q9BXL6 1004 aa14.47□□□□□ -0.09
SMARCD3-208ENST00000472789 GGNBP2Q9H3C7 697 aa14.47□□□□□ -0.09
SMARCD3-208ENST00000472789 KIAA0232Q92628 1395 aa14.47□□□□□ -0.09
SMARCD3-208ENST00000472789 WASHC2AQ641Q2 1341 aa14.46□□□□□ -0.09
SMARCD3-208ENST00000472789 DDX10Q13206 875 aaKnown RBP14.46□□□□□ -0.09
SMARCD3-208ENST00000472789 KCNH5Q8NCM2 988 aa14.46□□□□□ -0.09
SMARCD3-208ENST00000472789 BCL9LQ86UU0 1499 aa14.45□□□□□ -0.1
SMARCD3-208ENST00000472789 PHRF1Q9P1Y6 1649 aaKnown RBP14.45□□□□□ -0.1
SMARCD3-208ENST00000472789 CGNL1Q0VF96 1302 aa14.44□□□□□ -0.1
SMARCD3-208ENST00000472789 FYB1O15117 783 aa14.44□□□□□ -0.1
SMARCD3-208ENST00000472789 BTG4Q9NY30 223 aa14.44□□□□□ -0.1
SMARCD3-208ENST00000472789 CCDC9Q9Y3X0 531 aaKnown RBP14.44□□□□□ -0.1
SMARCD3-208ENST00000472789 KNSTRNQ9Y448 316 aa14.44□□□□□ -0.1
SMARCD3-208ENST00000472789 USP31Q70CQ4 1352 aa14.44□□□□□ -0.1
SMARCD3-208ENST00000472789 MARF1Q9Y4F3 1742 aaKnown RBP14.44□□□□□ -0.1
SMARCD3-208ENST00000472789 CRYBG1Q9Y4K1 1723 aa14.44□□□□□ -0.1
SMARCD3-208ENST00000472789 SLIT3O75094 1523 aa14.42□□□□□ -0.1
SMARCD3-208ENST00000472789 UNC5CLQ8IV45 518 aa14.42□□□□□ -0.1
SMARCD3-208ENST00000472789 STRN4Q9NRL3 753 aa14.42□□□□□ -0.1
SMARCD3-208ENST00000472789 EVA1CP58658 441 aa14.41□□□□□ -0.1
SMARCD3-208ENST00000472789 CNGB1Q14028 1251 aaPredicted RBP14.41□□□□□ -0.1
SMARCD3-208ENST00000472789 CPDO75976 1380 aa14.41□□□□□ -0.1
SMARCD3-208ENST00000472789 OVOS2A0A0J9YW53 1432 aa14.41□□□□□ -0.1
SMARCD3-208ENST00000472789 OVOS2Q6IE36 1432 aa14.41□□□□□ -0.1
SMARCD3-208ENST00000472789 CCDC125Q86Z20 511 aa14.4□□□□□ -0.1
SMARCD3-208ENST00000472789 GJD4Q96KN9 370 aaPredicted RBP14.4□□□□□ -0.1
SMARCD3-208ENST00000472789 SLIT2O94813 1529 aa14.4□□□□□ -0.1
SMARCD3-208ENST00000472789 COL14A1Q05707 1796 aaKnown RBP14.39□□□□□ -0.11
SMARCD3-208ENST00000472789 PLCH1Q4KWH8 1693 aa14.39□□□□□ -0.11
SMARCD3-208ENST00000472789 FBLN1P23142 703 aa14.39□□□□□ -0.11
SMARCD3-208ENST00000472789 ARHGEF25Q86VW2 580 aa14.39□□□□□ -0.11
SMARCD3-208ENST00000472789 KIF20BQ96Q89 1820 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms